RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 TMEM238C9JI98 176 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 SRSF2Q01130 221 aaKnown RBP4.2□□□□□ -1.74
LRP6-203ENST00000538239 C4orf3Q8WVX3 66 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 TMEM14CQ9P0S9 112 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 LY96Q9Y6Y9 160 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 SPRY2O43597 315 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 ABCA4P78363 2273 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 PKDREJQ9NTG1 2253 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 AKAP6Q13023 2319 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 A0A1B0GWB2 263 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 F8WEM9 126 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 PLA2G2AP14555 144 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 PFN2P35080 140 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 RNASE13Q5GAN3 156 aaKnown RBP4.2□□□□□ -1.74
LRP6-203ENST00000538239 LRRC75A-AS1Q8N1F1 130 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 DYNAPQ8N1N2 210 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 NKAPP1Q8N9T2 125 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 LY6G5BQ8NDX9 201 aa4.2□□□□□ -1.74
LRP6-203ENST00000538239 SPTBN1Q01082 2364 aaKnown RBP4.2□□□□□ -1.74
LRP6-203ENST00000538239 PRSS46E5RG02 174 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 LEPROTO15243 131 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 LOXL1Q08397 574 aaPredicted RBP4.19□□□□□ -1.74
LRP6-203ENST00000538239 MSMPQ1L6U9 139 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 MRPL53Q96EL3 112 aaKnown RBP4.19□□□□□ -1.74
LRP6-203ENST00000538239 ZC2HC1AQ96GY0 325 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 GFRA4Q9GZZ7 299 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 SIRPDQ9H106 197 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 FXYD5Q96DB9 178 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 GGTLC3B5MD39 225 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 HIST1H2BKO60814 126 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 HIST1H2BJP06899 126 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 HIST1H2BOP23527 126 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 HIST1H2BBP33778 126 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 HIST1H2BDP58876 126 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 HIST1H2BCP62807 126 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 HIST2H2BEQ16778 126 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.19□□□□□ -1.74
LRP6-203ENST00000538239 WIPF2Q8TF74 440 aaPredicted RBP4.19□□□□□ -1.74
LRP6-203ENST00000538239 HIST1H2BHQ93079 126 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 HIST1H2BNQ99877 126 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 HIST1H2BMQ99879 126 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 ZFHX2Q9C0A1 2572 aaPredicted RBP4.19□□□□□ -1.74
LRP6-203ENST00000538239 MYMXA0A1B0GTQ4 84 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 H3BUT2 72 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 HLA-DRB4P13762 266 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 SPAG8Q99932 426 aaPredicted RBP4.19□□□□□ -1.74
LRP6-203ENST00000538239 FNDC4Q9H6D8 234 aaPredicted RBP4.19□□□□□ -1.74
LRP6-203ENST00000538239 LAMTOR3Q9UHA4 124 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 HLA-DRB4X5D2U9 266 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 WIPF3A6NGB9 483 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 ZNF492Q9P255 531 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 EP400Q96L91 3159 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 hDV102S1A0JD36 115 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 CD5LO43866 347 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 LY6G6DO95868 133 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 MYCNOSP40205 109 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 PMVKQ15126 192 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 ZNF114Q8NC26 417 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 SPCS1Q9Y6A9 102 aa4.19□□□□□ -1.74
LRP6-203ENST00000538239 IGHV3-30P01768 117 aa4.18□□□□□ -1.74
LRP6-203ENST00000538239 IGHV3-33P01772 117 aa4.18□□□□□ -1.74
LRP6-203ENST00000538239 IGHV3-30-3P0DP02 117 aa4.18□□□□□ -1.74
LRP6-203ENST00000538239 IGHV3-30-5P0DP03 117 aa4.18□□□□□ -1.74
LRP6-203ENST00000538239 ZNF726P1Q15940 193 aa4.18□□□□□ -1.74
LRP6-203ENST00000538239 DEFB135Q30KP9 77 aa4.18□□□□□ -1.74
LRP6-203ENST00000538239 SDHAF1A6NFY7 115 aa4.18□□□□□ -1.74
LRP6-203ENST00000538239 C2orf70A6NJV1 201 aa4.18□□□□□ -1.74
LRP6-203ENST00000538239 CRLF1O75462 422 aa4.18□□□□□ -1.74
LRP6-203ENST00000538239 RHOHQ15669 191 aa4.18□□□□□ -1.74
LRP6-203ENST00000538239 TTC32Q5I0X7 151 aa4.18□□□□□ -1.74
LRP6-203ENST00000538239 HIST2H2BDQ6DRA6 164 aa4.18□□□□□ -1.74
LRP6-203ENST00000538239 MUC6Q6W4X9 2439 aa4.18□□□□□ -1.74
LRP6-203ENST00000538239 IGHV1-24A0A0C4DH33 117 aa4.18□□□□□ -1.74
LRP6-203ENST00000538239 NXPH4O95158 308 aa4.18□□□□□ -1.74
LRP6-203ENST00000538239 SPART-AS1P0CW21 52 aa4.18□□□□□ -1.74
LRP6-203ENST00000538239 CFHR4Q92496 578 aa4.18□□□□□ -1.74
LRP6-203ENST00000538239 ERG28Q9UKR5 140 aa4.18□□□□□ -1.74
LRP6-203ENST00000538239 SMAD5-AS1Q9Y6J3 95 aa4.18□□□□□ -1.74
LRP6-203ENST00000538239 PTPRSQ13332 1948 aa4.18□□□□□ -1.74
LRP6-203ENST00000538239 C16orf74Q96GX8 76 aa4.18□□□□□ -1.74
LRP6-203ENST00000538239 MRPL51Q4U2R6 128 aaKnown RBP4.18□□□□□ -1.74
LRP6-203ENST00000538239 PRSS29PA6NIE9 313 aa4.18□□□□□ -1.74
LRP6-203ENST00000538239 K7ERU9 68 aa4.18□□□□□ -1.74
LRP6-203ENST00000538239 CCL18P55774 89 aa4.18□□□□□ -1.74
LRP6-203ENST00000538239 TMEM256Q8N2U0 113 aa4.18□□□□□ -1.74
LRP6-203ENST00000538239 C10orf126Q8N4M7 172 aa4.18□□□□□ -1.74
LRP6-203ENST00000538239 IGLV11-55A0A075B6I3 123 aa4.17□□□□□ -1.74
LRP6-203ENST00000538239 I3L2K1 104 aa4.17□□□□□ -1.74
LRP6-203ENST00000538239 XCL1P47992 114 aa4.17□□□□□ -1.74
LRP6-203ENST00000538239 SLAQ13239 276 aa4.17□□□□□ -1.74
LRP6-203ENST00000538239 POU2AF1Q16633 256 aa4.17□□□□□ -1.74
LRP6-203ENST00000538239 GYPEP15421 78 aa4.17□□□□□ -1.74
LRP6-203ENST00000538239 ICOSQ9Y6W8 199 aa4.17□□□□□ -1.74
LRP6-203ENST00000538239 ROS1P08922 2347 aa4.17□□□□□ -1.74
LRP6-203ENST00000538239 NUP210LQ5VU65 1888 aa4.17□□□□□ -1.74
LRP6-203ENST00000538239 A6NDX4 124 aa4.17□□□□□ -1.74
LRP6-203ENST00000538239 C22orf34Q6ZV56 151 aa4.17□□□□□ -1.74
LRP6-203ENST00000538239 CHAC1Q9BUX1 264 aa4.17□□□□□ -1.74
LRP6-203ENST00000538239 TRBV12-3P01733 135 aa4.17□□□□□ -1.74
LRP6-203ENST00000538239 GUSBP1Q15486 140 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms