RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 PRELID1Q9Y255 219 aa8.9□□□□□ -0.98
CCDC59-202ENST00000547758 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.89□□□□□ -0.99
CCDC59-202ENST00000547758 TRAV8-6A0A0B4J262 113 aa8.89□□□□□ -0.99
CCDC59-202ENST00000547758 ARL16Q0P5N6 197 aa8.89□□□□□ -0.99
CCDC59-202ENST00000547758 TMEM78Q5T7P6 136 aa8.89□□□□□ -0.99
CCDC59-202ENST00000547758 Q6ZRG5 221 aa8.89□□□□□ -0.99
CCDC59-202ENST00000547758 SLC25A21Q9BQT8 299 aaPredicted RBP8.89□□□□□ -0.99
CCDC59-202ENST00000547758 GGACTQ9BVM4 153 aa8.89□□□□□ -0.99
CCDC59-202ENST00000547758 TM2D2Q9BX73 214 aa8.89□□□□□ -0.99
CCDC59-202ENST00000547758 IGKV2-40A0A087WW87 121 aaPredicted RBP8.88□□□□□ -0.99
CCDC59-202ENST00000547758 TRAV4A0A0B4J268 109 aa8.88□□□□□ -0.99
CCDC59-202ENST00000547758 TSC22D2O75157 780 aa8.88□□□□□ -0.99
CCDC59-202ENST00000547758 NDUFB4O95168 129 aa8.88□□□□□ -0.99
CCDC59-202ENST00000547758 IGKV2D-40P01614 121 aaPredicted RBP8.88□□□□□ -0.99
CCDC59-202ENST00000547758 IGHV3-30P01768 117 aa8.88□□□□□ -0.99
CCDC59-202ENST00000547758 IGHV3-33P01772 117 aa8.88□□□□□ -0.99
CCDC59-202ENST00000547758 IGHV3-30-3P0DP02 117 aa8.88□□□□□ -0.99
CCDC59-202ENST00000547758 IGHV3-30-5P0DP03 117 aa8.88□□□□□ -0.99
CCDC59-202ENST00000547758 HIST1H1EP10412 219 aaKnown RBP8.88□□□□□ -0.99
CCDC59-202ENST00000547758 CAMLGP49069 296 aa8.88□□□□□ -0.99
CCDC59-202ENST00000547758 LRP2P98164 4655 aa8.88□□□□□ -0.99
CCDC59-202ENST00000547758 LAGE3Q14657 143 aa8.88□□□□□ -0.99
CCDC59-202ENST00000547758 ZNF846Q147U1 533 aa8.88□□□□□ -0.99
CCDC59-202ENST00000547758 LINC01620Q4KN68 170 aa8.88□□□□□ -0.99
CCDC59-202ENST00000547758 OR10J3Q5JRS4 329 aa8.88□□□□□ -0.99
CCDC59-202ENST00000547758 EXOC3-AS1Q8N2X6 119 aa8.88□□□□□ -0.99
CCDC59-202ENST00000547758 OR1L4Q8NGR5 311 aa8.88□□□□□ -0.99
CCDC59-202ENST00000547758 MCFD2Q8NI22 146 aa8.88□□□□□ -0.99
CCDC59-202ENST00000547758 SOSTQ9BQB4 213 aa8.88□□□□□ -0.99
CCDC59-202ENST00000547758 CHAC1Q9BUX1 264 aa8.88□□□□□ -0.99
CCDC59-202ENST00000547758 LECT2O14960 151 aa8.87□□□□□ -0.99
CCDC59-202ENST00000547758 RS1O15537 224 aa8.87□□□□□ -0.99
CCDC59-202ENST00000547758 SCGB1D2O95969 90 aa8.87□□□□□ -0.99
CCDC59-202ENST00000547758 TNFSF8P32971 234 aa8.87□□□□□ -0.99
CCDC59-202ENST00000547758 TAS2R30P59541 319 aa8.87□□□□□ -0.99
CCDC59-202ENST00000547758 PDE6HQ13956 83 aa8.87□□□□□ -0.99
CCDC59-202ENST00000547758 SPCS2Q15005 226 aa8.87□□□□□ -0.99
CCDC59-202ENST00000547758 TDRG1Q3Y452 100 aa8.87□□□□□ -0.99
CCDC59-202ENST00000547758 MUC21Q5SSG8 566 aa8.87□□□□□ -0.99
CCDC59-202ENST00000547758 MIC13Q5XKP0 118 aa8.87□□□□□ -0.99
CCDC59-202ENST00000547758 PFDN5Q99471 154 aa8.87□□□□□ -0.99
CCDC59-202ENST00000547758 SPXQ9BT56 116 aa8.87□□□□□ -0.99
CCDC59-202ENST00000547758 ZNF492Q9P255 531 aa8.87□□□□□ -0.99
CCDC59-202ENST00000547758 TIMM9Q9Y5J7 89 aa8.87□□□□□ -0.99
CCDC59-202ENST00000547758 AP3S2P59780 193 aa8.86□□□□□ -0.99
CCDC59-202ENST00000547758 ASAH1Q13510 395 aa8.86□□□□□ -0.99
CCDC59-202ENST00000547758 RAB31Q13636 194 aa8.86□□□□□ -0.99
CCDC59-202ENST00000547758 NRARPQ7Z6K4 114 aa8.86□□□□□ -0.99
CCDC59-202ENST00000547758 TOMM5Q8N4H5 51 aa8.86□□□□□ -0.99
CCDC59-202ENST00000547758 C12orf45Q8N5I9 185 aaPredicted RBP8.86□□□□□ -0.99
CCDC59-202ENST00000547758 OR4C5Q8NGB2 326 aa8.86□□□□□ -0.99
CCDC59-202ENST00000547758 TRIM63Q969Q1 353 aa8.86□□□□□ -0.99
CCDC59-202ENST00000547758 KRTAP4-2Q9BYR5 136 aa8.86□□□□□ -0.99
CCDC59-202ENST00000547758 AAMDCQ9H7C9 122 aa8.86□□□□□ -0.99
CCDC59-202ENST00000547758 TMEM14CQ9P0S9 112 aa8.86□□□□□ -0.99
CCDC59-202ENST00000547758 TNXBP22105 4242 aa8.86□□□□□ -0.99
CCDC59-202ENST00000547758 C9orf170A2RU37 121 aa8.85□□□□□ -0.99
CCDC59-202ENST00000547758 FABP12A6NFH5 140 aa8.85□□□□□ -0.99
CCDC59-202ENST00000547758 PYYP10082 97 aa8.85□□□□□ -0.99
CCDC59-202ENST00000547758 UBE2MP61081 183 aaKnown RBP8.85□□□□□ -0.99
CCDC59-202ENST00000547758 TMEM183BQ1AE95 376 aa8.85□□□□□ -0.99
CCDC59-202ENST00000547758 FAM122CQ6P4D5 195 aa8.85□□□□□ -0.99
CCDC59-202ENST00000547758 TMEM183AQ8IXX5 376 aa8.85□□□□□ -0.99
CCDC59-202ENST00000547758 Q8TAT8 98 aa8.85□□□□□ -0.99
CCDC59-202ENST00000547758 CIRBP-AS1Q8TBR5 109 aa8.85□□□□□ -0.99
CCDC59-202ENST00000547758 TRGV11A0A075B6L2 103 aa8.84□□□□□ -0.99
CCDC59-202ENST00000547758 TRBV7-9A0A0J9YWB2 115 aa8.84□□□□□ -0.99
CCDC59-202ENST00000547758 IGLV2-8P01709 118 aa8.84□□□□□ -0.99
CCDC59-202ENST00000547758 PFN1P07737 140 aaKnown RBP8.84□□□□□ -0.99
CCDC59-202ENST00000547758 GATA1P15976 413 aaPredicted RBP8.84□□□□□ -0.99
CCDC59-202ENST00000547758 ZNF138P52744 262 aa8.84□□□□□ -0.99
CCDC59-202ENST00000547758 LELP1Q5T871 98 aa8.84□□□□□ -0.99
CCDC59-202ENST00000547758 IGHV3-16A0A0C4DH30 117 aa8.83□□□□□ -1
CCDC59-202ENST00000547758 C7orf66A4D0T2 115 aa8.83□□□□□ -1
CCDC59-202ENST00000547758 ZNF266Q14584 549 aa8.83□□□□□ -1
CCDC59-202ENST00000547758 IAH1Q2TAA2 248 aaPredicted RBP8.83□□□□□ -1
CCDC59-202ENST00000547758 ACOT6Q3I5F7 207 aaPredicted RBP8.83□□□□□ -1
CCDC59-202ENST00000547758 DYNC2LI1Q8TCX1 351 aa8.83□□□□□ -1
CCDC59-202ENST00000547758 SLC39A9Q9NUM3 307 aa8.83□□□□□ -1
CCDC59-202ENST00000547758 TRAV8-3A0A0A6YYJ7 113 aa8.82□□□□□ -1
CCDC59-202ENST00000547758 RBFOX3A6NFN3 312 aa8.82□□□□□ -1
CCDC59-202ENST00000547758 M0R2P5 195 aa8.82□□□□□ -1
CCDC59-202ENST00000547758 SMIM18P0DKX4 95 aa8.82□□□□□ -1
CCDC59-202ENST00000547758 RPL29P47914 159 aaKnown RBP8.82□□□□□ -1
CCDC59-202ENST00000547758 BAK1Q16611 211 aa8.82□□□□□ -1
CCDC59-202ENST00000547758 FAM159AQ6UWV7 190 aa8.82□□□□□ -1
CCDC59-202ENST00000547758 GPN1Q9HCN4 374 aaPredicted RBP8.82□□□□□ -1
CCDC59-202ENST00000547758 WDR83OSQ9Y284 106 aa8.82□□□□□ -1
CCDC59-202ENST00000547758 HNRNPA3P51991 378 aaKnown RBP8.81□□□□□ -1
CCDC59-202ENST00000547758 RPL37AP61513 92 aaKnown RBP8.81□□□□□ -1
CCDC59-202ENST00000547758 PYDC2Q56P42 97 aa8.81□□□□□ -1
CCDC59-202ENST00000547758 Q6AWC8 147 aa8.81□□□□□ -1
CCDC59-202ENST00000547758 SLC25A29Q8N8R3 303 aa8.81□□□□□ -1
CCDC59-202ENST00000547758 DEDD2Q8WXF8 326 aa8.81□□□□□ -1
CCDC59-202ENST00000547758 BAALCQ8WXS3 180 aa8.81□□□□□ -1
CCDC59-202ENST00000547758 UQCC1Q9NVA1 299 aa8.81□□□□□ -1
CCDC59-202ENST00000547758 GSKIPQ9P0R6 139 aa8.81□□□□□ -1
CCDC59-202ENST00000547758 MBPP02686 304 aaPredicted RBP8.8□□□□□ -1
CCDC59-202ENST00000547758 PRADC1Q9BSG0 188 aa8.8□□□□□ -1
CCDC59-202ENST00000547758 SLC25A2Q9BXI2 301 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms