RNA–Protein interactions for RNA: ENST00000542155.5

GTDC1-219, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GTDC1, Length 2,677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-219ENST00000542155 G3V4G9 280 aa12.69□□□□□ -0.38
GTDC1-219ENST00000542155 RIPPLY3P57055 190 aa12.69□□□□□ -0.38
GTDC1-219ENST00000542155 ERVFC1-1P60608 527 aa12.69□□□□□ -0.38
GTDC1-219ENST00000542155 TRAV12-2A0A075B6T6 113 aa12.69□□□□□ -0.38
GTDC1-219ENST00000542155 A8MTW9 85 aa12.69□□□□□ -0.38
GTDC1-219ENST00000542155 SPINK13Q1W4C9 94 aa12.69□□□□□ -0.38
GTDC1-219ENST00000542155 NBEAL1Q6ZS30 2694 aa12.68□□□□□ -0.38
GTDC1-219ENST00000542155 CA1P00915 261 aaPredicted RBP12.68□□□□□ -0.38
GTDC1-219ENST00000542155 BTN1A1Q13410 526 aa12.68□□□□□ -0.38
GTDC1-219ENST00000542155 RHEBQ15382 184 aa12.68□□□□□ -0.38
GTDC1-219ENST00000542155 TMEM88Q6PEY1 159 aa12.68□□□□□ -0.38
GTDC1-219ENST00000542155 ZNF575Q86XF7 245 aa12.68□□□□□ -0.38
GTDC1-219ENST00000542155 Q8N1Y9 231 aa12.68□□□□□ -0.38
GTDC1-219ENST00000542155 CRISP2P16562 243 aa12.68□□□□□ -0.38
GTDC1-219ENST00000542155 SMUG1Q53HV7 270 aa12.68□□□□□ -0.38
GTDC1-219ENST00000542155 IBA57Q5T440 356 aaKnown RBP12.68□□□□□ -0.38
GTDC1-219ENST00000542155 FAM110AQ9BQ89 295 aa12.68□□□□□ -0.38
GTDC1-219ENST00000542155 NDFIP1Q9BT67 221 aa12.68□□□□□ -0.38
GTDC1-219ENST00000542155 C11orf21Q9P2W6 132 aa12.68□□□□□ -0.38
GTDC1-219ENST00000542155 DNAH3Q8TD57 4116 aa12.68□□□□□ -0.38
GTDC1-219ENST00000542155 SH2D1AO60880 128 aa12.67□□□□□ -0.38
GTDC1-219ENST00000542155 DUSP14O95147 198 aaKnown RBP12.67□□□□□ -0.38
GTDC1-219ENST00000542155 RPL19P84098 196 aaKnown RBP12.67□□□□□ -0.38
GTDC1-219ENST00000542155 CBLN2Q8IUK8 224 aa12.67□□□□□ -0.38
GTDC1-219ENST00000542155 LENEPQ9Y5L5 61 aa12.67□□□□□ -0.38
GTDC1-219ENST00000542155 V9GYV3 84 aa12.67□□□□□ -0.38
GTDC1-219ENST00000542155 B4DEV8 164 aa12.67□□□□□ -0.38
GTDC1-219ENST00000542155 RNASE4P34096 147 aaKnown RBP12.67□□□□□ -0.38
GTDC1-219ENST00000542155 OR10G8Q8NGN5 311 aa12.67□□□□□ -0.38
GTDC1-219ENST00000542155 DNHD1Q96M86 4753 aa12.67□□□□□ -0.38
GTDC1-219ENST00000542155 KLLNB2CW77 178 aa12.66□□□□□ -0.38
GTDC1-219ENST00000542155 TRPT1Q86TN4 253 aaKnown RBP12.66□□□□□ -0.38
GTDC1-219ENST00000542155 GPX1P07203 203 aa12.66□□□□□ -0.38
GTDC1-219ENST00000542155 CRXO43186 299 aaPredicted RBP12.65□□□□□ -0.38
GTDC1-219ENST00000542155 MT-ND4LP03901 98 aa12.65□□□□□ -0.38
GTDC1-219ENST00000542155 FAM162BQ5T6X4 162 aa12.65□□□□□ -0.38
GTDC1-219ENST00000542155 STHQ8IWL8 128 aa12.65□□□□□ -0.38
GTDC1-219ENST00000542155 OSTCQ9NRP0 149 aa12.65□□□□□ -0.38
GTDC1-219ENST00000542155 GFI1BQ5VTD9 330 aa12.65□□□□□ -0.38
GTDC1-219ENST00000542155 FAM231DQ6ZW35 169 aa12.65□□□□□ -0.38
GTDC1-219ENST00000542155 GTSCR1Q86UQ5 136 aa12.65□□□□□ -0.38
GTDC1-219ENST00000542155 A0A087WWC5 75 aa12.65□□□□□ -0.39
GTDC1-219ENST00000542155 RBMY1A1P0DJD3 496 aaKnown RBP12.65□□□□□ -0.39
GTDC1-219ENST00000542155 RBMY1CP0DJD4 496 aa12.65□□□□□ -0.39
GTDC1-219ENST00000542155 EGFEM1PQ0D2K5 195 aa12.65□□□□□ -0.39
GTDC1-219ENST00000542155 RBMY1FQ15415 496 aaKnown RBP12.65□□□□□ -0.39
GTDC1-219ENST00000542155 ODF3Q96PU9 254 aa12.65□□□□□ -0.39
GTDC1-219ENST00000542155 PFN1P07737 140 aaKnown RBP12.64□□□□□ -0.39
GTDC1-219ENST00000542155 GZMBP10144 247 aa12.64□□□□□ -0.39
GTDC1-219ENST00000542155 RPL35AP18077 110 aaKnown RBP12.64□□□□□ -0.39
GTDC1-219ENST00000542155 CDKN1BP46527 198 aa12.64□□□□□ -0.39
GTDC1-219ENST00000542155 CMC4P56277 68 aaPredicted RBP12.64□□□□□ -0.39
GTDC1-219ENST00000542155 TRAV12-3A0A0B4J271 114 aa12.64□□□□□ -0.39
GTDC1-219ENST00000542155 TRBV7-9A0A0J9YWB2 115 aa12.64□□□□□ -0.39
GTDC1-219ENST00000542155 ZNF705GA8MUZ8 300 aaPredicted RBP12.64□□□□□ -0.39
GTDC1-219ENST00000542155 GIG44P09565 113 aaPredicted RBP12.64□□□□□ -0.39
GTDC1-219ENST00000542155 FABP5P3A8MUU1 101 aa12.63□□□□□ -0.39
GTDC1-219ENST00000542155 ZNF324O75467 553 aaPredicted RBP12.63□□□□□ -0.39
GTDC1-219ENST00000542155 P01737 135 aa12.63□□□□□ -0.39
GTDC1-219ENST00000542155 TMSB15BA0A087X1C1 80 aa12.63□□□□□ -0.39
GTDC1-219ENST00000542155 IGKV3D-20A0A0C4DH25 116 aa12.63□□□□□ -0.39
GTDC1-219ENST00000542155 H7BYZ3 331 aa12.63□□□□□ -0.39
GTDC1-219ENST00000542155 SAMD5Q5TGI4 173 aa12.63□□□□□ -0.39
GTDC1-219ENST00000542155 ANAPC16Q96DE5 110 aa12.63□□□□□ -0.39
GTDC1-219ENST00000542155 DAZAP1Q96EP5 407 aaKnown RBP12.63□□□□□ -0.39
GTDC1-219ENST00000542155 URGCP-MRPS24S4R325 110 aa12.63□□□□□ -0.39
GTDC1-219ENST00000542155 GATCO43716 136 aaKnown RBP12.62□□□□□ -0.39
GTDC1-219ENST00000542155 LEPP41159 167 aa12.62□□□□□ -0.39
GTDC1-219ENST00000542155 Q6AWC8 147 aa12.62□□□□□ -0.39
GTDC1-219ENST00000542155 C15orf54Q8N8G6 183 aa12.62□□□□□ -0.39
GTDC1-219ENST00000542155 BIN3Q9NQY0 253 aa12.62□□□□□ -0.39
GTDC1-219ENST00000542155 XCL2Q9UBD3 114 aa12.62□□□□□ -0.39
GTDC1-219ENST00000542155 PRM2P04554 102 aa12.61□□□□□ -0.39
GTDC1-219ENST00000542155 FAM3BP58499 235 aaPredicted RBP12.61□□□□□ -0.39
GTDC1-219ENST00000542155 MUC21Q5SSG8 566 aa12.61□□□□□ -0.39
GTDC1-219ENST00000542155 OR2D3Q8NGH3 330 aa12.61□□□□□ -0.39
GTDC1-219ENST00000542155 CLUHP3Q96NS8 147 aa12.61□□□□□ -0.39
GTDC1-219ENST00000542155 CTDSP1Q9GZU7 261 aa12.61□□□□□ -0.39
GTDC1-219ENST00000542155 RPP21Q9H633 154 aaKnown RBP12.61□□□□□ -0.39
GTDC1-219ENST00000542155 TMEM242Q9NWH2 141 aa12.61□□□□□ -0.39
GTDC1-219ENST00000542155 NBEAL2Q6ZNJ1 2754 aa12.61□□□□□ -0.39
GTDC1-219ENST00000542155 C7orf71A4D174 169 aa12.61□□□□□ -0.39
GTDC1-219ENST00000542155 TCL1AP56279 114 aa12.61□□□□□ -0.39
GTDC1-219ENST00000542155 SRD5A3Q9H8P0 318 aa12.61□□□□□ -0.39
GTDC1-219ENST00000542155 ORM1P02763 201 aa12.6□□□□□ -0.39
GTDC1-219ENST00000542155 GTSF1Q8WW33 167 aa12.6□□□□□ -0.39
GTDC1-219ENST00000542155 PPP1R2P9O14990 202 aa12.59□□□□□ -0.39
GTDC1-219ENST00000542155 TSPOP30536 169 aa12.59□□□□□ -0.39
GTDC1-219ENST00000542155 YPEL4Q96NS1 127 aa12.59□□□□□ -0.39
GTDC1-219ENST00000542155 NAGKQ9UJ70 344 aa12.59□□□□□ -0.39
GTDC1-219ENST00000542155 TRAV21A0A0B4J279 112 aa12.59□□□□□ -0.39
GTDC1-219ENST00000542155 GRIFINA4D1Z8 144 aa12.58□□□□□ -0.4
GTDC1-219ENST00000542155 ANXA2RQ3ZCQ2 193 aa12.58□□□□□ -0.4
GTDC1-219ENST00000542155 LINC01559Q495D7 138 aa12.58□□□□□ -0.4
GTDC1-219ENST00000542155 IL36BQ9NZH7 164 aa12.58□□□□□ -0.4
GTDC1-219ENST00000542155 TMEM189A5PLL7 270 aa12.58□□□□□ -0.4
GTDC1-219ENST00000542155 PRB2P02812 416 aaPredicted RBP12.58□□□□□ -0.4
GTDC1-219ENST00000542155 SMCO4Q9NRQ5 59 aa12.58□□□□□ -0.4
GTDC1-219ENST00000542155 TP53TG3Q9ULZ0 132 aa12.58□□□□□ -0.4
GTDC1-219ENST00000542155 GNRH2O43555 120 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms