RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	PRORSD1P	A6NEY8	169 aa		0.1	□□□□□ -2.39
RAP1B-231	ENST00000544639	ARL5C	A6NH57	179 aa		0.1	□□□□□ -2.39
RAP1B-231	ENST00000544639	BBIP1	A8MTZ0	92 aa		0.1	□□□□□ -2.39
RAP1B-231	ENST00000544639	G0S2	P27469	103 aa		0.1	□□□□□ -2.39
RAP1B-231	ENST00000544639	ASB16-AS1	Q495Z4	193 aa		0.1	□□□□□ -2.39
RAP1B-231	ENST00000544639	C3orf62	Q6ZUJ4	267 aa		0.1	□□□□□ -2.39
RAP1B-231	ENST00000544639	LINC00305	Q7Z4B0	112 aa		0.1	□□□□□ -2.39
RAP1B-231	ENST00000544639	DEFB132	Q7Z7B7	95 aa		0.1	□□□□□ -2.39
RAP1B-231	ENST00000544639	STX12	Q86Y82	276 aa		0.1	□□□□□ -2.39
RAP1B-231	ENST00000544639	ARL17A	Q8IVW1	177 aa		0.1	□□□□□ -2.39
RAP1B-231	ENST00000544639	MPC1	Q9Y5U8	109 aa		0.1	□□□□□ -2.39
RAP1B-231	ENST00000544639	ATG2A	Q2TAZ0	1938 aa		0.1	□□□□□ -2.39
RAP1B-231	ENST00000544639	USP54	Q70EL1	1684 aa		0.1	□□□□□ -2.39
RAP1B-231	ENST00000544639	ZFYVE26	Q68DK2	2539 aa		0.1	□□□□□ -2.39
RAP1B-231	ENST00000544639	DLC1	Q96QB1	1528 aa		0.09	□□□□□ -2.39
RAP1B-231	ENST00000544639	NBDY	A0A0U1RRE5	68 aa		0.09	□□□□□ -2.4
RAP1B-231	ENST00000544639	GNG10	P50151	68 aa		0.09	□□□□□ -2.4
RAP1B-231	ENST00000544639	DNAJB13	P59910	316 aa		0.09	□□□□□ -2.4
RAP1B-231	ENST00000544639	RPL37	P61927	97 aa	Known RBP	0.09	□□□□□ -2.4
RAP1B-231	ENST00000544639	FXYD3	Q14802	87 aa		0.09	□□□□□ -2.4
RAP1B-231	ENST00000544639	CCSMST1	Q4G0I0	132 aa		0.09	□□□□□ -2.4
RAP1B-231	ENST00000544639	CCDC32	Q9BV29	185 aa		0.09	□□□□□ -2.4
RAP1B-231	ENST00000544639	MRPL35	Q9NZE8	188 aa	Known RBP	0.09	□□□□□ -2.4
RAP1B-231	ENST00000544639	FGD6	Q6ZV73	1430 aa		0.09	□□□□□ -2.4
RAP1B-231	ENST00000544639	TCOF1	Q13428	1488 aa	Known RBP	0.09	□□□□□ -2.4
RAP1B-231	ENST00000544639	IGF2R	P11717	2491 aa		0.08	□□□□□ -2.4
RAP1B-231	ENST00000544639	TRAV13-1	A0A0B4J241	112 aa		0.08	□□□□□ -2.4
RAP1B-231	ENST00000544639		A0A1W2PRE2	83 aa		0.08	□□□□□ -2.4
RAP1B-231	ENST00000544639	ZNF56	Q15929	161 aa		0.08	□□□□□ -2.4
RAP1B-231	ENST00000544639	TEX29	Q8N6K0	151 aa		0.08	□□□□□ -2.4
RAP1B-231	ENST00000544639	C19orf12	Q9NSK7	152 aa		0.08	□□□□□ -2.4
RAP1B-231	ENST00000544639	MRPL36	Q9P0J6	103 aa	Known RBP	0.08	□□□□□ -2.4
RAP1B-231	ENST00000544639	IGSF10	Q6WRI0	2623 aa		0.07	□□□□□ -2.4
RAP1B-231	ENST00000544639	PIEZO1	Q92508	2521 aa		0.07	□□□□□ -2.4
RAP1B-231	ENST00000544639	LOC101927531	A0A1B0GV80	90 aa		0.07	□□□□□ -2.4
RAP1B-231	ENST00000544639	LOC107986453	A0A1B0GWG9	222 aa		0.07	□□□□□ -2.4
RAP1B-231	ENST00000544639		H3BMG7	143 aa		0.07	□□□□□ -2.4
RAP1B-231	ENST00000544639	IGF2	P01344	180 aa		0.07	□□□□□ -2.4
RAP1B-231	ENST00000544639	PPP1R2P3	Q6NXS1	205 aa		0.07	□□□□□ -2.4
RAP1B-231	ENST00000544639	HRCT1	Q6UXD1	115 aa		0.07	□□□□□ -2.4
RAP1B-231	ENST00000544639	C5orf56	Q8N8D9	126 aa		0.07	□□□□□ -2.4
RAP1B-231	ENST00000544639	MORN4	Q8NDC4	146 aa		0.07	□□□□□ -2.4
RAP1B-231	ENST00000544639	LXN	Q9BS40	222 aa		0.07	□□□□□ -2.4
RAP1B-231	ENST00000544639	PCBD2	Q9H0N5	130 aa		0.07	□□□□□ -2.4
RAP1B-231	ENST00000544639	COMMD3	Q9UBI1	195 aa		0.07	□□□□□ -2.4
RAP1B-231	ENST00000544639	CACNA1H	O95180	2353 aa		0.07	□□□□□ -2.4
RAP1B-231	ENST00000544639	ESPL1	Q14674	2120 aa		0.07	□□□□□ -2.4
RAP1B-231	ENST00000544639	SPAG17	Q6Q759	2223 aa		0.06	□□□□□ -2.4
RAP1B-231	ENST00000544639	ZCCHC11	Q5TAX3	1644 aa	Known RBP	0.06	□□□□□ -2.4
RAP1B-231	ENST00000544639	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	0.06	□□□□□ -2.4
RAP1B-231	ENST00000544639	PFDN1	O60925	122 aa		0.06	□□□□□ -2.4
RAP1B-231	ENST00000544639	SLC25A4	P12235	298 aa		0.06	□□□□□ -2.4
RAP1B-231	ENST00000544639	MED31	Q9Y3C7	131 aa		0.06	□□□□□ -2.4
RAP1B-231	ENST00000544639	FAM135B	Q49AJ0	1406 aa		0.05	□□□□□ -2.4
RAP1B-231	ENST00000544639	ABCA1	O95477	2261 aa		0.05	□□□□□ -2.4
RAP1B-231	ENST00000544639	TRBV7-6	A0A0J9YX20	115 aa		0.05	□□□□□ -2.4
RAP1B-231	ENST00000544639	SRP9	P49458	86 aa	Known RBP	0.05	□□□□□ -2.4
RAP1B-231	ENST00000544639	BLCAP	P62952	87 aa		0.05	□□□□□ -2.4
RAP1B-231	ENST00000544639	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	0.05	□□□□□ -2.4
RAP1B-231	ENST00000544639	THEM6	Q8WUY1	208 aa		0.05	□□□□□ -2.4
RAP1B-231	ENST00000544639	ATPIF1	Q9UII2	106 aa		0.05	□□□□□ -2.4
RAP1B-231	ENST00000544639	ABCA12	Q86UK0	2595 aa		0.05	□□□□□ -2.4
RAP1B-231	ENST00000544639	TMEM30CP	A0ZSE6	113 aa		0.04	□□□□□ -2.4
RAP1B-231	ENST00000544639	TMEM189	A5PLL7	270 aa		0.04	□□□□□ -2.4
RAP1B-231	ENST00000544639	IFITM5	A6NNB3	132 aa		0.04	□□□□□ -2.4
RAP1B-231	ENST00000544639	HIGD1C	A8MV81	97 aa		0.04	□□□□□ -2.4
RAP1B-231	ENST00000544639		E7EQ34	232 aa		0.04	□□□□□ -2.4
RAP1B-231	ENST00000544639	GTF2A1	P52655	376 aa	Predicted RBP	0.04	□□□□□ -2.4
RAP1B-231	ENST00000544639	LYPD5	Q6UWN5	251 aa		0.04	□□□□□ -2.4
RAP1B-231	ENST00000544639	OR8J3	Q8NGG0	315 aa		0.04	□□□□□ -2.4
RAP1B-231	ENST00000544639	OR51A4	Q8NGJ6	313 aa		0.04	□□□□□ -2.4
RAP1B-231	ENST00000544639	SYNE2	Q8WXH0	6885 aa	Known RBP	0.04	□□□□□ -2.4
RAP1B-231	ENST00000544639	SSPO	A2VEC9	5147 aa		0.03	□□□□□ -2.4
RAP1B-231	ENST00000544639	EDF1	O60869	148 aa	Known RBP	0.03	□□□□□ -2.4
RAP1B-231	ENST00000544639	FAM107A	O95990	144 aa		0.03	□□□□□ -2.4
RAP1B-231	ENST00000544639	CRYGS	P22914	178 aa		0.03	□□□□□ -2.4
RAP1B-231	ENST00000544639	CBLN4	Q9NTU7	201 aa		0.03	□□□□□ -2.4
RAP1B-231	ENST00000544639	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	0.03	□□□□□ -2.4
RAP1B-231	ENST00000544639	TTC28	Q96AY4	2481 aa		0.03	□□□□□ -2.41
RAP1B-231	ENST00000544639	JMJD1C	Q15652	2540 aa		0.03	□□□□□ -2.41
RAP1B-231	ENST00000544639	DMBT1	Q9UGM3	2413 aa	Predicted RBP	0.02	□□□□□ -2.41
RAP1B-231	ENST00000544639	AFDN	P55196	1824 aa	Known RBP	0.02	□□□□□ -2.41
RAP1B-231	ENST00000544639	FER1L6	Q2WGJ9	1857 aa		0.02	□□□□□ -2.41
RAP1B-231	ENST00000544639	LOC107984640	A0A0U1RRK4	108 aa		0.02	□□□□□ -2.41
RAP1B-231	ENST00000544639	CDC42EP2	O14613	210 aa		0.02	□□□□□ -2.41
RAP1B-231	ENST00000544639	POLR2H	P52434	150 aa	Known RBP	0.02	□□□□□ -2.41
RAP1B-231	ENST00000544639	RHOH	Q15669	191 aa		0.02	□□□□□ -2.41
RAP1B-231	ENST00000544639	TRAPPC2L	Q9UL33	140 aa		0.02	□□□□□ -2.41
RAP1B-231	ENST00000544639	HRNR	Q86YZ3	2850 aa	Predicted RBP	0.02	□□□□□ -2.41
RAP1B-231	ENST00000544639	FXYD1	O00168	92 aa		0.01	□□□□□ -2.41
RAP1B-231	ENST00000544639	TPST1	O60507	370 aa		0.01	□□□□□ -2.41
RAP1B-231	ENST00000544639	IGKC	P01834	107 aa		0.01	□□□□□ -2.41
RAP1B-231	ENST00000544639	RPL7	P18124	248 aa	Known RBP	0.01	□□□□□ -2.41
RAP1B-231	ENST00000544639	ETV6	P41212	452 aa		0.01	□□□□□ -2.41
RAP1B-231	ENST00000544639	NAT14	Q8WUY8	206 aa		0.01	□□□□□ -2.41
RAP1B-231	ENST00000544639	DMAC1	Q96GE9	116 aa		0.01	□□□□□ -2.41
RAP1B-231	ENST00000544639	SMIM7	Q9BQ49	75 aa		0.01	□□□□□ -2.41
RAP1B-231	ENST00000544639	RBBP6	Q7Z6E9	1792 aa	Known RBP	0.01	□□□□□ -2.41
RAP1B-231	ENST00000544639	COL7A1	Q02388	2944 aa		0	□□□□□ -2.41
RAP1B-231	ENST00000544639		A0A0G2JMM0	328 aa		0	□□□□□ -2.41

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