RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 PRSS46E5RG02 174 aa6.29□□□□□ -1.4
PDLIM5-221ENST00000542407 APOHP02749 345 aaPredicted RBP6.29□□□□□ -1.4
PDLIM5-221ENST00000542407 SMIM13P0DJ93 91 aa6.29□□□□□ -1.4
PDLIM5-221ENST00000542407 PYYP10082 97 aa6.29□□□□□ -1.4
PDLIM5-221ENST00000542407 FXYD7P58549 80 aa6.29□□□□□ -1.4
PDLIM5-221ENST00000542407 HES1Q14469 280 aa6.29□□□□□ -1.4
PDLIM5-221ENST00000542407 Q5XG85 94 aa6.29□□□□□ -1.4
PDLIM5-221ENST00000542407 TRPT1Q86TN4 253 aaKnown RBP6.29□□□□□ -1.4
PDLIM5-221ENST00000542407 DTX2Q86UW9 622 aa6.29□□□□□ -1.4
PDLIM5-221ENST00000542407 LINC00311Q8N616 119 aa6.29□□□□□ -1.4
PDLIM5-221ENST00000542407 BEX4Q9NWD9 120 aaPredicted RBP6.29□□□□□ -1.4
PDLIM5-221ENST00000542407 CRLF1O75462 422 aa6.28□□□□□ -1.4
PDLIM5-221ENST00000542407 HSPE1P61604 102 aaKnown RBP6.28□□□□□ -1.4
PDLIM5-221ENST00000542407 PRR20EP86478 221 aa6.28□□□□□ -1.4
PDLIM5-221ENST00000542407 PRR20CP86479 221 aa6.28□□□□□ -1.4
PDLIM5-221ENST00000542407 PRR20DP86480 221 aa6.28□□□□□ -1.4
PDLIM5-221ENST00000542407 PRR20BP86481 221 aa6.28□□□□□ -1.4
PDLIM5-221ENST00000542407 PRR20AP86496 221 aa6.28□□□□□ -1.4
PDLIM5-221ENST00000542407 MLANAQ16655 118 aa6.28□□□□□ -1.4
PDLIM5-221ENST00000542407 PRSS3P2Q8NHM4 247 aa6.28□□□□□ -1.4
PDLIM5-221ENST00000542407 CARD19Q96LW7 228 aa6.28□□□□□ -1.4
PDLIM5-221ENST00000542407 PKD1L2Q7Z442 2459 aa6.28□□□□□ -1.4
PDLIM5-221ENST00000542407 ANKHD1Q8IWZ3 2542 aaKnown RBP6.28□□□□□ -1.4
PDLIM5-221ENST00000542407 SPTA1P02549 2419 aa6.28□□□□□ -1.4
PDLIM5-221ENST00000542407 LOC389332A0A1B0GUA5 103 aa6.28□□□□□ -1.4
PDLIM5-221ENST00000542407 C19orf84I3L1E1 186 aa6.28□□□□□ -1.4
PDLIM5-221ENST00000542407 SNCGO76070 127 aa6.28□□□□□ -1.4
PDLIM5-221ENST00000542407 IGKV1-16P04430 117 aa6.28□□□□□ -1.4
PDLIM5-221ENST00000542407 FGF6P10767 208 aa6.28□□□□□ -1.4
PDLIM5-221ENST00000542407 MORN5Q5VZ52 161 aa6.28□□□□□ -1.4
PDLIM5-221ENST00000542407 PCP2Q8IVA1 136 aa6.28□□□□□ -1.4
PDLIM5-221ENST00000542407 EXOC3-AS1Q8N2X6 119 aa6.28□□□□□ -1.4
PDLIM5-221ENST00000542407 FAM236AA0A1B0GUQ0 79 aa6.27□□□□□ -1.41
PDLIM5-221ENST00000542407 FAM236BA0A1B0GV22 79 aa6.27□□□□□ -1.41
PDLIM5-221ENST00000542407 C15orf61A6NNL5 157 aa6.27□□□□□ -1.41
PDLIM5-221ENST00000542407 OOSP1A8MZH6 123 aa6.27□□□□□ -1.41
PDLIM5-221ENST00000542407 PEX7O00628 323 aa6.27□□□□□ -1.41
PDLIM5-221ENST00000542407 LY6HO94772 140 aa6.27□□□□□ -1.41
PDLIM5-221ENST00000542407 IGHV1-8P0DP01 117 aa6.27□□□□□ -1.41
PDLIM5-221ENST00000542407 OR10J6PQ8NGY7 276 aa6.27□□□□□ -1.41
PDLIM5-221ENST00000542407 MRPL20Q9BYC9 149 aaKnown RBP6.27□□□□□ -1.41
PDLIM5-221ENST00000542407 JPT2Q9H910 190 aa6.27□□□□□ -1.41
PDLIM5-221ENST00000542407 TMEM14BQ9NUH8 114 aa6.27□□□□□ -1.41
PDLIM5-221ENST00000542407 ROS1P08922 2347 aa6.27□□□□□ -1.41
PDLIM5-221ENST00000542407 A0A1B0GXF2 115 aa6.27□□□□□ -1.41
PDLIM5-221ENST00000542407 SRRM4A7MD48 611 aaKnown RBP6.27□□□□□ -1.41
PDLIM5-221ENST00000542407 TMEM262E9PQX1 116 aa6.27□□□□□ -1.41
PDLIM5-221ENST00000542407 ATP5L2Q7Z4Y8 100 aa6.27□□□□□ -1.41
PDLIM5-221ENST00000542407 FAM19A1Q7Z5A9 133 aa6.27□□□□□ -1.41
PDLIM5-221ENST00000542407 OR9G1Q8NH87 305 aa6.27□□□□□ -1.41
PDLIM5-221ENST00000542407 PRO0461Q9UI25 63 aa6.27□□□□□ -1.41
PDLIM5-221ENST00000542407 PKDREJQ9NTG1 2253 aa6.27□□□□□ -1.41
PDLIM5-221ENST00000542407 H3BMG7 143 aa6.27□□□□□ -1.41
PDLIM5-221ENST00000542407 P01737 135 aa6.27□□□□□ -1.41
PDLIM5-221ENST00000542407 CACNG7P62955 275 aa6.27□□□□□ -1.41
PDLIM5-221ENST00000542407 FAM231DQ6ZW35 169 aa6.27□□□□□ -1.41
PDLIM5-221ENST00000542407 GTSF1Q8WW33 167 aa6.27□□□□□ -1.41
PDLIM5-221ENST00000542407 C20orf173Q96LM9 149 aa6.27□□□□□ -1.41
PDLIM5-221ENST00000542407 ZNF747Q9BV97 191 aa6.27□□□□□ -1.41
PDLIM5-221ENST00000542407 LRBAP50851 2863 aa6.26□□□□□ -1.41
PDLIM5-221ENST00000542407 CNTFRP26992 372 aa6.26□□□□□ -1.41
PDLIM5-221ENST00000542407 CSN1S1P47710 185 aa6.26□□□□□ -1.41
PDLIM5-221ENST00000542407 AMTNQ6UX39 209 aa6.26□□□□□ -1.41
PDLIM5-221ENST00000542407 BCL6BQ8N143 479 aaPredicted RBP6.26□□□□□ -1.41
PDLIM5-221ENST00000542407 GATD1Q8NB37 220 aa6.26□□□□□ -1.41
PDLIM5-221ENST00000542407 OR4X2Q8NGF9 303 aa6.26□□□□□ -1.41
PDLIM5-221ENST00000542407 TIMD4Q96H15 378 aa6.26□□□□□ -1.41
PDLIM5-221ENST00000542407 RPP21Q9H633 154 aaKnown RBP6.26□□□□□ -1.41
PDLIM5-221ENST00000542407 NHP2Q9NX24 153 aaKnown RBP6.26□□□□□ -1.41
PDLIM5-221ENST00000542407 TET2Q6N021 2002 aaPredicted RBP6.26□□□□□ -1.41
PDLIM5-221ENST00000542407 IGKV1OR2-108A0A075B7D4 117 aa6.26□□□□□ -1.41
PDLIM5-221ENST00000542407 TRAV4A0A0B4J268 109 aa6.26□□□□□ -1.41
PDLIM5-221ENST00000542407 IGHV3-48P01763 117 aa6.26□□□□□ -1.41
PDLIM5-221ENST00000542407 RBP4P02753 201 aa6.26□□□□□ -1.41
PDLIM5-221ENST00000542407 PRB4P10163 310 aaPredicted RBP6.26□□□□□ -1.41
PDLIM5-221ENST00000542407 FXYD2P54710 66 aa6.26□□□□□ -1.41
PDLIM5-221ENST00000542407 LINC00322Q6ZN03 302 aaPredicted RBP6.26□□□□□ -1.41
PDLIM5-221ENST00000542407 C10orf126Q8N4M7 172 aa6.26□□□□□ -1.41
PDLIM5-221ENST00000542407 LY6G5BQ8NDX9 201 aa6.26□□□□□ -1.41
PDLIM5-221ENST00000542407 H3BTX0 84 aa6.25□□□□□ -1.41
PDLIM5-221ENST00000542407 NFE4Q86UQ8 179 aa6.25□□□□□ -1.41
PDLIM5-221ENST00000542407 APRG1Q8IVJ8 170 aa6.25□□□□□ -1.41
PDLIM5-221ENST00000542407 C18orf15Q96N68 181 aa6.25□□□□□ -1.41
PDLIM5-221ENST00000542407 PAXXQ9BUH6 204 aa6.25□□□□□ -1.41
PDLIM5-221ENST00000542407 TTTY13Q9BZ97 58 aa6.25□□□□□ -1.41
PDLIM5-221ENST00000542407 UPK2O00526 184 aa6.25□□□□□ -1.41
PDLIM5-221ENST00000542407 IGLV1-47P01700 117 aa6.25□□□□□ -1.41
PDLIM5-221ENST00000542407 DLX1P56177 255 aa6.25□□□□□ -1.41
PDLIM5-221ENST00000542407 C9orf153Q5TBE3 101 aa6.25□□□□□ -1.41
PDLIM5-221ENST00000542407 ZNF329Q86UD4 541 aa6.25□□□□□ -1.41
PDLIM5-221ENST00000542407 TP53TG1Q9Y2A0 90 aa6.25□□□□□ -1.41
PDLIM5-221ENST00000542407 HIVEP3Q5T1R4 2406 aa6.25□□□□□ -1.41
PDLIM5-221ENST00000542407 IGLV2-23P01705 113 aa6.24□□□□□ -1.41
PDLIM5-221ENST00000542407 SAA1P0DJI8 122 aaPredicted RBP6.24□□□□□ -1.41
PDLIM5-221ENST00000542407 SLC25A2Q9BXI2 301 aa6.24□□□□□ -1.41
PDLIM5-221ENST00000542407 CFAP46Q8IYW2 2715 aa6.24□□□□□ -1.41
PDLIM5-221ENST00000542407 PGPA6NDG6 321 aa6.24□□□□□ -1.41
PDLIM5-221ENST00000542407 COX7A2P2O60397 106 aa6.24□□□□□ -1.41
PDLIM5-221ENST00000542407 LOXL1Q08397 574 aaPredicted RBP6.24□□□□□ -1.41
PDLIM5-221ENST00000542407 PMVKQ15126 192 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms