RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 HERV-K104P63124 156 aa15.63■□□□□ 0.09
HDAC4-215ENST00000543185 NDUFA4L2Q9NRX3 87 aa15.63■□□□□ 0.09
HDAC4-215ENST00000543185 TEN1Q86WV5 123 aa15.63■□□□□ 0.09
HDAC4-215ENST00000543185 NBL1P41271 181 aa15.63■□□□□ 0.09
HDAC4-215ENST00000543185 PSPNO60542 156 aa15.63■□□□□ 0.09
HDAC4-215ENST00000543185 C3orf36Q3SXR2 165 aa15.63■□□□□ 0.09
HDAC4-215ENST00000543185 MST1LQ2TV78 715 aa15.63■□□□□ 0.09
HDAC4-215ENST00000543185 PRSS57Q6UWY2 283 aa15.63■□□□□ 0.09
HDAC4-215ENST00000543185 CCDC168Q8NDH2 2452 aa15.63■□□□□ 0.09
HDAC4-215ENST00000543185 EFNA4P52798 201 aa15.62■□□□□ 0.09
HDAC4-215ENST00000543185 SCRT2Q9NQ03 307 aa15.62■□□□□ 0.09
HDAC4-215ENST00000543185 TRAV3A0A0B4J244 114 aa15.62■□□□□ 0.09
HDAC4-215ENST00000543185 ZNF134P52741 427 aa15.62■□□□□ 0.09
HDAC4-215ENST00000543185 CD177Q8N6Q3 437 aa15.62■□□□□ 0.09
HDAC4-215ENST00000543185 DEFB125Q8N687 156 aa15.62■□□□□ 0.09
HDAC4-215ENST00000543185 C11orf52Q96A22 123 aa15.62■□□□□ 0.09
HDAC4-215ENST00000543185 RHPN1-AS1Q9BWJ2 59 aa15.62■□□□□ 0.09
HDAC4-215ENST00000543185 MP68P56378 58 aa15.62■□□□□ 0.09
HDAC4-215ENST00000543185 FGFBP3Q8TAT2 258 aa15.62■□□□□ 0.09
HDAC4-215ENST00000543185 B5MCH6 92 aa15.61■□□□□ 0.09
HDAC4-215ENST00000543185 ATP6V0E2Q8NHE4 81 aa15.61■□□□□ 0.09
HDAC4-215ENST00000543185 C12orf74Q32Q52 190 aa15.61■□□□□ 0.09
HDAC4-215ENST00000543185 B4DSR2 109 aa15.61■□□□□ 0.09
HDAC4-215ENST00000543185 RBAKDNA6NC62 111 aa15.61■□□□□ 0.09
HDAC4-215ENST00000543185 MRPL35Q9NZE8 188 aaKnown RBP15.61■□□□□ 0.09
HDAC4-215ENST00000543185 CD24P25063 80 aa15.61■□□□□ 0.09
HDAC4-215ENST00000543185 LTBP1Q14766 1721 aa15.6■□□□□ 0.09
HDAC4-215ENST00000543185 NDPQ00604 133 aa15.6■□□□□ 0.09
HDAC4-215ENST00000543185 CSRP2Q16527 193 aa15.6■□□□□ 0.09
HDAC4-215ENST00000543185 SPRR3Q9UBC9 169 aa15.6■□□□□ 0.09
HDAC4-215ENST00000543185 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.6■□□□□ 0.09
HDAC4-215ENST00000543185 A0A1W2PPI3 338 aa15.6■□□□□ 0.09
HDAC4-215ENST00000543185 FOXI2Q6ZQN5 318 aa15.6■□□□□ 0.09
HDAC4-215ENST00000543185 K7ERJ3 54 aa15.6■□□□□ 0.09
HDAC4-215ENST00000543185 RSPO4Q2I0M5 234 aaPredicted RBP15.59■□□□□ 0.09
HDAC4-215ENST00000543185 RNF152Q8N8N0 203 aa15.59■□□□□ 0.09
HDAC4-215ENST00000543185 COL4A1P02462 1669 aa15.59■□□□□ 0.09
HDAC4-215ENST00000543185 H0YGX0 51 aa15.59■□□□□ 0.09
HDAC4-215ENST00000543185 GATA4P43694 442 aa15.59■□□□□ 0.09
HDAC4-215ENST00000543185 IL15RAQ13261 267 aa15.59■□□□□ 0.09
HDAC4-215ENST00000543185 ATP1A1-AS1Q5TC04 95 aa15.59■□□□□ 0.09
HDAC4-215ENST00000543185 PIP4P2Q8N4L2 257 aa15.59■□□□□ 0.09
HDAC4-215ENST00000543185 PRR25Q96S07 402 aa15.58■□□□□ 0.09
HDAC4-215ENST00000543185 IGKV1-16P04430 117 aa15.58■□□□□ 0.08
HDAC4-215ENST00000543185 C10orf55Q5SWW7 151 aa15.58■□□□□ 0.08
HDAC4-215ENST00000543185 LENEPQ9Y5L5 61 aa15.58■□□□□ 0.08
HDAC4-215ENST00000543185 LTAP01374 205 aa15.57■□□□□ 0.08
HDAC4-215ENST00000543185 CYYR1Q96J86 154 aa15.57■□□□□ 0.08
HDAC4-215ENST00000543185 GAFA1Q96PS6 74 aa15.57■□□□□ 0.08
HDAC4-215ENST00000543185 PAX9P55771 341 aa15.57■□□□□ 0.08
HDAC4-215ENST00000543185 FLVCR1-AS1Q8TAF5 88 aa15.57■□□□□ 0.08
HDAC4-215ENST00000543185 TRAV25A0A0B4J276 109 aa15.57■□□□□ 0.08
HDAC4-215ENST00000543185 CFC1BP0CG36 223 aa15.57■□□□□ 0.08
HDAC4-215ENST00000543185 CFC1P0CG37 223 aa15.57■□□□□ 0.08
HDAC4-215ENST00000543185 COA6Q5JTJ3 125 aaKnown RBP15.56■□□□□ 0.08
HDAC4-215ENST00000543185 C8orf49Q96NF6 230 aa15.56■□□□□ 0.08
HDAC4-215ENST00000543185 ZNF672Q499Z4 452 aaPredicted RBP15.56■□□□□ 0.08
HDAC4-215ENST00000543185 LYPD6BQ8NI32 183 aa15.56■□□□□ 0.08
HDAC4-215ENST00000543185 SS18L2Q9UHA2 77 aa15.56■□□□□ 0.08
HDAC4-215ENST00000543185 ZNF833PQ6ZTB9 187 aa15.56■□□□□ 0.08
HDAC4-215ENST00000543185 TMEM213A2RRL7 107 aa15.55■□□□□ 0.08
HDAC4-215ENST00000543185 IGHV1OR15-1A0A075B7D0 117 aa15.55■□□□□ 0.08
HDAC4-215ENST00000543185 SLC25A29Q8N8R3 303 aa15.55■□□□□ 0.08
HDAC4-215ENST00000543185 KLHL30-AS1Q8NEE0 82 aa15.55■□□□□ 0.08
HDAC4-215ENST00000543185 C8orf86Q6ZUL3 223 aa15.55■□□□□ 0.08
HDAC4-215ENST00000543185 LINC00479Q96M42 142 aa15.55■□□□□ 0.08
HDAC4-215ENST00000543185 PRDM6Q9NQX0 595 aa15.55■□□□□ 0.08
HDAC4-215ENST00000543185 PFN2P35080 140 aa15.55■□□□□ 0.08
HDAC4-215ENST00000543185 BAALC-AS2P0C853 105 aa15.54■□□□□ 0.08
HDAC4-215ENST00000543185 FAM110DQ8TAY7 271 aaPredicted RBP15.54■□□□□ 0.08
HDAC4-215ENST00000543185 TMEM219Q86XT9 240 aa15.54■□□□□ 0.08
HDAC4-215ENST00000543185 A0A0B4J2C4 111 aa15.54■□□□□ 0.08
HDAC4-215ENST00000543185 NDUFS7O75251 213 aa15.54■□□□□ 0.08
HDAC4-215ENST00000543185 IGLC7A0M8Q6 106 aa15.54■□□□□ 0.08
HDAC4-215ENST00000543185 LMO1P25800 156 aa15.54■□□□□ 0.08
HDAC4-215ENST00000543185 IGKV1D-17A0A075B6S4 117 aa15.54■□□□□ 0.08
HDAC4-215ENST00000543185 TRAV12-1A0A0B4J245 112 aa15.54■□□□□ 0.08
HDAC4-215ENST00000543185 E9PQ18 207 aa15.54■□□□□ 0.08
HDAC4-215ENST00000543185 HIGD1BQ9P298 99 aa15.54■□□□□ 0.08
HDAC4-215ENST00000543185 A0A1B0GUS0 222 aa15.53■□□□□ 0.08
HDAC4-215ENST00000543185 APOC4P55056 127 aa15.53■□□□□ 0.08
HDAC4-215ENST00000543185 PDE6GP18545 87 aa15.53■□□□□ 0.08
HDAC4-215ENST00000543185 IGHV1-69DA0A0B4J2H0 117 aa15.53■□□□□ 0.08
HDAC4-215ENST00000543185 H3BRN7 92 aa15.53■□□□□ 0.08
HDAC4-215ENST00000543185 ABCA2Q9BZC7 2435 aa15.52■□□□□ 0.08
HDAC4-215ENST00000543185 MSRB2Q9Y3D2 182 aa15.52■□□□□ 0.08
HDAC4-215ENST00000543185 WFDC12Q8WWY7 111 aa15.52■□□□□ 0.08
HDAC4-215ENST00000543185 FAM236AA0A1B0GUQ0 79 aa15.52■□□□□ 0.08
HDAC4-215ENST00000543185 FAM236BA0A1B0GV22 79 aa15.52■□□□□ 0.08
HDAC4-215ENST00000543185 CHKB-CPT1BH3BT56 60 aa15.52■□□□□ 0.08
HDAC4-215ENST00000543185 NDUFA4O00483 81 aa15.52■□□□□ 0.08
HDAC4-215ENST00000543185 DKK1O94907 266 aa15.52■□□□□ 0.08
HDAC4-215ENST00000543185 MCRIP2Q9BUT9 160 aaKnown RBP15.52■□□□□ 0.08
HDAC4-215ENST00000543185 SPACA3Q8IXA5 215 aa15.52■□□□□ 0.07
HDAC4-215ENST00000543185 H3BUX3 64 aa15.51■□□□□ 0.07
HDAC4-215ENST00000543185 FOXL2NBQ6ZUU3 175 aa15.51■□□□□ 0.07
HDAC4-215ENST00000543185 ZC2HC1AQ96GY0 325 aa15.51■□□□□ 0.07
HDAC4-215ENST00000543185 A0A1B0GX51 115 aa15.51■□□□□ 0.07
HDAC4-215ENST00000543185 Q6ZRM9 215 aa15.51■□□□□ 0.07
HDAC4-215ENST00000543185 MRPL53Q96EL3 112 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms