RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 EDN2P20800 178 aa9.4□□□□□ -0.9
SMAD3-204ENST00000540846 AKR1D1P51857 326 aa9.4□□□□□ -0.9
SMAD3-204ENST00000540846 SYNJ2BPP57105 145 aa9.4□□□□□ -0.9
SMAD3-204ENST00000540846 ERCC8Q13216 396 aa9.4□□□□□ -0.9
SMAD3-204ENST00000540846 SAMD13Q5VXD3 122 aa9.4□□□□□ -0.9
SMAD3-204ENST00000540846 C9orf47Q6ZRZ4 202 aa9.4□□□□□ -0.9
SMAD3-204ENST00000540846 HIST3H2BBQ8N257 126 aa9.4□□□□□ -0.9
SMAD3-204ENST00000540846 DLX4Q92988 240 aaPredicted RBP9.4□□□□□ -0.9
SMAD3-204ENST00000540846 C20orf173Q96LM9 149 aa9.4□□□□□ -0.9
SMAD3-204ENST00000540846 PPP1R14DQ9NXH3 145 aa9.4□□□□□ -0.9
SMAD3-204ENST00000540846 XKRY2A2RUG3 117 aa9.39□□□□□ -0.91
SMAD3-204ENST00000540846 SH2D1AO60880 128 aa9.39□□□□□ -0.91
SMAD3-204ENST00000540846 ZNF138P52744 262 aa9.39□□□□□ -0.91
SMAD3-204ENST00000540846 FOXA3P55318 350 aaPredicted RBP9.39□□□□□ -0.91
SMAD3-204ENST00000540846 SMUG1Q53HV7 270 aa9.39□□□□□ -0.91
SMAD3-204ENST00000540846 TMEM78Q5T7P6 136 aa9.39□□□□□ -0.91
SMAD3-204ENST00000540846 ADAMTSL5Q6ZMM2 481 aa9.39□□□□□ -0.91
SMAD3-204ENST00000540846 ZNF738Q8NE65 137 aa9.39□□□□□ -0.91
SMAD3-204ENST00000540846 AGPAT4-IT1Q9H0P7 198 aa9.39□□□□□ -0.91
SMAD3-204ENST00000540846 IFITM10A6NMD0 228 aa9.38□□□□□ -0.91
SMAD3-204ENST00000540846 S100A8P05109 93 aa9.38□□□□□ -0.91
SMAD3-204ENST00000540846 KRTAP21-3Q3LHN1 58 aa9.38□□□□□ -0.91
SMAD3-204ENST00000540846 GFI1BQ5VTD9 330 aa9.38□□□□□ -0.91
SMAD3-204ENST00000540846 Q6AWC8 147 aa9.38□□□□□ -0.91
SMAD3-204ENST00000540846 DPF1Q92782 380 aa9.38□□□□□ -0.91
SMAD3-204ENST00000540846 LENEPQ9Y5L5 61 aa9.38□□□□□ -0.91
SMAD3-204ENST00000540846 ANK2Q01484 3957 aa9.38□□□□□ -0.91
SMAD3-204ENST00000540846 OVOL1O14753 267 aa9.37□□□□□ -0.91
SMAD3-204ENST00000540846 GZMBP10144 247 aa9.37□□□□□ -0.91
SMAD3-204ENST00000540846 ZNF80P51504 273 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-204ENST00000540846 RPL11P62913 178 aaKnown RBP9.37□□□□□ -0.91
SMAD3-204ENST00000540846 HBBP68871 147 aa9.37□□□□□ -0.91
SMAD3-204ENST00000540846 GDF5OSQ5U4N7 250 aa9.37□□□□□ -0.91
SMAD3-204ENST00000540846 C12orf54Q6X4T0 127 aa9.37□□□□□ -0.91
SMAD3-204ENST00000540846 SPATA3Q8NHX4 192 aa9.37□□□□□ -0.91
SMAD3-204ENST00000540846 PKD1L1Q8TDX9 2849 aa9.37□□□□□ -0.91
SMAD3-204ENST00000540846 RAB4BP61018 213 aa9.37□□□□□ -0.91
SMAD3-204ENST00000540846 SHISA2Q6UWI4 295 aa9.37□□□□□ -0.91
SMAD3-204ENST00000540846 C3orf56Q8N813 242 aa9.37□□□□□ -0.91
SMAD3-204ENST00000540846 LINC00482Q8N8I6 264 aa9.37□□□□□ -0.91
SMAD3-204ENST00000540846 DCANP1Q8TF63 244 aa9.37□□□□□ -0.91
SMAD3-204ENST00000540846 PGLYRP4Q96LB8 373 aa9.37□□□□□ -0.91
SMAD3-204ENST00000540846 TRRAPQ9Y4A5 3859 aa9.37□□□□□ -0.91
SMAD3-204ENST00000540846 TMEM189A5PLL7 270 aa9.36□□□□□ -0.91
SMAD3-204ENST00000540846 C2orf70A6NJV1 201 aa9.36□□□□□ -0.91
SMAD3-204ENST00000540846 RPS20P60866 119 aaKnown RBP9.36□□□□□ -0.91
SMAD3-204ENST00000540846 OR9G4Q8NGQ1 327 aa9.36□□□□□ -0.91
SMAD3-204ENST00000540846 APCSP02743 223 aa9.35□□□□□ -0.91
SMAD3-204ENST00000540846 CSN3P07498 182 aa9.35□□□□□ -0.91
SMAD3-204ENST00000540846 ID1P41134 155 aa9.35□□□□□ -0.91
SMAD3-204ENST00000540846 SLAQ13239 276 aa9.35□□□□□ -0.91
SMAD3-204ENST00000540846 LINC00518Q8N0U6 118 aa9.35□□□□□ -0.91
SMAD3-204ENST00000540846 OR10J6PQ8NGY7 276 aa9.35□□□□□ -0.91
SMAD3-204ENST00000540846 IGKV3-7A0A075B6H7 116 aa9.34□□□□□ -0.91
SMAD3-204ENST00000540846 A0A1B0GUT8 65 aa9.34□□□□□ -0.91
SMAD3-204ENST00000540846 FABP5P3A8MUU1 101 aa9.34□□□□□ -0.91
SMAD3-204ENST00000540846 SMIM6P0DI80 62 aa9.34□□□□□ -0.91
SMAD3-204ENST00000540846 CRISP2P16562 243 aa9.34□□□□□ -0.91
SMAD3-204ENST00000540846 CAMPP49913 170 aa9.34□□□□□ -0.91
SMAD3-204ENST00000540846 HIST1H1AQ02539 215 aaPredicted RBP9.34□□□□□ -0.91
SMAD3-204ENST00000540846 LINC01559Q495D7 138 aa9.34□□□□□ -0.91
SMAD3-204ENST00000540846 PDZD11Q5EBL8 140 aa9.34□□□□□ -0.91
SMAD3-204ENST00000540846 GATD1Q8NB37 220 aa9.34□□□□□ -0.91
SMAD3-204ENST00000540846 LINC00477Q96M19 166 aa9.34□□□□□ -0.91
SMAD3-204ENST00000540846 TRBV7-9A0A0J9YWB2 115 aa9.33□□□□□ -0.92
SMAD3-204ENST00000540846 A0A1B0GW15 77 aa9.33□□□□□ -0.92
SMAD3-204ENST00000540846 GRIFINA4D1Z8 144 aa9.33□□□□□ -0.92
SMAD3-204ENST00000540846 K7EQG2 157 aa9.33□□□□□ -0.92
SMAD3-204ENST00000540846 S100A2P29034 98 aa9.33□□□□□ -0.92
SMAD3-204ENST00000540846 CTRLP40313 264 aa9.33□□□□□ -0.92
SMAD3-204ENST00000540846 Q0VG73 95 aa9.33□□□□□ -0.92
SMAD3-204ENST00000540846 OR8A1Q8NGG7 326 aa9.33□□□□□ -0.92
SMAD3-204ENST00000540846 HIST1H2BLQ99880 126 aa9.33□□□□□ -0.92
SMAD3-204ENST00000540846 MS4A6AQ9H2W1 248 aa9.33□□□□□ -0.92
SMAD3-204ENST00000540846 TMSB15BA0A087X1C1 80 aa9.33□□□□□ -0.92
SMAD3-204ENST00000540846 M0QZ24 198 aa9.33□□□□□ -0.92
SMAD3-204ENST00000540846 PF4P02776 101 aa9.33□□□□□ -0.92
SMAD3-204ENST00000540846 ARMS2P0C7Q2 107 aa9.33□□□□□ -0.92
SMAD3-204ENST00000540846 IGLC6P0CF74 106 aa9.33□□□□□ -0.92
SMAD3-204ENST00000540846 RIGQ13278 110 aa9.33□□□□□ -0.92
SMAD3-204ENST00000540846 ZNF575Q86XF7 245 aa9.33□□□□□ -0.92
SMAD3-204ENST00000540846 ZFAND2AQ8N6M9 145 aa9.33□□□□□ -0.92
SMAD3-204ENST00000540846 FAM19A4Q96LR4 140 aa9.33□□□□□ -0.92
SMAD3-204ENST00000540846 SIGLEC8Q9NYZ4 499 aa9.33□□□□□ -0.92
SMAD3-204ENST00000540846 PEMTQ9UBM1 199 aa9.33□□□□□ -0.92
SMAD3-204ENST00000540846 TP53TG3Q9ULZ0 132 aa9.33□□□□□ -0.92
SMAD3-204ENST00000540846 SELENOKQ9Y6D0 94 aa9.33□□□□□ -0.92
SMAD3-204ENST00000540846 ZNF705DP0CH99 300 aaPredicted RBP9.32□□□□□ -0.92
SMAD3-204ENST00000540846 ZNF705BP0CI00 300 aaPredicted RBP9.32□□□□□ -0.92
SMAD3-204ENST00000540846 SRIP30626 198 aa9.32□□□□□ -0.92
SMAD3-204ENST00000540846 KIAA1644Q3SXP7 199 aa9.32□□□□□ -0.92
SMAD3-204ENST00000540846 OR10J3Q5JRS4 329 aa9.32□□□□□ -0.92
SMAD3-204ENST00000540846 APRG1Q8IVJ8 170 aa9.32□□□□□ -0.92
SMAD3-204ENST00000540846 BORCS7Q96B45 105 aa9.32□□□□□ -0.92
SMAD3-204ENST00000540846 SSBP4Q9BWG4 385 aaPredicted RBP9.32□□□□□ -0.92
SMAD3-204ENST00000540846 F6UB75 175 aa9.31□□□□□ -0.92
SMAD3-204ENST00000540846 AMBPP02760 352 aa9.31□□□□□ -0.92
SMAD3-204ENST00000540846 ORM1P02763 201 aa9.31□□□□□ -0.92
SMAD3-204ENST00000540846 ESDP10768 282 aa9.31□□□□□ -0.92
SMAD3-204ENST00000540846 FABP4P15090 132 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms