RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 IGKV2-40A0A087WW87 121 aaPredicted RBP8.42□□□□□ -1.06
SCAF11-208ENST00000546534 IGKV2D-40P01614 121 aaPredicted RBP8.42□□□□□ -1.06
SCAF11-208ENST00000546534 FAUP35544 74 aaKnown RBP8.42□□□□□ -1.06
SCAF11-208ENST00000546534 TIRAPP58753 221 aa8.42□□□□□ -1.06
SCAF11-208ENST00000546534 MCFD2Q8NI22 146 aa8.42□□□□□ -1.06
SCAF11-208ENST00000546534 RASL10AQ92737 203 aa8.42□□□□□ -1.06
SCAF11-208ENST00000546534 SOSTQ9BQB4 213 aa8.42□□□□□ -1.06
SCAF11-208ENST00000546534 SLC25A31Q9H0C2 315 aa8.42□□□□□ -1.06
SCAF11-208ENST00000546534 LECT2O14960 151 aa8.41□□□□□ -1.06
SCAF11-208ENST00000546534 IGHV3-30P01768 117 aa8.41□□□□□ -1.06
SCAF11-208ENST00000546534 IGHV3-33P01772 117 aa8.41□□□□□ -1.06
SCAF11-208ENST00000546534 IGHV3-30-3P0DP02 117 aa8.41□□□□□ -1.06
SCAF11-208ENST00000546534 IGHV3-30-5P0DP03 117 aa8.41□□□□□ -1.06
SCAF11-208ENST00000546534 CAMLGP49069 296 aa8.41□□□□□ -1.06
SCAF11-208ENST00000546534 PPT1P50897 306 aa8.41□□□□□ -1.06
SCAF11-208ENST00000546534 MUC21Q5SSG8 566 aa8.41□□□□□ -1.06
SCAF11-208ENST00000546534 MIC13Q5XKP0 118 aa8.41□□□□□ -1.06
SCAF11-208ENST00000546534 Q6ZRG5 221 aa8.41□□□□□ -1.06
SCAF11-208ENST00000546534 SH2D6Q7Z4S9 175 aa8.41□□□□□ -1.06
SCAF11-208ENST00000546534 EXOC3-AS1Q8N2X6 119 aa8.41□□□□□ -1.06
SCAF11-208ENST00000546534 NHLRC2Q8NBF2 726 aa8.41□□□□□ -1.06
SCAF11-208ENST00000546534 SLC25A21Q9BQT8 299 aaPredicted RBP8.41□□□□□ -1.06
SCAF11-208ENST00000546534 GGACTQ9BVM4 153 aa8.41□□□□□ -1.06
SCAF11-208ENST00000546534 SRRQ9GZT4 340 aa8.41□□□□□ -1.06
SCAF11-208ENST00000546534 PRELID1Q9Y255 219 aa8.41□□□□□ -1.06
SCAF11-208ENST00000546534 FAT3Q8TDW7 4589 aa8.4□□□□□ -1.06
SCAF11-208ENST00000546534 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.4□□□□□ -1.06
SCAF11-208ENST00000546534 TSC22D2O75157 780 aa8.4□□□□□ -1.06
SCAF11-208ENST00000546534 TAS2R30P59541 319 aa8.4□□□□□ -1.06
SCAF11-208ENST00000546534 TMEM78Q5T7P6 136 aa8.4□□□□□ -1.06
SCAF11-208ENST00000546534 OR1L4Q8NGR5 311 aa8.4□□□□□ -1.06
SCAF11-208ENST00000546534 TM2D2Q9BX73 214 aa8.4□□□□□ -1.06
SCAF11-208ENST00000546534 ZNF492Q9P255 531 aa8.4□□□□□ -1.06
SCAF11-208ENST00000546534 TIMM9Q9Y5J7 89 aa8.4□□□□□ -1.06
SCAF11-208ENST00000546534 TRAV8-6A0A0B4J262 113 aa8.39□□□□□ -1.07
SCAF11-208ENST00000546534 TRAV4A0A0B4J268 109 aa8.39□□□□□ -1.07
SCAF11-208ENST00000546534 C9orf170A2RU37 121 aa8.39□□□□□ -1.07
SCAF11-208ENST00000546534 FABP12A6NFH5 140 aa8.39□□□□□ -1.07
SCAF11-208ENST00000546534 SCGB1D2O95969 90 aa8.39□□□□□ -1.07
SCAF11-208ENST00000546534 HIST1H1EP10412 219 aaKnown RBP8.39□□□□□ -1.07
SCAF11-208ENST00000546534 TNFSF8P32971 234 aa8.39□□□□□ -1.07
SCAF11-208ENST00000546534 ZNF846Q147U1 533 aa8.39□□□□□ -1.07
SCAF11-208ENST00000546534 OR10J3Q5JRS4 329 aa8.39□□□□□ -1.07
SCAF11-208ENST00000546534 NRARPQ7Z6K4 114 aa8.39□□□□□ -1.07
SCAF11-208ENST00000546534 TOMM5Q8N4H5 51 aa8.39□□□□□ -1.07
SCAF11-208ENST00000546534 TRIM63Q969Q1 353 aa8.39□□□□□ -1.07
SCAF11-208ENST00000546534 SPXQ9BT56 116 aa8.39□□□□□ -1.07
SCAF11-208ENST00000546534 CHAC1Q9BUX1 264 aa8.39□□□□□ -1.07
SCAF11-208ENST00000546534 SMIM18P0DKX4 95 aa8.38□□□□□ -1.07
SCAF11-208ENST00000546534 PYYP10082 97 aa8.38□□□□□ -1.07
SCAF11-208ENST00000546534 AP3S2P59780 193 aa8.38□□□□□ -1.07
SCAF11-208ENST00000546534 RAB31Q13636 194 aa8.38□□□□□ -1.07
SCAF11-208ENST00000546534 PDE6HQ13956 83 aa8.38□□□□□ -1.07
SCAF11-208ENST00000546534 TMEM183BQ1AE95 376 aa8.38□□□□□ -1.07
SCAF11-208ENST00000546534 FAM122CQ6P4D5 195 aa8.38□□□□□ -1.07
SCAF11-208ENST00000546534 TMEM183AQ8IXX5 376 aa8.38□□□□□ -1.07
SCAF11-208ENST00000546534 C12orf45Q8N5I9 185 aaPredicted RBP8.38□□□□□ -1.07
SCAF11-208ENST00000546534 OR4C5Q8NGB2 326 aa8.38□□□□□ -1.07
SCAF11-208ENST00000546534 Q8TAT8 98 aa8.38□□□□□ -1.07
SCAF11-208ENST00000546534 CIRBP-AS1Q8TBR5 109 aa8.38□□□□□ -1.07
SCAF11-208ENST00000546534 DYNC2LI1Q8TCX1 351 aa8.38□□□□□ -1.07
SCAF11-208ENST00000546534 PFDN5Q99471 154 aa8.38□□□□□ -1.07
SCAF11-208ENST00000546534 TMEM14CQ9P0S9 112 aa8.38□□□□□ -1.07
SCAF11-208ENST00000546534 RNF213Q63HN8 5207 aa8.37□□□□□ -1.07
SCAF11-208ENST00000546534 IGHV3-16A0A0C4DH30 117 aa8.37□□□□□ -1.07
SCAF11-208ENST00000546534 C7orf66A4D0T2 115 aa8.37□□□□□ -1.07
SCAF11-208ENST00000546534 ZNF138P52744 262 aa8.37□□□□□ -1.07
SCAF11-208ENST00000546534 UBE2MP61081 183 aaKnown RBP8.37□□□□□ -1.07
SCAF11-208ENST00000546534 LAGE3Q14657 143 aa8.37□□□□□ -1.07
SCAF11-208ENST00000546534 IAH1Q2TAA2 248 aaPredicted RBP8.37□□□□□ -1.07
SCAF11-208ENST00000546534 LCE1DQ5T752 114 aa8.37□□□□□ -1.07
SCAF11-208ENST00000546534 AAMDCQ9H7C9 122 aa8.37□□□□□ -1.07
SCAF11-208ENST00000546534 SLC39A9Q9NUM3 307 aa8.37□□□□□ -1.07
SCAF11-208ENST00000546534 GATA1P15976 413 aaPredicted RBP8.36□□□□□ -1.07
SCAF11-208ENST00000546534 ZNF266Q14584 549 aa8.36□□□□□ -1.07
SCAF11-208ENST00000546534 TDRG1Q3Y452 100 aa8.36□□□□□ -1.07
SCAF11-208ENST00000546534 GSKIPQ9P0R6 139 aa8.36□□□□□ -1.07
SCAF11-208ENST00000546534 WDR83OSQ9Y284 106 aa8.36□□□□□ -1.07
SCAF11-208ENST00000546534 TRGV11A0A075B6L2 103 aa8.35□□□□□ -1.07
SCAF11-208ENST00000546534 TRBV7-9A0A0J9YWB2 115 aa8.35□□□□□ -1.07
SCAF11-208ENST00000546534 MBPP02686 304 aaPredicted RBP8.35□□□□□ -1.07
SCAF11-208ENST00000546534 PFN1P07737 140 aaKnown RBP8.35□□□□□ -1.07
SCAF11-208ENST00000546534 RPL29P47914 159 aaKnown RBP8.35□□□□□ -1.07
SCAF11-208ENST00000546534 LINC00310P59036 64 aa8.35□□□□□ -1.07
SCAF11-208ENST00000546534 PYDC2Q56P42 97 aa8.35□□□□□ -1.07
SCAF11-208ENST00000546534 LELP1Q5T871 98 aa8.35□□□□□ -1.07
SCAF11-208ENST00000546534 BAALCQ8WXS3 180 aa8.35□□□□□ -1.07
SCAF11-208ENST00000546534 RBFOX3A6NFN3 312 aa8.34□□□□□ -1.07
SCAF11-208ENST00000546534 M0R2P5 195 aa8.34□□□□□ -1.07
SCAF11-208ENST00000546534 RS1O15537 224 aa8.34□□□□□ -1.07
SCAF11-208ENST00000546534 IGLV2-8P01709 118 aa8.34□□□□□ -1.07
SCAF11-208ENST00000546534 HNRNPA3P51991 378 aaKnown RBP8.34□□□□□ -1.07
SCAF11-208ENST00000546534 ASAH1Q13510 395 aa8.34□□□□□ -1.07
SCAF11-208ENST00000546534 BAK1Q16611 211 aa8.34□□□□□ -1.07
SCAF11-208ENST00000546534 FAM159AQ6UWV7 190 aa8.34□□□□□ -1.07
SCAF11-208ENST00000546534 SLC25A29Q8N8R3 303 aa8.34□□□□□ -1.07
SCAF11-208ENST00000546534 SLIRPQ9GZT3 109 aaKnown RBP8.34□□□□□ -1.07
SCAF11-208ENST00000546534 GPN1Q9HCN4 374 aaPredicted RBP8.34□□□□□ -1.07
SCAF11-208ENST00000546534 UQCC1Q9NVA1 299 aa8.34□□□□□ -1.07
SCAF11-208ENST00000546534 FLVCR2Q9UPI3 526 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms