RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 PAXXQ9BUH6 204 aa9.67□□□□□ -0.86
SNHG1-213ENST00000540725 SLC25A31Q9H0C2 315 aa9.67□□□□□ -0.86
SNHG1-213ENST00000540725 SIX6O95475 246 aa9.66□□□□□ -0.86
SNHG1-213ENST00000540725 OR10J4P0C629 311 aa9.66□□□□□ -0.86
SNHG1-213ENST00000540725 ZNF138P52744 262 aa9.66□□□□□ -0.86
SNHG1-213ENST00000540725 ZNF415Q09FC8 603 aa9.66□□□□□ -0.86
SNHG1-213ENST00000540725 FXYD5Q96DB9 178 aa9.66□□□□□ -0.86
SNHG1-213ENST00000540725 MRPL32Q9BYC8 188 aaKnown RBP9.66□□□□□ -0.86
SNHG1-213ENST00000540725 KCNIP2Q9NS61 270 aa9.66□□□□□ -0.86
SNHG1-213ENST00000540725 OR5AC2Q9NZP5 309 aa9.66□□□□□ -0.86
SNHG1-213ENST00000540725 TRBV7-9A0A0J9YWB2 115 aa9.65□□□□□ -0.86
SNHG1-213ENST00000540725 E5RGE8 158 aa9.65□□□□□ -0.86
SNHG1-213ENST00000540725 CRYBA4P53673 196 aa9.65□□□□□ -0.86
SNHG1-213ENST00000540725 SLAQ13239 276 aa9.65□□□□□ -0.86
SNHG1-213ENST00000540725 ASAH1Q13510 395 aa9.65□□□□□ -0.86
SNHG1-213ENST00000540725 FHL2Q14192 279 aa9.65□□□□□ -0.86
SNHG1-213ENST00000540725 C8orf49Q96NF6 230 aa9.65□□□□□ -0.86
SNHG1-213ENST00000540725 WDR61Q9GZS3 305 aaKnown RBP9.65□□□□□ -0.86
SNHG1-213ENST00000540725 HHLA3Q9XRX5 114 aa9.65□□□□□ -0.86
SNHG1-213ENST00000540725 OR7C2O60412 319 aa9.64□□□□□ -0.87
SNHG1-213ENST00000540725 PRAF2O60831 178 aa9.64□□□□□ -0.87
SNHG1-213ENST00000540725 MRPL23Q16540 153 aaKnown RBP9.64□□□□□ -0.87
SNHG1-213ENST00000540725 LRRC37A5PQ49AS3 106 aa9.64□□□□□ -0.87
SNHG1-213ENST00000540725 MUC21Q5SSG8 566 aa9.64□□□□□ -0.87
SNHG1-213ENST00000540725 NMES1Q9C002 83 aa9.64□□□□□ -0.87
SNHG1-213ENST00000540725 RBAKDNA6NC62 111 aa9.63□□□□□ -0.87
SNHG1-213ENST00000540725 H0YIZ8 118 aa9.63□□□□□ -0.87
SNHG1-213ENST00000540725 CSN1S1P47710 185 aa9.63□□□□□ -0.87
SNHG1-213ENST00000540725 ERVFC1-1P60608 527 aa9.63□□□□□ -0.87
SNHG1-213ENST00000540725 RANP62826 216 aaKnown RBP9.63□□□□□ -0.87
SNHG1-213ENST00000540725 ZNF266Q14584 549 aa9.63□□□□□ -0.87
SNHG1-213ENST00000540725 LYPD5Q6UWN5 251 aa9.63□□□□□ -0.87
SNHG1-213ENST00000540725 NEGR1Q7Z3B1 354 aa9.63□□□□□ -0.87
SNHG1-213ENST00000540725 TNFRSF18Q9Y5U5 241 aa9.63□□□□□ -0.87
SNHG1-213ENST00000540725 DMBT1Q9UGM3 2413 aaPredicted RBP9.63□□□□□ -0.87
SNHG1-213ENST00000540725 TRGV4A0A0C4DH28 118 aa9.63□□□□□ -0.87
SNHG1-213ENST00000540725 C17orf112F2Z3M2 114 aa9.63□□□□□ -0.87
SNHG1-213ENST00000540725 EREGO14944 169 aa9.63□□□□□ -0.87
SNHG1-213ENST00000540725 UBE2L3P68036 154 aaKnown RBP9.63□□□□□ -0.87
SNHG1-213ENST00000540725 LYPD1Q8N2G4 141 aa9.63□□□□□ -0.87
SNHG1-213ENST00000540725 ENKURQ8TC29 256 aa9.63□□□□□ -0.87
SNHG1-213ENST00000540725 PGPEP1Q9NXJ5 209 aa9.63□□□□□ -0.87
SNHG1-213ENST00000540725 MDFICQ9P1T7 246 aa9.63□□□□□ -0.87
SNHG1-213ENST00000540725 SFTA3P0C7M3 94 aa9.62□□□□□ -0.87
SNHG1-213ENST00000540725 FUSP35637 526 aaKnown RBP eCLIP9.62□□□□□ -0.87
SNHG1-213ENST00000540725 TMEM183BQ1AE95 376 aa9.62□□□□□ -0.87
SNHG1-213ENST00000540725 Q6AWC8 147 aa9.62□□□□□ -0.87
SNHG1-213ENST00000540725 TMEM183AQ8IXX5 376 aa9.62□□□□□ -0.87
SNHG1-213ENST00000540725 ZNF479Q96JC4 524 aa9.62□□□□□ -0.87
SNHG1-213ENST00000540725 K7EQD1 137 aa9.61□□□□□ -0.87
SNHG1-213ENST00000540725 SRIP30626 198 aa9.61□□□□□ -0.87
SNHG1-213ENST00000540725 CYCSP99999 105 aaKnown RBP9.61□□□□□ -0.87
SNHG1-213ENST00000540725 FFAR4Q5NUL3 377 aa9.61□□□□□ -0.87
SNHG1-213ENST00000540725 CDPF1Q6NVV7 123 aa9.61□□□□□ -0.87
SNHG1-213ENST00000540725 NFE4Q86UQ8 179 aa9.61□□□□□ -0.87
SNHG1-213ENST00000540725 IQCF2Q8IXL9 164 aa9.61□□□□□ -0.87
SNHG1-213ENST00000540725 OR10G4Q8NGN3 311 aa9.61□□□□□ -0.87
SNHG1-213ENST00000540725 ATP5SQ99766 215 aa9.61□□□□□ -0.87
SNHG1-213ENST00000540725 SPXQ9BT56 116 aa9.61□□□□□ -0.87
SNHG1-213ENST00000540725 LENEPQ9Y5L5 61 aa9.61□□□□□ -0.87
SNHG1-213ENST00000540725 LY96Q9Y6Y9 160 aa9.61□□□□□ -0.87
SNHG1-213ENST00000540725 FAT1Q14517 4588 aa9.6□□□□□ -0.87
SNHG1-213ENST00000540725 TRGV11A0A075B6L2 103 aa9.6□□□□□ -0.87
SNHG1-213ENST00000540725 TRAV9-2A0A087WT02 112 aa9.6□□□□□ -0.87
SNHG1-213ENST00000540725 DIRC3C9JPN6 131 aa9.6□□□□□ -0.87
SNHG1-213ENST00000540725 DNAH10OSP0CZ25 163 aa9.6□□□□□ -0.87
SNHG1-213ENST00000540725 KHDC3LQ587J8 217 aa9.6□□□□□ -0.87
SNHG1-213ENST00000540725 FAM159AQ6UWV7 190 aa9.6□□□□□ -0.87
SNHG1-213ENST00000540725 WFDC10BQ8IUB3 73 aa9.6□□□□□ -0.87
SNHG1-213ENST00000540725 PCNPQ8WW12 178 aaKnown RBP9.6□□□□□ -0.87
SNHG1-213ENST00000540725 RASL10AQ92737 203 aa9.6□□□□□ -0.87
SNHG1-213ENST00000540725 GYPEP15421 78 aa9.59□□□□□ -0.87
SNHG1-213ENST00000540725 H2BFSP57053 126 aa9.59□□□□□ -0.87
SNHG1-213ENST00000540725 TAS2R45P59539 299 aa9.59□□□□□ -0.87
SNHG1-213ENST00000540725 AKAP14Q86UN6 197 aa9.59□□□□□ -0.87
SNHG1-213ENST00000540725 PPP1R1CQ8WVI7 109 aa9.59□□□□□ -0.87
SNHG1-213ENST00000540725 MSRB1Q9NZV6 116 aa9.59□□□□□ -0.87
SNHG1-213ENST00000540725 HSPB11Q9Y547 144 aa9.59□□□□□ -0.87
SNHG1-213ENST00000540725 HERC1Q15751 4861 aa9.58□□□□□ -0.88
SNHG1-213ENST00000540725 A0A087WTM6 91 aa9.58□□□□□ -0.88
SNHG1-213ENST00000540725 EPM2AB3EWF7 344 aa9.58□□□□□ -0.88
SNHG1-213ENST00000540725 INMT-MINDY4F8WBC2 141 aa9.58□□□□□ -0.88
SNHG1-213ENST00000540725 ORM1P02763 201 aa9.58□□□□□ -0.88
SNHG1-213ENST00000540725 TMED6Q8WW62 240 aa9.58□□□□□ -0.88
SNHG1-213ENST00000540725 HYLS1Q96M11 299 aa9.58□□□□□ -0.88
SNHG1-213ENST00000540725 NAGKQ9UJ70 344 aa9.58□□□□□ -0.88
SNHG1-213ENST00000540725 TRAV4A0A0B4J268 109 aa9.57□□□□□ -0.88
SNHG1-213ENST00000540725 K7EP13 123 aa9.57□□□□□ -0.88
SNHG1-213ENST00000540725 EIF3GO75821 320 aaKnown RBP eCLIP9.57□□□□□ -0.88
SNHG1-213ENST00000540725 IFNA5P01569 189 aa9.57□□□□□ -0.88
SNHG1-213ENST00000540725 EVI2AP22794 236 aa9.57□□□□□ -0.88
SNHG1-213ENST00000540725 TDRG1Q3Y452 100 aa9.57□□□□□ -0.88
SNHG1-213ENST00000540725 SCGB1C1Q8TD33 95 aa9.57□□□□□ -0.88
SNHG1-213ENST00000540725 FAM210AQ96ND0 272 aa9.57□□□□□ -0.88
SNHG1-213ENST00000540725 TXNDC17Q9BRA2 123 aa9.57□□□□□ -0.88
SNHG1-213ENST00000540725 SMIM3Q9BZL3 60 aa9.57□□□□□ -0.88
SNHG1-213ENST00000540725 OTORQ9NRC9 128 aa9.57□□□□□ -0.88
SNHG1-213ENST00000540725 RPH3ALQ9UNE2 315 aa9.57□□□□□ -0.88
SNHG1-213ENST00000540725 VPS13BQ7Z7G8 4022 aa9.56□□□□□ -0.88
SNHG1-213ENST00000540725 FLG2Q5D862 2391 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms