RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 HIGD1BQ9P298 99 aa9.48□□□□□ -0.89
NPC1-202ENST00000540608 GATA1P15976 413 aaPredicted RBP9.47□□□□□ -0.89
NPC1-202ENST00000540608 RAB37Q96AX2 223 aa9.47□□□□□ -0.89
NPC1-202ENST00000540608 SMPXQ9UHP9 88 aa9.47□□□□□ -0.89
NPC1-202ENST00000540608 IGLV2-18A0A075B6J9 118 aa9.47□□□□□ -0.89
NPC1-202ENST00000540608 IGKV2D-26A0A0A0MRZ7 120 aa9.47□□□□□ -0.89
NPC1-202ENST00000540608 IGKCP01834 107 aa9.47□□□□□ -0.89
NPC1-202ENST00000540608 UCNP55089 124 aa9.47□□□□□ -0.89
NPC1-202ENST00000540608 NAA38Q9BRA0 125 aaKnown RBP9.47□□□□□ -0.89
NPC1-202ENST00000540608 AGPAT4-IT1Q9H0P7 198 aa9.47□□□□□ -0.89
NPC1-202ENST00000540608 A0A1W2PPM0 123 aa9.46□□□□□ -0.89
NPC1-202ENST00000540608 CLPSL1A2RUU4 121 aa9.46□□□□□ -0.89
NPC1-202ENST00000540608 ATP5LO75964 103 aa9.46□□□□□ -0.89
NPC1-202ENST00000540608 ZFP36P26651 326 aaKnown RBP9.46□□□□□ -0.89
NPC1-202ENST00000540608 KLRB1Q12918 225 aa9.46□□□□□ -0.89
NPC1-202ENST00000540608 TMEM158Q8WZ71 300 aa9.46□□□□□ -0.89
NPC1-202ENST00000540608 PRSS47A8MTI9 375 aa9.46□□□□□ -0.9
NPC1-202ENST00000540608 SMIM13P0DJ93 91 aa9.46□□□□□ -0.9
NPC1-202ENST00000540608 C11orf21Q9P2W6 132 aa9.46□□□□□ -0.9
NPC1-202ENST00000540608 SIRPDQ9H106 197 aa9.46□□□□□ -0.9
NPC1-202ENST00000540608 IGHV3-66A0A0C4DH42 116 aa9.45□□□□□ -0.9
NPC1-202ENST00000540608 SAP30O75446 220 aa9.45□□□□□ -0.9
NPC1-202ENST00000540608 DPM2O94777 84 aa9.45□□□□□ -0.9
NPC1-202ENST00000540608 ECSCRQ19T08 205 aa9.45□□□□□ -0.9
NPC1-202ENST00000540608 OR5A1Q8NGJ0 315 aa9.45□□□□□ -0.9
NPC1-202ENST00000540608 FOXC2Q99958 501 aa9.45□□□□□ -0.9
NPC1-202ENST00000540608 MEGF9Q9H1U4 602 aa9.45□□□□□ -0.9
NPC1-202ENST00000540608 TRAV8-2A0A0B4J237 113 aa9.45□□□□□ -0.9
NPC1-202ENST00000540608 A0A1W2PPR1 153 aa9.45□□□□□ -0.9
NPC1-202ENST00000540608 MRPL53Q96EL3 112 aaKnown RBP9.45□□□□□ -0.9
NPC1-202ENST00000540608 CSTL1Q9H114 145 aa9.45□□□□□ -0.9
NPC1-202ENST00000540608 HIF1ANQ9NWT6 349 aa9.45□□□□□ -0.9
NPC1-202ENST00000540608 ATP6V0E1O15342 81 aa9.44□□□□□ -0.9
NPC1-202ENST00000540608 TRGV3P03979 118 aa9.44□□□□□ -0.9
NPC1-202ENST00000540608 SMIM17P0DL12 118 aa9.44□□□□□ -0.9
NPC1-202ENST00000540608 TMEM78Q5T7P6 136 aa9.44□□□□□ -0.9
NPC1-202ENST00000540608 CLEC19AQ6UXS0 136 aa9.44□□□□□ -0.9
NPC1-202ENST00000540608 SPCS1Q9Y6A9 102 aa9.44□□□□□ -0.9
NPC1-202ENST00000540608 IGHV7-4-1A0A0J9YVY3 117 aa9.44□□□□□ -0.9
NPC1-202ENST00000540608 TMEM8BA6NDV4 472 aa9.44□□□□□ -0.9
NPC1-202ENST00000540608 GCSHP23434 173 aa9.44□□□□□ -0.9
NPC1-202ENST00000540608 NEGR1Q7Z3B1 354 aa9.44□□□□□ -0.9
NPC1-202ENST00000540608 NRACQ8N912 160 aa9.44□□□□□ -0.9
NPC1-202ENST00000540608 AJUBAQ96IF1 538 aa9.44□□□□□ -0.9
NPC1-202ENST00000540608 CCDC140Q96MF4 163 aa9.44□□□□□ -0.9
NPC1-202ENST00000540608 CHAC1Q9BUX1 264 aa9.44□□□□□ -0.9
NPC1-202ENST00000540608 IGHV4-4A0A075B6R2 117 aa9.43□□□□□ -0.9
NPC1-202ENST00000540608 G3V4G9 280 aa9.43□□□□□ -0.9
NPC1-202ENST00000540608 FABP2P12104 132 aa9.43□□□□□ -0.9
NPC1-202ENST00000540608 HLA-DRB4P13762 266 aa9.43□□□□□ -0.9
NPC1-202ENST00000540608 LAGE3Q14657 143 aa9.43□□□□□ -0.9
NPC1-202ENST00000540608 SAMD5Q5TGI4 173 aa9.43□□□□□ -0.9
NPC1-202ENST00000540608 C9orf47Q6ZRZ4 202 aa9.43□□□□□ -0.9
NPC1-202ENST00000540608 GTSCR1Q86UQ5 136 aa9.43□□□□□ -0.9
NPC1-202ENST00000540608 MYOZ3Q8TDC0 251 aa9.43□□□□□ -0.9
NPC1-202ENST00000540608 HLA-DRB4X5D2U9 266 aa9.43□□□□□ -0.9
NPC1-202ENST00000540608 TRBV25-1A0A075B6N4 114 aa9.43□□□□□ -0.9
NPC1-202ENST00000540608 UBE2E1P51965 193 aa9.43□□□□□ -0.9
NPC1-202ENST00000540608 FXYD2P54710 66 aa9.43□□□□□ -0.9
NPC1-202ENST00000540608 TM4SF20Q53R12 229 aa9.43□□□□□ -0.9
NPC1-202ENST00000540608 ZC2HC1BQ5TFG8 222 aa9.43□□□□□ -0.9
NPC1-202ENST00000540608 EEF1AKMT3Q96AZ1 226 aa9.43□□□□□ -0.9
NPC1-202ENST00000540608 METTL26Q96S19 204 aa9.43□□□□□ -0.9
NPC1-202ENST00000540608 TTTY13Q9BZ97 58 aa9.43□□□□□ -0.9
NPC1-202ENST00000540608 COL6A6A6NMZ7 2263 aa9.42□□□□□ -0.9
NPC1-202ENST00000540608 WNK2Q9Y3S1 2297 aa9.42□□□□□ -0.9
NPC1-202ENST00000540608 MED13LQ71F56 2210 aa9.42□□□□□ -0.9
NPC1-202ENST00000540608 IGHV3OR16-13A0A075B7E8 117 aa9.42□□□□□ -0.9
NPC1-202ENST00000540608 TRBV7-1A0A0A6YYK4 115 aa9.42□□□□□ -0.9
NPC1-202ENST00000540608 IGHV3-74A0A0B4J1X5 117 aa9.42□□□□□ -0.9
NPC1-202ENST00000540608 C8orf86Q6ZUL3 223 aa9.42□□□□□ -0.9
NPC1-202ENST00000540608 TM2D2Q9BX73 214 aa9.42□□□□□ -0.9
NPC1-202ENST00000540608 TMEM160Q9NX00 188 aa9.42□□□□□ -0.9
NPC1-202ENST00000540608 SELENOKQ9Y6D0 94 aa9.42□□□□□ -0.9
NPC1-202ENST00000540608 U3KQE9 123 aa9.42□□□□□ -0.9
NPC1-202ENST00000540608 TRAV40A0A0B4J280 105 aa9.41□□□□□ -0.9
NPC1-202ENST00000540608 G3V318 75 aa9.41□□□□□ -0.9
NPC1-202ENST00000540608 SRSF1Q07955 248 aaKnown RBP eCLIP9.41□□□□□ -0.9
NPC1-202ENST00000540608 LINC01548A6NM66 108 aa9.41□□□□□ -0.9
NPC1-202ENST00000540608 MRPL35Q9NZE8 188 aaKnown RBP9.41□□□□□ -0.9
NPC1-202ENST00000540608 TRAV26-2A0A0B4J265 109 aa9.41□□□□□ -0.9
NPC1-202ENST00000540608 SPANXN1Q5VSR9 72 aa9.41□□□□□ -0.9
NPC1-202ENST00000540608 CEND1Q8N111 149 aa9.41□□□□□ -0.9
NPC1-202ENST00000540608 PHLDA1Q8WV24 401 aaPredicted RBP9.41□□□□□ -0.9
NPC1-202ENST00000540608 UFC1Q9Y3C8 167 aa9.41□□□□□ -0.9
NPC1-202ENST00000540608 A0A087WX48 190 aa9.4□□□□□ -0.9
NPC1-202ENST00000540608 IGHV3-49A0A0A0MS15 119 aa9.4□□□□□ -0.9
NPC1-202ENST00000540608 SPTBN1Q01082 2364 aaKnown RBP9.4□□□□□ -0.9
NPC1-202ENST00000540608 ZNF207O43670 478 aaKnown RBP9.4□□□□□ -0.91
NPC1-202ENST00000540608 SAA4P35542 130 aa9.4□□□□□ -0.91
NPC1-202ENST00000540608 ZFHX3Q15911 3703 aa9.39□□□□□ -0.91
NPC1-202ENST00000540608 CENPVL3A0A0U1RRI6 287 aa9.39□□□□□ -0.91
NPC1-202ENST00000540608 Q6ZQT7 251 aa9.39□□□□□ -0.91
NPC1-202ENST00000540608 MAPKAPK5-AS1Q8N8E1 139 aa9.39□□□□□ -0.91
NPC1-202ENST00000540608 MRAP2Q96G30 205 aa9.39□□□□□ -0.91
NPC1-202ENST00000540608 ATP5G2Q06055 141 aa9.39□□□□□ -0.91
NPC1-202ENST00000540608 TAL2Q16559 108 aa9.38□□□□□ -0.91
NPC1-202ENST00000540608 C16orf92Q96LL3 132 aa9.38□□□□□ -0.91
NPC1-202ENST00000540608 LENEPQ9Y5L5 61 aa9.38□□□□□ -0.91
NPC1-202ENST00000540608 K7ERJ3 54 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms