RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 PPP1R14DQ9NXH3 145 aa6.84□□□□□ -1.31
DDX55-208ENST00000541259 PRKDCP78527 4128 aaKnown RBP6.83□□□□□ -1.32
DDX55-208ENST00000541259 LOC102724200A0A096LPH7 203 aaPredicted RBP6.83□□□□□ -1.32
DDX55-208ENST00000541259 CRXO43186 299 aaPredicted RBP6.83□□□□□ -1.32
DDX55-208ENST00000541259 S100A9P06702 114 aaKnown RBP6.83□□□□□ -1.32
DDX55-208ENST00000541259 CRISP2P16562 243 aa6.83□□□□□ -1.32
DDX55-208ENST00000541259 ZNF80P51504 273 aaPredicted RBP6.83□□□□□ -1.32
DDX55-208ENST00000541259 BAGE2Q86Y30 109 aa6.83□□□□□ -1.32
DDX55-208ENST00000541259 ZFAND2AQ8N6M9 145 aa6.83□□□□□ -1.32
DDX55-208ENST00000541259 OCC1Q8TAD7 63 aa6.83□□□□□ -1.32
DDX55-208ENST00000541259 SMIM7Q9BQ49 75 aa6.83□□□□□ -1.32
DDX55-208ENST00000541259 XCL2Q9UBD3 114 aa6.83□□□□□ -1.32
DDX55-208ENST00000541259 NBEAL2Q6ZNJ1 2754 aa6.83□□□□□ -1.32
DDX55-208ENST00000541259 TMEM218A2RU14 115 aa6.82□□□□□ -1.32
DDX55-208ENST00000541259 FBLL1A6NHQ2 334 aaKnown RBP6.82□□□□□ -1.32
DDX55-208ENST00000541259 ZNF727A8MUV8 499 aa6.82□□□□□ -1.32
DDX55-208ENST00000541259 A8MZ25 164 aa6.82□□□□□ -1.32
DDX55-208ENST00000541259 GPX1P07203 203 aa6.82□□□□□ -1.32
DDX55-208ENST00000541259 FRMD6-AS1P0C7T7 363 aa6.82□□□□□ -1.32
DDX55-208ENST00000541259 RBMY1A1P0DJD3 496 aaKnown RBP6.82□□□□□ -1.32
DDX55-208ENST00000541259 RBMY1CP0DJD4 496 aa6.82□□□□□ -1.32
DDX55-208ENST00000541259 ADCYAP1P18509 176 aa6.82□□□□□ -1.32
DDX55-208ENST00000541259 RNASE4P34096 147 aaKnown RBP6.82□□□□□ -1.32
DDX55-208ENST00000541259 LEPP41159 167 aa6.82□□□□□ -1.32
DDX55-208ENST00000541259 GNG4P50150 75 aa6.82□□□□□ -1.32
DDX55-208ENST00000541259 CRIP1P50238 77 aa6.82□□□□□ -1.32
DDX55-208ENST00000541259 BTN1A1Q13410 526 aa6.82□□□□□ -1.32
DDX55-208ENST00000541259 RBMY1FQ15415 496 aaKnown RBP6.82□□□□□ -1.32
DDX55-208ENST00000541259 DEFB121Q5J5C9 76 aa6.82□□□□□ -1.32
DDX55-208ENST00000541259 SOHLH1Q5JUK2 328 aa6.82□□□□□ -1.32
DDX55-208ENST00000541259 GFI1BQ5VTD9 330 aa6.82□□□□□ -1.32
DDX55-208ENST00000541259 TMEM183AQ8IXX5 376 aa6.82□□□□□ -1.32
DDX55-208ENST00000541259 ZC2HC1AQ96GY0 325 aa6.82□□□□□ -1.32
DDX55-208ENST00000541259 ODF3Q96PU9 254 aa6.82□□□□□ -1.32
DDX55-208ENST00000541259 MLST8Q9BVC4 326 aa6.82□□□□□ -1.32
DDX55-208ENST00000541259 CSTL1Q9H114 145 aa6.82□□□□□ -1.32
DDX55-208ENST00000541259 ZFP30Q9Y2G7 519 aa6.82□□□□□ -1.32
DDX55-208ENST00000541259 TRAV12-3A0A0B4J271 114 aa6.81□□□□□ -1.32
DDX55-208ENST00000541259 KLLNB2CW77 178 aa6.81□□□□□ -1.32
DDX55-208ENST00000541259 C9JCJ5 164 aa6.81□□□□□ -1.32
DDX55-208ENST00000541259 K7EN84 100 aa6.81□□□□□ -1.32
DDX55-208ENST00000541259 CA1P00915 261 aaPredicted RBP6.81□□□□□ -1.32
DDX55-208ENST00000541259 MGST1P10620 155 aaKnown RBP6.81□□□□□ -1.32
DDX55-208ENST00000541259 CDKN1BP46527 198 aa6.81□□□□□ -1.32
DDX55-208ENST00000541259 OR5I1Q13606 314 aa6.81□□□□□ -1.32
DDX55-208ENST00000541259 SMUG1Q53HV7 270 aa6.81□□□□□ -1.32
DDX55-208ENST00000541259 SAPCD1Q5SSQ6 148 aa6.81□□□□□ -1.32
DDX55-208ENST00000541259 MORN3Q6PF18 240 aaPredicted RBP6.81□□□□□ -1.32
DDX55-208ENST00000541259 NDFIP1Q9BT67 221 aa6.81□□□□□ -1.32
DDX55-208ENST00000541259 LENEPQ9Y5L5 61 aa6.81□□□□□ -1.32
DDX55-208ENST00000541259 KIR2DL5BA0A0G2JN68 375 aa6.8□□□□□ -1.32
DDX55-208ENST00000541259 KIR2DL5BA0A0G2JPC4 375 aa6.8□□□□□ -1.32
DDX55-208ENST00000541259 TRBV7-9A0A0J9YWB2 115 aa6.8□□□□□ -1.32
DDX55-208ENST00000541259 C7orf71A4D174 169 aa6.8□□□□□ -1.32
DDX55-208ENST00000541259 F8W036 122 aa6.8□□□□□ -1.32
DDX55-208ENST00000541259 ZNF324O75467 553 aaPredicted RBP6.8□□□□□ -1.32
DDX55-208ENST00000541259 GCGP01275 180 aa6.8□□□□□ -1.32
DDX55-208ENST00000541259 PRM2P04554 102 aa6.8□□□□□ -1.32
DDX55-208ENST00000541259 TSPOP30536 169 aa6.8□□□□□ -1.32
DDX55-208ENST00000541259 NUTF2P61970 127 aaKnown RBP6.8□□□□□ -1.32
DDX55-208ENST00000541259 DEFA6Q01524 100 aa6.8□□□□□ -1.32
DDX55-208ENST00000541259 NDUFA5Q16718 116 aa6.8□□□□□ -1.32
DDX55-208ENST00000541259 TMEM241Q24JQ0 296 aa6.8□□□□□ -1.32
DDX55-208ENST00000541259 FAM74A3Q4VXF1 159 aa6.8□□□□□ -1.32
DDX55-208ENST00000541259 COX8CQ7Z4L0 72 aa6.8□□□□□ -1.32
DDX55-208ENST00000541259 KIR2DL5AQ8N109 375 aa6.8□□□□□ -1.32
DDX55-208ENST00000541259 C1orf158Q8N1D5 194 aa6.8□□□□□ -1.32
DDX55-208ENST00000541259 CSNK1G2-AS1Q8NCQ2 148 aa6.8□□□□□ -1.32
DDX55-208ENST00000541259 KIR2DL5BQ8NHK3 375 aa6.8□□□□□ -1.32
DDX55-208ENST00000541259 SDF2L1Q9HCN8 221 aa6.8□□□□□ -1.32
DDX55-208ENST00000541259 SH2D1AO60880 128 aa6.79□□□□□ -1.32
DDX55-208ENST00000541259 APOC4P55056 127 aa6.79□□□□□ -1.32
DDX55-208ENST00000541259 RPL23P62829 140 aaKnown RBP6.79□□□□□ -1.32
DDX55-208ENST00000541259 C10orf91Q5T1B1 145 aa6.79□□□□□ -1.32
DDX55-208ENST00000541259 Q6AWC8 147 aa6.79□□□□□ -1.32
DDX55-208ENST00000541259 PRR27Q6MZM9 219 aa6.79□□□□□ -1.32
DDX55-208ENST00000541259 LINC01551Q86U37 167 aa6.79□□□□□ -1.32
DDX55-208ENST00000541259 MRAPQ8TCY5 172 aa6.79□□□□□ -1.32
DDX55-208ENST00000541259 C11orf21Q9P2W6 132 aa6.79□□□□□ -1.32
DDX55-208ENST00000541259 NAT8Q9UHE5 227 aa6.79□□□□□ -1.32
DDX55-208ENST00000541259 IGHV3OR16-12A0A075B7B8 117 aa6.78□□□□□ -1.32
DDX55-208ENST00000541259 INSP01308 110 aa6.78□□□□□ -1.32
DDX55-208ENST00000541259 AMBPP02760 352 aa6.78□□□□□ -1.32
DDX55-208ENST00000541259 ADIRFQ15847 76 aa6.78□□□□□ -1.32
DDX55-208ENST00000541259 DEFB135Q30KP9 77 aa6.78□□□□□ -1.32
DDX55-208ENST00000541259 MUC21Q5SSG8 566 aa6.78□□□□□ -1.32
DDX55-208ENST00000541259 SBSPONQ8IVN8 264 aa6.78□□□□□ -1.32
DDX55-208ENST00000541259 SEC11CQ9BY50 192 aa6.78□□□□□ -1.32
DDX55-208ENST00000541259 RNASE7Q9H1E1 156 aaKnown RBP6.78□□□□□ -1.32
DDX55-208ENST00000541259 RETNQ9HD89 108 aa6.78□□□□□ -1.32
DDX55-208ENST00000541259 LY96Q9Y6Y9 160 aa6.78□□□□□ -1.32
DDX55-208ENST00000541259 MEGF8Q7Z7M0 2845 aa6.78□□□□□ -1.32
DDX55-208ENST00000541259 TENM3Q9P273 2699 aa6.78□□□□□ -1.32
DDX55-208ENST00000541259 MUC4Q99102 2169 aa6.77□□□□□ -1.33
DDX55-208ENST00000541259 TRAV21A0A0B4J279 112 aa6.77□□□□□ -1.33
DDX55-208ENST00000541259 C19orf71A6NCJ1 209 aa6.77□□□□□ -1.33
DDX55-208ENST00000541259 FABP5P3A8MUU1 101 aa6.77□□□□□ -1.33
DDX55-208ENST00000541259 PFN1P07737 140 aaKnown RBP6.77□□□□□ -1.33
DDX55-208ENST00000541259 FAM162BQ5T6X4 162 aa6.77□□□□□ -1.33
DDX55-208ENST00000541259 ZNF575Q86XF7 245 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms