RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 NIPSNAP3BQ9BS92 247 aa8.74□□□□□ -1.01
DDB1-223ENST00000543658 TMEM208Q9BTX3 173 aa8.74□□□□□ -1.01
DDB1-223ENST00000543658 XCL2Q9UBD3 114 aa8.74□□□□□ -1.01
DDB1-223ENST00000543658 TRAV12-2A0A075B6T6 113 aa8.73□□□□□ -1.01
DDB1-223ENST00000543658 C7orf71A4D174 169 aa8.73□□□□□ -1.01
DDB1-223ENST00000543658 F8W036 122 aa8.73□□□□□ -1.01
DDB1-223ENST00000543658 GCGP01275 180 aa8.73□□□□□ -1.01
DDB1-223ENST00000543658 RNASE4P34096 147 aaKnown RBP8.73□□□□□ -1.01
DDB1-223ENST00000543658 BTN1A1Q13410 526 aa8.73□□□□□ -1.01
DDB1-223ENST00000543658 PRR27Q6MZM9 219 aa8.73□□□□□ -1.01
DDB1-223ENST00000543658 IGF2BP2-AS1Q96M15 143 aa8.73□□□□□ -1.01
DDB1-223ENST00000543658 NAT8Q9UHE5 227 aa8.73□□□□□ -1.01
DDB1-223ENST00000543658 GOLT1BQ9Y3E0 138 aa8.73□□□□□ -1.01
DDB1-223ENST00000543658 MGAM2Q2M2H8 2515 aa8.72□□□□□ -1.01
DDB1-223ENST00000543658 TRAV21A0A0B4J279 112 aa8.72□□□□□ -1.01
DDB1-223ENST00000543658 KLLNB2CW77 178 aa8.72□□□□□ -1.01
DDB1-223ENST00000543658 C9JQL5 133 aa8.72□□□□□ -1.01
DDB1-223ENST00000543658 DEFA6Q01524 100 aa8.72□□□□□ -1.01
DDB1-223ENST00000543658 TMEM241Q24JQ0 296 aa8.72□□□□□ -1.01
DDB1-223ENST00000543658 GFI1BQ5VTD9 330 aa8.72□□□□□ -1.01
DDB1-223ENST00000543658 ZFAND2AQ8N6M9 145 aa8.72□□□□□ -1.01
DDB1-223ENST00000543658 DAZAP1Q96EP5 407 aaKnown RBP8.72□□□□□ -1.01
DDB1-223ENST00000543658 FAM19A4Q96LR4 140 aa8.72□□□□□ -1.01
DDB1-223ENST00000543658 C20orf144Q9BQM9 153 aa8.72□□□□□ -1.01
DDB1-223ENST00000543658 IGHV3OR16-12A0A075B7B8 117 aa8.71□□□□□ -1.02
DDB1-223ENST00000543658 TRAV12-3A0A0B4J271 114 aa8.71□□□□□ -1.02
DDB1-223ENST00000543658 TMEM218A2RU14 115 aa8.71□□□□□ -1.02
DDB1-223ENST00000543658 FAM162BQ5T6X4 162 aa8.71□□□□□ -1.02
DDB1-223ENST00000543658 TMEM256Q8N2U0 113 aa8.71□□□□□ -1.02
DDB1-223ENST00000543658 TVP23CQ96ET8 276 aa8.71□□□□□ -1.02
DDB1-223ENST00000543658 ZC2HC1AQ96GY0 325 aa8.71□□□□□ -1.02
DDB1-223ENST00000543658 NAGKQ9UJ70 344 aa8.71□□□□□ -1.02
DDB1-223ENST00000543658 LY96Q9Y6Y9 160 aa8.71□□□□□ -1.02
DDB1-223ENST00000543658 TRBV20OR9-2A0A075B6H5 130 aa8.7□□□□□ -1.02
DDB1-223ENST00000543658 PGPEP1LA6NFU8 196 aa8.7□□□□□ -1.02
DDB1-223ENST00000543658 FABP5P3A8MUU1 101 aa8.7□□□□□ -1.02
DDB1-223ENST00000543658 PFN1P07737 140 aaKnown RBP8.7□□□□□ -1.02
DDB1-223ENST00000543658 ADIRFQ15847 76 aa8.7□□□□□ -1.02
DDB1-223ENST00000543658 DEFB135Q30KP9 77 aa8.7□□□□□ -1.02
DDB1-223ENST00000543658 Q6AWC8 147 aa8.7□□□□□ -1.02
DDB1-223ENST00000543658 LINC00322Q6ZN03 302 aaPredicted RBP8.7□□□□□ -1.02
DDB1-223ENST00000543658 RCHY1Q96PM5 261 aa8.7□□□□□ -1.02
DDB1-223ENST00000543658 LINC01587Q99440 93 aa8.7□□□□□ -1.02
DDB1-223ENST00000543658 H7BYZ3 331 aa8.69□□□□□ -1.02
DDB1-223ENST00000543658 CRXO43186 299 aaPredicted RBP8.69□□□□□ -1.02
DDB1-223ENST00000543658 PNRC1Q12796 327 aaPredicted RBP8.69□□□□□ -1.02
DDB1-223ENST00000543658 KIR3DS1Q14943 382 aa8.69□□□□□ -1.02
DDB1-223ENST00000543658 PRR9Q5T870 116 aa8.69□□□□□ -1.02
DDB1-223ENST00000543658 FAM159AQ6UWV7 190 aa8.69□□□□□ -1.02
DDB1-223ENST00000543658 Q6ZWC4 215 aa8.69□□□□□ -1.02
DDB1-223ENST00000543658 SLC7A5P1Q8MH63 180 aa8.69□□□□□ -1.02
DDB1-223ENST00000543658 OCC1Q8TAD7 63 aa8.69□□□□□ -1.02
DDB1-223ENST00000543658 SEC11CQ9BY50 192 aa8.69□□□□□ -1.02
DDB1-223ENST00000543658 KRBOX1C9JBD0 128 aa8.68□□□□□ -1.02
DDB1-223ENST00000543658 SH2D1AO60880 128 aa8.68□□□□□ -1.02
DDB1-223ENST00000543658 P01737 135 aa8.68□□□□□ -1.02
DDB1-223ENST00000543658 HTN1P15515 57 aa8.68□□□□□ -1.02
DDB1-223ENST00000543658 OR5I1Q13606 314 aa8.68□□□□□ -1.02
DDB1-223ENST00000543658 COX8CQ7Z4L0 72 aa8.68□□□□□ -1.02
DDB1-223ENST00000543658 LINC01551Q86U37 167 aa8.68□□□□□ -1.02
DDB1-223ENST00000543658 KCNS1Q96KK3 526 aa8.68□□□□□ -1.02
DDB1-223ENST00000543658 PYGO2Q9BRQ0 406 aa8.68□□□□□ -1.02
DDB1-223ENST00000543658 MLST8Q9BVC4 326 aa8.68□□□□□ -1.02
DDB1-223ENST00000543658 ZMAT4Q9H898 229 aa8.68□□□□□ -1.02
DDB1-223ENST00000543658 NOTCH1P46531 2555 aa8.68□□□□□ -1.02
DDB1-223ENST00000543658 CBY3A6NI87 242 aa8.67□□□□□ -1.02
DDB1-223ENST00000543658 M0R036 132 aa8.67□□□□□ -1.02
DDB1-223ENST00000543658 SPRY2O43597 315 aa8.67□□□□□ -1.02
DDB1-223ENST00000543658 IGLV2-8P01709 118 aa8.67□□□□□ -1.02
DDB1-223ENST00000543658 ORM1P02763 201 aa8.67□□□□□ -1.02
DDB1-223ENST00000543658 ZNF80P51504 273 aaPredicted RBP8.67□□□□□ -1.02
DDB1-223ENST00000543658 ERVFC1-1P60608 527 aa8.67□□□□□ -1.02
DDB1-223ENST00000543658 RPL23P62829 140 aaKnown RBP8.67□□□□□ -1.02
DDB1-223ENST00000543658 MUC21Q5SSG8 566 aa8.67□□□□□ -1.02
DDB1-223ENST00000543658 IBA57Q5T440 356 aaKnown RBP8.67□□□□□ -1.02
DDB1-223ENST00000543658 C15orf54Q8N8G6 183 aa8.67□□□□□ -1.02
DDB1-223ENST00000543658 SPATA25Q9BR10 227 aa8.67□□□□□ -1.02
DDB1-223ENST00000543658 SDF2L1Q9HCN8 221 aa8.67□□□□□ -1.02
DDB1-223ENST00000543658 DNAH3Q8TD57 4116 aa8.67□□□□□ -1.02
DDB1-223ENST00000543658 TRGV11A0A075B6L2 103 aa8.66□□□□□ -1.02
DDB1-223ENST00000543658 IGHV1OR15-1A0A075B7D0 117 aa8.66□□□□□ -1.02
DDB1-223ENST00000543658 XKRY2A2RUG3 117 aa8.66□□□□□ -1.02
DDB1-223ENST00000543658 B4DEV8 164 aa8.66□□□□□ -1.02
DDB1-223ENST00000543658 K7EN84 100 aa8.66□□□□□ -1.02
DDB1-223ENST00000543658 GIG44P09565 113 aaPredicted RBP8.66□□□□□ -1.02
DDB1-223ENST00000543658 ADCYAP1P18509 176 aa8.66□□□□□ -1.02
DDB1-223ENST00000543658 RRN3P1Q2M238 152 aa8.66□□□□□ -1.02
DDB1-223ENST00000543658 SBSPONQ8IVN8 264 aa8.66□□□□□ -1.02
DDB1-223ENST00000543658 RNF183Q96D59 192 aa8.66□□□□□ -1.02
DDB1-223ENST00000543658 B9D2Q9BPU9 175 aa8.66□□□□□ -1.02
DDB1-223ENST00000543658 TP53TG1Q9Y2A0 90 aa8.66□□□□□ -1.02
DDB1-223ENST00000543658 TMEM189A5PLL7 270 aa8.65□□□□□ -1.02
DDB1-223ENST00000543658 ZNF705GA8MUZ8 300 aaPredicted RBP8.65□□□□□ -1.02
DDB1-223ENST00000543658 GATCO43716 136 aaKnown RBP8.65□□□□□ -1.02
DDB1-223ENST00000543658 ZNF324O75467 553 aaPredicted RBP8.65□□□□□ -1.02
DDB1-223ENST00000543658 RBMY1A1P0DJD3 496 aaKnown RBP8.65□□□□□ -1.02
DDB1-223ENST00000543658 RBMY1CP0DJD4 496 aa8.65□□□□□ -1.02
DDB1-223ENST00000543658 S100A4P26447 101 aaKnown RBP8.65□□□□□ -1.02
DDB1-223ENST00000543658 RPS20P60866 119 aaKnown RBP8.65□□□□□ -1.02
DDB1-223ENST00000543658 RBMY1FQ15415 496 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms