RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 A0A1W2PRX2 142 aa14.9□□□□□ -0.02
COPS7A-218ENST00000543939 TMEM189A5PLL7 270 aa14.9□□□□□ -0.02
COPS7A-218ENST00000543939 FABP5P3A8MUU1 101 aa14.9□□□□□ -0.02
COPS7A-218ENST00000543939 CSN3P07498 182 aa14.89□□□□□ -0.03
COPS7A-218ENST00000543939 SRSF2Q01130 221 aaKnown RBP14.89□□□□□ -0.03
COPS7A-218ENST00000543939 F6UB75 175 aa14.89□□□□□ -0.03
COPS7A-218ENST00000543939 CCL24O00175 119 aa14.89□□□□□ -0.03
COPS7A-218ENST00000543939 TFPI2P48307 235 aa14.89□□□□□ -0.03
COPS7A-218ENST00000543939 CRLF1O75462 422 aa14.88□□□□□ -0.03
COPS7A-218ENST00000543939 HLA-DQA1P01909 254 aa14.88□□□□□ -0.03
COPS7A-218ENST00000543939 HOXA5P20719 270 aa14.88□□□□□ -0.03
COPS7A-218ENST00000543939 HIST1H1AQ02539 215 aaPredicted RBP14.88□□□□□ -0.03
COPS7A-218ENST00000543939 GDF5OSQ5U4N7 250 aa14.88□□□□□ -0.03
COPS7A-218ENST00000543939 FAM19A4Q96LR4 140 aa14.88□□□□□ -0.03
COPS7A-218ENST00000543939 NSD1Q96L73 2696 aaPredicted RBP14.87□□□□□ -0.03
COPS7A-218ENST00000543939 XKRY2A2RUG3 117 aa14.87□□□□□ -0.03
COPS7A-218ENST00000543939 RPS20P60866 119 aaKnown RBP14.87□□□□□ -0.03
COPS7A-218ENST00000543939 RAB4BP61018 213 aa14.87□□□□□ -0.03
COPS7A-218ENST00000543939 FN1P02751 2386 aaKnown RBP14.87□□□□□ -0.03
COPS7A-218ENST00000543939 ZNF688P0C7X2 276 aa14.86□□□□□ -0.03
COPS7A-218ENST00000543939 SNRPD3P62318 126 aaKnown RBP14.86□□□□□ -0.03
COPS7A-218ENST00000543939 Q6AWC8 147 aa14.86□□□□□ -0.03
COPS7A-218ENST00000543939 ZNF575Q86XF7 245 aa14.86□□□□□ -0.03
COPS7A-218ENST00000543939 ZFAND2AQ8N6M9 145 aa14.86□□□□□ -0.03
COPS7A-218ENST00000543939 TMSB15BA0A087X1C1 80 aa14.86□□□□□ -0.03
COPS7A-218ENST00000543939 TRBV7-9A0A0J9YWB2 115 aa14.86□□□□□ -0.03
COPS7A-218ENST00000543939 PAFAH1B2P68402 229 aa14.86□□□□□ -0.03
COPS7A-218ENST00000543939 HBBP68871 147 aa14.86□□□□□ -0.03
COPS7A-218ENST00000543939 LINC01559Q495D7 138 aa14.86□□□□□ -0.03
COPS7A-218ENST00000543939 PSMG4Q5JS54 123 aa14.85□□□□□ -0.03
COPS7A-218ENST00000543939 COA6Q5JTJ3 125 aaKnown RBP14.85□□□□□ -0.03
COPS7A-218ENST00000543939 PRR9Q5T870 116 aa14.85□□□□□ -0.03
COPS7A-218ENST00000543939 ADARB2-AS1A8MUL3 147 aa14.84□□□□□ -0.03
COPS7A-218ENST00000543939 ORM1P02763 201 aa14.84□□□□□ -0.03
COPS7A-218ENST00000543939 CAMPP49913 170 aa14.84□□□□□ -0.03
COPS7A-218ENST00000543939 TRAV2A0A0B4J234 112 aa14.83□□□□□ -0.03
COPS7A-218ENST00000543939 A0A1B0GUT8 65 aa14.83□□□□□ -0.03
COPS7A-218ENST00000543939 APRG1Q8IVJ8 170 aa14.83□□□□□ -0.03
COPS7A-218ENST00000543939 C11orf21Q9P2W6 132 aa14.83□□□□□ -0.03
COPS7A-218ENST00000543939 APCSP02743 223 aa14.83□□□□□ -0.04
COPS7A-218ENST00000543939 ARMS2P0C7Q2 107 aa14.83□□□□□ -0.04
COPS7A-218ENST00000543939 CRISP2P16562 243 aa14.83□□□□□ -0.04
COPS7A-218ENST00000543939 SLAQ13239 276 aa14.83□□□□□ -0.04
COPS7A-218ENST00000543939 DEFB114Q30KQ6 69 aa14.83□□□□□ -0.04
COPS7A-218ENST00000543939 GFI1BQ5VTD9 330 aa14.83□□□□□ -0.04
COPS7A-218ENST00000543939 TMEM61Q8N0U2 210 aa14.83□□□□□ -0.04
COPS7A-218ENST00000543939 DYNLRB2Q8TF09 96 aa14.83□□□□□ -0.04
COPS7A-218ENST00000543939 SETXQ7Z333 2677 aaKnown RBP14.82□□□□□ -0.04
COPS7A-218ENST00000543939 IGKV3D-20A0A0C4DH25 116 aa14.82□□□□□ -0.04
COPS7A-218ENST00000543939 IGLC6P0CF74 106 aa14.82□□□□□ -0.04
COPS7A-218ENST00000543939 RIGQ13278 110 aa14.82□□□□□ -0.04
COPS7A-218ENST00000543939 A0A0J9YX75 114 aa14.81□□□□□ -0.04
COPS7A-218ENST00000543939 KRTAP10-3P60369 221 aa14.81□□□□□ -0.04
COPS7A-218ENST00000543939 LYZL1Q6UWQ5 148 aa14.81□□□□□ -0.04
COPS7A-218ENST00000543939 HIST3H2BBQ8N257 126 aa14.81□□□□□ -0.04
COPS7A-218ENST00000543939 IFITM10A6NMD0 228 aa14.8□□□□□ -0.04
COPS7A-218ENST00000543939 CTRLP40313 264 aa14.8□□□□□ -0.04
COPS7A-218ENST00000543939 KIAA1644Q3SXP7 199 aa14.8□□□□□ -0.04
COPS7A-218ENST00000543939 Q6ZQT7 251 aa14.8□□□□□ -0.04
COPS7A-218ENST00000543939 TPPP3Q9BW30 176 aa14.8□□□□□ -0.04
COPS7A-218ENST00000543939 SSBP4Q9BWG4 385 aaPredicted RBP14.8□□□□□ -0.04
COPS7A-218ENST00000543939 A0A1B0GW15 77 aa14.8□□□□□ -0.04
COPS7A-218ENST00000543939 CD33P20138 364 aa14.8□□□□□ -0.04
COPS7A-218ENST00000543939 FER1L6-AS1Q8NA97 138 aa14.8□□□□□ -0.04
COPS7A-218ENST00000543939 GATD1Q8NB37 220 aa14.8□□□□□ -0.04
COPS7A-218ENST00000543939 ODF3Q96PU9 254 aa14.8□□□□□ -0.04
COPS7A-218ENST00000543939 SIGLEC8Q9NYZ4 499 aa14.8□□□□□ -0.04
COPS7A-218ENST00000543939 SETD2Q9BYW2 2564 aaPredicted RBP14.8□□□□□ -0.04
COPS7A-218ENST00000543939 FLNBO75369 2602 aaKnown RBP14.79□□□□□ -0.04
COPS7A-218ENST00000543939 GRIFINA4D1Z8 144 aa14.79□□□□□ -0.04
COPS7A-218ENST00000543939 GPX1P07203 203 aa14.79□□□□□ -0.04
COPS7A-218ENST00000543939 AKR1D1P51857 326 aa14.79□□□□□ -0.04
COPS7A-218ENST00000543939 EBLN2Q6P2I7 272 aa14.79□□□□□ -0.04
COPS7A-218ENST00000543939 BORCS7Q96B45 105 aa14.79□□□□□ -0.04
COPS7A-218ENST00000543939 WNK1Q9H4A3 2382 aa14.78□□□□□ -0.04
COPS7A-218ENST00000543939 TRAV21A0A0B4J279 112 aa14.78□□□□□ -0.04
COPS7A-218ENST00000543939 KLLNB2CW77 178 aa14.78□□□□□ -0.04
COPS7A-218ENST00000543939 J3KRW8 73 aa14.78□□□□□ -0.04
COPS7A-218ENST00000543939 CD300EQ496F6 205 aaPredicted RBP14.78□□□□□ -0.04
COPS7A-218ENST00000543939 FOXI2Q6ZQN5 318 aa14.78□□□□□ -0.04
COPS7A-218ENST00000543939 SORL1Q92673 2214 aa14.78□□□□□ -0.04
COPS7A-218ENST00000543939 S100A8P05109 93 aa14.78□□□□□ -0.04
COPS7A-218ENST00000543939 KIR3DS1Q14943 382 aa14.78□□□□□ -0.04
COPS7A-218ENST00000543939 NSUN5P1Q3KNT7 163 aa14.78□□□□□ -0.04
COPS7A-218ENST00000543939 NDUFA11Q86Y39 141 aa14.78□□□□□ -0.04
COPS7A-218ENST00000543939 AGRNO00468 2067 aa14.77□□□□□ -0.05
COPS7A-218ENST00000543939 TRAV25A0A0B4J276 109 aa14.77□□□□□ -0.05
COPS7A-218ENST00000543939 A0A1B0GUS0 222 aa14.77□□□□□ -0.05
COPS7A-218ENST00000543939 RNASE4P34096 147 aaKnown RBP14.77□□□□□ -0.05
COPS7A-218ENST00000543939 Q0VG73 95 aa14.77□□□□□ -0.05
COPS7A-218ENST00000543939 DUSP14O95147 198 aaKnown RBP14.76□□□□□ -0.05
COPS7A-218ENST00000543939 SRIP30626 198 aa14.76□□□□□ -0.05
COPS7A-218ENST00000543939 PDZD11Q5EBL8 140 aa14.76□□□□□ -0.05
COPS7A-218ENST00000543939 SPAG8Q99932 426 aaPredicted RBP14.76□□□□□ -0.05
COPS7A-218ENST00000543939 CNFNQ9BYD5 112 aa14.76□□□□□ -0.05
COPS7A-218ENST00000543939 TP53TG3Q9ULZ0 132 aa14.76□□□□□ -0.05
COPS7A-218ENST00000543939 DEFB131AP59861 70 aa14.75□□□□□ -0.05
COPS7A-218ENST00000543939 PRR31Q5SQ13 230 aa14.75□□□□□ -0.05
COPS7A-218ENST00000543939 C2CD3Q4AC94 2353 aa14.75□□□□□ -0.05
COPS7A-218ENST00000543939 F2Z2F3 143 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms