RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 C15orf54Q8N8G6 183 aa12.87□□□□□ -0.35
HDAC7-227ENST00000548080 TUBA4BQ9H853 241 aa12.87□□□□□ -0.35
HDAC7-227ENST00000548080 C19orf73Q9NVV2 129 aa12.87□□□□□ -0.35
HDAC7-227ENST00000548080 ZNF492Q9P255 531 aa12.87□□□□□ -0.35
HDAC7-227ENST00000548080 F6UB75 175 aa12.86□□□□□ -0.35
HDAC7-227ENST00000548080 HIST1H1AQ02539 215 aaPredicted RBP12.86□□□□□ -0.35
HDAC7-227ENST00000548080 ODF3L2Q3SX64 289 aa12.86□□□□□ -0.35
HDAC7-227ENST00000548080 ZC2HC1AQ96GY0 325 aa12.86□□□□□ -0.35
HDAC7-227ENST00000548080 C8orf49Q96NF6 230 aa12.86□□□□□ -0.35
HDAC7-227ENST00000548080 B9D2Q9BPU9 175 aa12.86□□□□□ -0.35
HDAC7-227ENST00000548080 RNASE7Q9H1E1 156 aaKnown RBP12.86□□□□□ -0.35
HDAC7-227ENST00000548080 SRD5A3Q9H8P0 318 aa12.86□□□□□ -0.35
HDAC7-227ENST00000548080 ZNF124Q15973 351 aa12.85□□□□□ -0.35
HDAC7-227ENST00000548080 IBA57Q5T440 356 aaKnown RBP12.85□□□□□ -0.35
HDAC7-227ENST00000548080 NUDT10Q8NFP7 164 aa12.85□□□□□ -0.35
HDAC7-227ENST00000548080 NUDT11Q96G61 164 aa12.85□□□□□ -0.35
HDAC7-227ENST00000548080 LENEPQ9Y5L5 61 aa12.85□□□□□ -0.35
HDAC7-227ENST00000548080 COL7A1Q02388 2944 aa12.85□□□□□ -0.35
HDAC7-227ENST00000548080 DNAH9Q9NYC9 4486 aa12.85□□□□□ -0.35
HDAC7-227ENST00000548080 CT45A10P0DMU9 189 aa12.85□□□□□ -0.35
HDAC7-227ENST00000548080 LINC00322Q6ZN03 302 aaPredicted RBP12.85□□□□□ -0.35
HDAC7-227ENST00000548080 SBSPONQ8IVN8 264 aa12.85□□□□□ -0.35
HDAC7-227ENST00000548080 DAZAP1Q96EP5 407 aaKnown RBP12.85□□□□□ -0.35
HDAC7-227ENST00000548080 V9GYV3 84 aa12.85□□□□□ -0.35
HDAC7-227ENST00000548080 A0A0J9YX75 114 aa12.84□□□□□ -0.35
HDAC7-227ENST00000548080 C19orf71A6NCJ1 209 aa12.84□□□□□ -0.35
HDAC7-227ENST00000548080 GATCO43716 136 aaKnown RBP12.84□□□□□ -0.35
HDAC7-227ENST00000548080 DEFB131AP59861 70 aa12.84□□□□□ -0.35
HDAC7-227ENST00000548080 SMUG1Q53HV7 270 aa12.84□□□□□ -0.35
HDAC7-227ENST00000548080 EBLN2Q6P2I7 272 aa12.84□□□□□ -0.35
HDAC7-227ENST00000548080 APRG1Q8IVJ8 170 aa12.84□□□□□ -0.35
HDAC7-227ENST00000548080 RBMY1BA6NDE4 496 aaKnown RBP12.83□□□□□ -0.36
HDAC7-227ENST00000548080 RBMY1EA6NEQ0 496 aaKnown RBP12.83□□□□□ -0.36
HDAC7-227ENST00000548080 ZNF705GA8MUZ8 300 aaPredicted RBP12.83□□□□□ -0.36
HDAC7-227ENST00000548080 RBMY1DP0C7P1 496 aaKnown RBP12.83□□□□□ -0.36
HDAC7-227ENST00000548080 CRIP1P50238 77 aa12.83□□□□□ -0.36
HDAC7-227ENST00000548080 FOXI2Q6ZQN5 318 aa12.83□□□□□ -0.36
HDAC7-227ENST00000548080 DUSP14O95147 198 aaKnown RBP12.82□□□□□ -0.36
HDAC7-227ENST00000548080 GDF5OSQ5U4N7 250 aa12.82□□□□□ -0.36
HDAC7-227ENST00000548080 IMMP2LQ96T52 175 aa12.82□□□□□ -0.36
HDAC7-227ENST00000548080 SAV1Q9H4B6 383 aaPredicted RBP12.82□□□□□ -0.36
HDAC7-227ENST00000548080 MAP6D1Q9H9H5 199 aa12.82□□□□□ -0.36
HDAC7-227ENST00000548080 TRBV7-9A0A0J9YWB2 115 aa12.81□□□□□ -0.36
HDAC7-227ENST00000548080 P01737 135 aa12.81□□□□□ -0.36
HDAC7-227ENST00000548080 S100PP25815 95 aa12.81□□□□□ -0.36
HDAC7-227ENST00000548080 CMC4P56277 68 aaPredicted RBP12.81□□□□□ -0.36
HDAC7-227ENST00000548080 FAM162BQ5T6X4 162 aa12.81□□□□□ -0.36
HDAC7-227ENST00000548080 FAM19A4Q96LR4 140 aa12.81□□□□□ -0.36
HDAC7-227ENST00000548080 IL36BQ9NZH7 164 aa12.81□□□□□ -0.36
HDAC7-227ENST00000548080 URGCP-MRPS24S4R325 110 aa12.81□□□□□ -0.36
HDAC7-227ENST00000548080 PFN1P07737 140 aaKnown RBP12.8□□□□□ -0.36
HDAC7-227ENST00000548080 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.8□□□□□ -0.36
HDAC7-227ENST00000548080 OR4B1Q8NGF8 309 aa12.8□□□□□ -0.36
HDAC7-227ENST00000548080 YPEL4Q96NS1 127 aa12.8□□□□□ -0.36
HDAC7-227ENST00000548080 RPP21Q9H633 154 aaKnown RBP12.8□□□□□ -0.36
HDAC7-227ENST00000548080 COLCA2A8K830 154 aa12.79□□□□□ -0.36
HDAC7-227ENST00000548080 A8MZ25 164 aa12.79□□□□□ -0.36
HDAC7-227ENST00000548080 SH2D1AO60880 128 aa12.79□□□□□ -0.36
HDAC7-227ENST00000548080 ZNF80P51504 273 aaPredicted RBP12.79□□□□□ -0.36
HDAC7-227ENST00000548080 ELOBQ15370 118 aa12.79□□□□□ -0.36
HDAC7-227ENST00000548080 KCNIP4Q6PIL6 250 aa12.79□□□□□ -0.36
HDAC7-227ENST00000548080 KNCNA6PVL3 124 aa12.78□□□□□ -0.36
HDAC7-227ENST00000548080 FABP5P3A8MUU1 101 aa12.78□□□□□ -0.36
HDAC7-227ENST00000548080 CRISP2P16562 243 aa12.78□□□□□ -0.36
HDAC7-227ENST00000548080 CT83Q5H943 113 aa12.78□□□□□ -0.36
HDAC7-227ENST00000548080 ZFAND2AQ8N6M9 145 aa12.78□□□□□ -0.36
HDAC7-227ENST00000548080 ODF3Q96PU9 254 aa12.78□□□□□ -0.36
HDAC7-227ENST00000548080 TENM3Q9P273 2699 aa12.78□□□□□ -0.36
HDAC7-227ENST00000548080 AGRNO00468 2067 aa12.78□□□□□ -0.36
HDAC7-227ENST00000548080 HLA-DRB4P13762 266 aa12.78□□□□□ -0.36
HDAC7-227ENST00000548080 RPL35AP18077 110 aaKnown RBP12.78□□□□□ -0.36
HDAC7-227ENST00000548080 LEPP41159 167 aa12.78□□□□□ -0.36
HDAC7-227ENST00000548080 ACTL10Q5JWF8 245 aa12.78□□□□□ -0.36
HDAC7-227ENST00000548080 RETNQ9HD89 108 aa12.78□□□□□ -0.36
HDAC7-227ENST00000548080 HLA-DRB4X5D2U9 266 aa12.78□□□□□ -0.36
HDAC7-227ENST00000548080 CA1P00915 261 aaPredicted RBP12.77□□□□□ -0.37
HDAC7-227ENST00000548080 FAM3BP58499 235 aaPredicted RBP12.77□□□□□ -0.37
HDAC7-227ENST00000548080 OR2D3Q8NGH3 330 aa12.77□□□□□ -0.37
HDAC7-227ENST00000548080 TSKUQ8WUA8 353 aa12.77□□□□□ -0.37
HDAC7-227ENST00000548080 NBEAL2Q6ZNJ1 2754 aa12.76□□□□□ -0.37
HDAC7-227ENST00000548080 TGIF2-C20orf24A0A0A6YYL0 155 aa12.76□□□□□ -0.37
HDAC7-227ENST00000548080 SMIM27A0A1W2PRY6 76 aa12.76□□□□□ -0.37
HDAC7-227ENST00000548080 A8MTW9 85 aa12.76□□□□□ -0.37
HDAC7-227ENST00000548080 A8MWL6 223 aa12.76□□□□□ -0.37
HDAC7-227ENST00000548080 H3BMM0 161 aa12.76□□□□□ -0.37
HDAC7-227ENST00000548080 IGKV3-20P01619 116 aa12.76□□□□□ -0.37
HDAC7-227ENST00000548080 GPX1P07203 203 aa12.76□□□□□ -0.37
HDAC7-227ENST00000548080 PRR9Q5T870 116 aa12.76□□□□□ -0.37
HDAC7-227ENST00000548080 FAM110AQ9BQ89 295 aa12.76□□□□□ -0.37
HDAC7-227ENST00000548080 TRBV24-1A0A075B6N3 115 aa12.75□□□□□ -0.37
HDAC7-227ENST00000548080 TMEM189A5PLL7 270 aa12.75□□□□□ -0.37
HDAC7-227ENST00000548080 J3KRW8 73 aa12.75□□□□□ -0.37
HDAC7-227ENST00000548080 CXCL1P09341 107 aa12.75□□□□□ -0.37
HDAC7-227ENST00000548080 TSPOP30536 169 aa12.75□□□□□ -0.37
HDAC7-227ENST00000548080 PYGO2Q9BRQ0 406 aa12.75□□□□□ -0.37
HDAC7-227ENST00000548080 HUWE1Q7Z6Z7 4374 aaKnown RBP12.75□□□□□ -0.37
HDAC7-227ENST00000548080 TRAV9-1A0A075B6T8 112 aa12.74□□□□□ -0.37
HDAC7-227ENST00000548080 LOC102724200A0A096LPH7 203 aaPredicted RBP12.74□□□□□ -0.37
HDAC7-227ENST00000548080 A0A1W2PPQ1 181 aa12.74□□□□□ -0.37
HDAC7-227ENST00000548080 KLLNB2CW77 178 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms