RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 ZNF562Q6V9R5 426 aa6.9□□□□□ -1.3
DDB1-217ENST00000540166 Q6ZUT4 128 aa6.9□□□□□ -1.3
DDB1-217ENST00000540166 Q86TA4 180 aa6.9□□□□□ -1.3
DDB1-217ENST00000540166 HIGD1BQ9P298 99 aa6.9□□□□□ -1.3
DDB1-217ENST00000540166 ITPR2Q14571 2701 aa6.9□□□□□ -1.31
DDB1-217ENST00000540166 TRBV20-1A0A075B6N2 111 aa6.9□□□□□ -1.31
DDB1-217ENST00000540166 NPIPB5A8MRT5 1133 aa6.9□□□□□ -1.31
DDB1-217ENST00000540166 E9PLD3 99 aa6.9□□□□□ -1.31
DDB1-217ENST00000540166 LYZL1Q6UWQ5 148 aa6.9□□□□□ -1.31
DDB1-217ENST00000540166 IL17RELQ6ZVW7 336 aa6.9□□□□□ -1.31
DDB1-217ENST00000540166 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.9□□□□□ -1.31
DDB1-217ENST00000540166 RNF7Q9UBF6 113 aa6.9□□□□□ -1.31
DDB1-217ENST00000540166 UBR5O95071 2799 aaPredicted RBP6.89□□□□□ -1.31
DDB1-217ENST00000540166 RPL7P18124 248 aaKnown RBP6.89□□□□□ -1.31
DDB1-217ENST00000540166 EXOC3-AS1Q8N2X6 119 aa6.89□□□□□ -1.31
DDB1-217ENST00000540166 RASL11BQ9BPW5 248 aa6.89□□□□□ -1.31
DDB1-217ENST00000540166 ZNF134P52741 427 aa6.89□□□□□ -1.31
DDB1-217ENST00000540166 FOXE3Q13461 319 aa6.89□□□□□ -1.31
DDB1-217ENST00000540166 OSR1Q8TAX0 266 aaPredicted RBP6.89□□□□□ -1.31
DDB1-217ENST00000540166 GLMPQ8WWB7 406 aa6.89□□□□□ -1.31
DDB1-217ENST00000540166 TRAV40A0A0B4J280 105 aa6.89□□□□□ -1.31
DDB1-217ENST00000540166 SHISA9B4DS77 424 aa6.89□□□□□ -1.31
DDB1-217ENST00000540166 ADIPOQQ15848 244 aa6.89□□□□□ -1.31
DDB1-217ENST00000540166 Q8TCH9 128 aa6.89□□□□□ -1.31
DDB1-217ENST00000540166 NXT2Q9NPJ8 142 aaKnown RBP6.89□□□□□ -1.31
DDB1-217ENST00000540166 NCKAP5O14513 1909 aa6.88□□□□□ -1.31
DDB1-217ENST00000540166 IGKV1D-17A0A075B6S4 117 aa6.88□□□□□ -1.31
DDB1-217ENST00000540166 TMEM213A2RRL7 107 aa6.88□□□□□ -1.31
DDB1-217ENST00000540166 H7C2G1 150 aa6.88□□□□□ -1.31
DDB1-217ENST00000540166 FAM106CPP0CH98 169 aa6.88□□□□□ -1.31
DDB1-217ENST00000540166 LOXL1Q08397 574 aaPredicted RBP6.88□□□□□ -1.31
DDB1-217ENST00000540166 TAL2Q16559 108 aa6.88□□□□□ -1.31
DDB1-217ENST00000540166 FAM106AQ4KMX7 169 aa6.88□□□□□ -1.31
DDB1-217ENST00000540166 FAM104BQ5XKR9 115 aa6.88□□□□□ -1.31
DDB1-217ENST00000540166 LINC00322Q6ZN03 302 aaPredicted RBP6.88□□□□□ -1.31
DDB1-217ENST00000540166 C11orf53Q8IXP5 236 aa6.88□□□□□ -1.31
DDB1-217ENST00000540166 C17orf100A8MU93 164 aa6.88□□□□□ -1.31
DDB1-217ENST00000540166 C15orf65H3BRN8 121 aa6.88□□□□□ -1.31
DDB1-217ENST00000540166 ASCL2Q99929 193 aa6.88□□□□□ -1.31
DDB1-217ENST00000540166 KLK15Q9H2R5 256 aa6.88□□□□□ -1.31
DDB1-217ENST00000540166 PCSK5Q92824 1860 aa6.88□□□□□ -1.31
DDB1-217ENST00000540166 LINC01549A6NIU2 74 aa6.88□□□□□ -1.31
DDB1-217ENST00000540166 SRRM5B3KS81 715 aa6.88□□□□□ -1.31
DDB1-217ENST00000540166 EVI2AP22794 236 aa6.88□□□□□ -1.31
DDB1-217ENST00000540166 NBEAQ8NFP9 2946 aa6.88□□□□□ -1.31
DDB1-217ENST00000540166 TEX15Q9BXT5 2789 aa6.87□□□□□ -1.31
DDB1-217ENST00000540166 PROP1O75360 226 aa6.87□□□□□ -1.31
DDB1-217ENST00000540166 ZNF688P0C7X2 276 aa6.87□□□□□ -1.31
DDB1-217ENST00000540166 EIF4EBP1Q13541 118 aaPredicted RBP6.87□□□□□ -1.31
DDB1-217ENST00000540166 TMEM95Q3KNT9 176 aa6.87□□□□□ -1.31
DDB1-217ENST00000540166 IFITM1P13164 125 aa6.87□□□□□ -1.31
DDB1-217ENST00000540166 EMP1P54849 157 aa6.87□□□□□ -1.31
DDB1-217ENST00000540166 LINC01559Q495D7 138 aa6.87□□□□□ -1.31
DDB1-217ENST00000540166 SHISA2Q6UWI4 295 aa6.87□□□□□ -1.31
DDB1-217ENST00000540166 DTX2Q86UW9 622 aa6.87□□□□□ -1.31
DDB1-217ENST00000540166 FAM216BQ8N7L0 139 aa6.87□□□□□ -1.31
DDB1-217ENST00000540166 C1orf159Q96HA4 380 aa6.87□□□□□ -1.31
DDB1-217ENST00000540166 PRSS22Q9GZN4 317 aa6.87□□□□□ -1.31
DDB1-217ENST00000540166 KLF12Q9Y4X4 402 aa6.87□□□□□ -1.31
DDB1-217ENST00000540166 PLXNB1O43157 2135 aa6.87□□□□□ -1.31
DDB1-217ENST00000540166 IGHV3-72A0A0B4J1Y9 119 aa6.87□□□□□ -1.31
DDB1-217ENST00000540166 MRPL51Q4U2R6 128 aaKnown RBP6.87□□□□□ -1.31
DDB1-217ENST00000540166 NUP37Q8NFH4 326 aa6.87□□□□□ -1.31
DDB1-217ENST00000540166 IGKV1-16P04430 117 aa6.86□□□□□ -1.31
DDB1-217ENST00000540166 HERVK_113P61574 105 aa6.86□□□□□ -1.31
DDB1-217ENST00000540166 C10orf55Q5SWW7 151 aa6.86□□□□□ -1.31
DDB1-217ENST00000540166 C10orf105Q8TEF2 133 aa6.86□□□□□ -1.31
DDB1-217ENST00000540166 FBXL15Q9H469 300 aa6.86□□□□□ -1.31
DDB1-217ENST00000540166 ZNRD1Q9P1U0 126 aa6.86□□□□□ -1.31
DDB1-217ENST00000540166 C19orf71A6NCJ1 209 aa6.86□□□□□ -1.31
DDB1-217ENST00000540166 NPYP01303 97 aa6.86□□□□□ -1.31
DDB1-217ENST00000540166 SPANXA1Q9NS26 97 aa6.86□□□□□ -1.31
DDB1-217ENST00000540166 ONECUT1Q9UBC0 465 aa6.86□□□□□ -1.31
DDB1-217ENST00000540166 CRLF1O75462 422 aa6.86□□□□□ -1.31
DDB1-217ENST00000540166 MSMBP08118 114 aa6.86□□□□□ -1.31
DDB1-217ENST00000540166 OR4C13Q8NGP0 309 aa6.86□□□□□ -1.31
DDB1-217ENST00000540166 TM2D2Q9BX73 214 aa6.86□□□□□ -1.31
DDB1-217ENST00000540166 BOD1L1Q8NFC6 3051 aa6.86□□□□□ -1.31
DDB1-217ENST00000540166 ZNF815PA8K554 130 aa6.85□□□□□ -1.31
DDB1-217ENST00000540166 NDUFB3O43676 98 aa6.85□□□□□ -1.31
DDB1-217ENST00000540166 RPL13AP40429 203 aaKnown RBP6.85□□□□□ -1.31
DDB1-217ENST00000540166 XGP55808 180 aa6.85□□□□□ -1.31
DDB1-217ENST00000540166 SSBP2P81877 361 aaPredicted RBP6.85□□□□□ -1.31
DDB1-217ENST00000540166 ATP6V0E2Q8NHE4 81 aa6.85□□□□□ -1.31
DDB1-217ENST00000540166 C8orf46Q8TAG6 207 aa6.85□□□□□ -1.31
DDB1-217ENST00000540166 PTH2Q96A98 100 aa6.85□□□□□ -1.31
DDB1-217ENST00000540166 FN1P02751 2386 aaKnown RBP6.85□□□□□ -1.31
DDB1-217ENST00000540166 IGKV3-15P01624 115 aa6.85□□□□□ -1.31
DDB1-217ENST00000540166 RPL27AP46776 148 aaKnown RBP6.85□□□□□ -1.31
DDB1-217ENST00000540166 PATE2Q6UY27 113 aa6.85□□□□□ -1.31
DDB1-217ENST00000540166 C22orf34Q6ZV56 151 aa6.85□□□□□ -1.31
DDB1-217ENST00000540166 TEN1Q86WV5 123 aa6.85□□□□□ -1.31
DDB1-217ENST00000540166 MRPL35Q9NZE8 188 aaKnown RBP6.85□□□□□ -1.31
DDB1-217ENST00000540166 FLNAP21333 2647 aaKnown RBP6.85□□□□□ -1.31
DDB1-217ENST00000540166 GATA3P23771 443 aa6.85□□□□□ -1.31
DDB1-217ENST00000540166 PPP1R27Q86WC6 154 aa6.85□□□□□ -1.31
DDB1-217ENST00000540166 MLST8Q9BVC4 326 aa6.85□□□□□ -1.31
DDB1-217ENST00000540166 MRPL20Q9BYC9 149 aaKnown RBP6.85□□□□□ -1.31
DDB1-217ENST00000540166 IGKV2D-26A0A0A0MRZ7 120 aa6.84□□□□□ -1.31
DDB1-217ENST00000540166 PLNP26678 52 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms