RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 ACANP16112 2415 aa13.29□□□□□ -0.28
SNX17-210ENST00000537606 FAM181BA6NEQ2 426 aa13.29□□□□□ -0.28
SNX17-210ENST00000537606 C9orf139Q6ZV77 190 aa13.29□□□□□ -0.28
SNX17-210ENST00000537606 ZNF575Q86XF7 245 aa13.29□□□□□ -0.28
SNX17-210ENST00000537606 PSMG3-AS1Q96PY0 264 aa13.29□□□□□ -0.28
SNX17-210ENST00000537606 PDZD2O15018 2839 aa13.29□□□□□ -0.28
SNX17-210ENST00000537606 CUBNO60494 3623 aa13.29□□□□□ -0.28
SNX17-210ENST00000537606 NDFIP1Q9BT67 221 aa13.29□□□□□ -0.28
SNX17-210ENST00000537606 RHPN1-AS1Q9BWJ2 59 aa13.29□□□□□ -0.28
SNX17-210ENST00000537606 ORM1P02763 201 aa13.28□□□□□ -0.28
SNX17-210ENST00000537606 PRSS57Q6UWY2 283 aa13.28□□□□□ -0.28
SNX17-210ENST00000537606 LINC00173Q6ZV60 143 aa13.28□□□□□ -0.28
SNX17-210ENST00000537606 COX8CQ7Z4L0 72 aa13.28□□□□□ -0.28
SNX17-210ENST00000537606 ZNF702PQ9H963 129 aa13.28□□□□□ -0.28
SNX17-210ENST00000537606 EREGO14944 169 aa13.27□□□□□ -0.29
SNX17-210ENST00000537606 Q6ZQT7 251 aa13.27□□□□□ -0.29
SNX17-210ENST00000537606 SPATA12Q7Z6I5 190 aa13.27□□□□□ -0.29
SNX17-210ENST00000537606 ZNF738Q8NE65 137 aa13.27□□□□□ -0.29
SNX17-210ENST00000537606 IGHV1-24A0A0C4DH33 117 aa13.27□□□□□ -0.29
SNX17-210ENST00000537606 FBLL1A6NHQ2 334 aaKnown RBP13.27□□□□□ -0.29
SNX17-210ENST00000537606 MAJINQ3KP22 176 aa13.27□□□□□ -0.29
SNX17-210ENST00000537606 TMEM78Q5T7P6 136 aa13.27□□□□□ -0.29
SNX17-210ENST00000537606 DAZ1Q9NQZ3 744 aaKnown RBP13.27□□□□□ -0.29
SNX17-210ENST00000537606 IGHV7-4-1A0A0J9YVY3 117 aa13.26□□□□□ -0.29
SNX17-210ENST00000537606 A0A1B0GV90 55 aa13.26□□□□□ -0.29
SNX17-210ENST00000537606 RBAKDNA6NC62 111 aa13.26□□□□□ -0.29
SNX17-210ENST00000537606 BMI1P35226 326 aa13.26□□□□□ -0.29
SNX17-210ENST00000537606 ZNF705AQ6ZN79 300 aaPredicted RBP13.26□□□□□ -0.29
SNX17-210ENST00000537606 NF1P21359 2839 aa13.26□□□□□ -0.29
SNX17-210ENST00000537606 C2orf70A6NJV1 201 aa13.25□□□□□ -0.29
SNX17-210ENST00000537606 J3KRW8 73 aa13.25□□□□□ -0.29
SNX17-210ENST00000537606 LINC00614P0C842 121 aa13.25□□□□□ -0.29
SNX17-210ENST00000537606 AMN1Q8IY45 258 aa13.25□□□□□ -0.29
SNX17-210ENST00000537606 ZNF580Q9UK33 172 aa13.25□□□□□ -0.29
SNX17-210ENST00000537606 TIMM8BQ9Y5J9 83 aaPredicted RBP13.25□□□□□ -0.29
SNX17-210ENST00000537606 FABP5P3A8MUU1 101 aa13.25□□□□□ -0.29
SNX17-210ENST00000537606 Q6AWC8 147 aa13.25□□□□□ -0.29
SNX17-210ENST00000537606 FAM106AQ4KMX7 169 aa13.24□□□□□ -0.29
SNX17-210ENST00000537606 C20orf144Q9BQM9 153 aa13.24□□□□□ -0.29
SNX17-210ENST00000537606 F6UB75 175 aa13.24□□□□□ -0.29
SNX17-210ENST00000537606 HIST2H2BDQ6DRA6 164 aa13.24□□□□□ -0.29
SNX17-210ENST00000537606 MSRB1Q9NZV6 116 aa13.24□□□□□ -0.29
SNX17-210ENST00000537606 SMPXQ9UHP9 88 aa13.24□□□□□ -0.29
SNX17-210ENST00000537606 SOCS3O14543 225 aa13.23□□□□□ -0.29
SNX17-210ENST00000537606 SPATA45Q537H7 98 aa13.23□□□□□ -0.29
SNX17-210ENST00000537606 WFDC3Q8IUB2 231 aa13.23□□□□□ -0.29
SNX17-210ENST00000537606 FER1L6-AS1Q8NA97 138 aa13.23□□□□□ -0.29
SNX17-210ENST00000537606 MRPL53Q96EL3 112 aaKnown RBP13.23□□□□□ -0.29
SNX17-210ENST00000537606 SNHG12Q9BXW3 62 aa13.23□□□□□ -0.29
SNX17-210ENST00000537606 C11orf21Q9P2W6 132 aa13.23□□□□□ -0.29
SNX17-210ENST00000537606 TWIST1Q15672 202 aa13.23□□□□□ -0.29
SNX17-210ENST00000537606 C9orf47Q6ZRZ4 202 aa13.23□□□□□ -0.29
SNX17-210ENST00000537606 GATD1Q8NB37 220 aa13.23□□□□□ -0.29
SNX17-210ENST00000537606 UNC79Q9P2D8 2635 aa13.23□□□□□ -0.29
SNX17-210ENST00000537606 GCN1Q92616 2671 aaKnown RBP13.23□□□□□ -0.29
SNX17-210ENST00000537606 D6R8Y8 96 aa13.22□□□□□ -0.29
SNX17-210ENST00000537606 BTF3P20290 206 aaKnown RBP13.22□□□□□ -0.29
SNX17-210ENST00000537606 FOXE3Q13461 319 aa13.22□□□□□ -0.29
SNX17-210ENST00000537606 CHCHD1Q96BP2 118 aaKnown RBP13.22□□□□□ -0.29
SNX17-210ENST00000537606 CTRLP40313 264 aa13.22□□□□□ -0.29
SNX17-210ENST00000537606 LOC389332A0A1B0GUA5 103 aa13.21□□□□□ -0.29
SNX17-210ENST00000537606 A0A1B0GW15 77 aa13.21□□□□□ -0.29
SNX17-210ENST00000537606 SMKR1H3BMG3 65 aa13.21□□□□□ -0.29
SNX17-210ENST00000537606 IGLC6P0CF74 106 aa13.21□□□□□ -0.29
SNX17-210ENST00000537606 ZNF493Q6ZR52 646 aa13.21□□□□□ -0.29
SNX17-210ENST00000537606 MIEN1Q9BRT3 115 aa13.21□□□□□ -0.29
SNX17-210ENST00000537606 MCRIP2Q9BUT9 160 aaKnown RBP13.21□□□□□ -0.29
SNX17-210ENST00000537606 IGKV3D-20A0A0C4DH25 116 aa13.21□□□□□ -0.3
SNX17-210ENST00000537606 PRR9Q5T870 116 aa13.21□□□□□ -0.3
SNX17-210ENST00000537606 FAM104BQ5XKR9 115 aa13.21□□□□□ -0.3
SNX17-210ENST00000537606 C18orf65Q6ZTR6 163 aa13.21□□□□□ -0.3
SNX17-210ENST00000537606 IGHV4OR15-8A0A075B7B6 117 aa13.2□□□□□ -0.3
SNX17-210ENST00000537606 A0A087WW49 117 aa13.2□□□□□ -0.3
SNX17-210ENST00000537606 LEPROTL1O95214 131 aa13.2□□□□□ -0.3
SNX17-210ENST00000537606 TFPI2P48307 235 aa13.2□□□□□ -0.3
SNX17-210ENST00000537606 SYNJ2BPP57105 145 aa13.2□□□□□ -0.3
SNX17-210ENST00000537606 AKAP9Q99996 3911 aa13.2□□□□□ -0.3
SNX17-210ENST00000537606 MRPL51Q4U2R6 128 aaKnown RBP13.2□□□□□ -0.3
SNX17-210ENST00000537606 NCR2O95944 276 aa13.19□□□□□ -0.3
SNX17-210ENST00000537606 IFI27P40305 119 aaPredicted RBP13.19□□□□□ -0.3
SNX17-210ENST00000537606 HIST1H1AQ02539 215 aaPredicted RBP13.19□□□□□ -0.3
SNX17-210ENST00000537606 DEFB136Q30KP8 78 aa13.19□□□□□ -0.3
SNX17-210ENST00000537606 SORL1Q92673 2214 aa13.19□□□□□ -0.3
SNX17-210ENST00000537606 HECTD1Q9ULT8 2610 aa13.19□□□□□ -0.3
SNX17-210ENST00000537606 MTORP42345 2549 aa13.19□□□□□ -0.3
SNX17-210ENST00000537606 FASNP49327 2511 aaKnown RBP13.19□□□□□ -0.3
SNX17-210ENST00000537606 TMEM89A2RUT3 159 aa13.19□□□□□ -0.3
SNX17-210ENST00000537606 H0Y8G0 127 aa13.19□□□□□ -0.3
SNX17-210ENST00000537606 K7EMT4 169 aa13.19□□□□□ -0.3
SNX17-210ENST00000537606 ELANEP08246 267 aa13.19□□□□□ -0.3
SNX17-210ENST00000537606 RPS20P60866 119 aaKnown RBP13.19□□□□□ -0.3
SNX17-210ENST00000537606 C2orf88Q9BSF0 95 aa13.19□□□□□ -0.3
SNX17-210ENST00000537606 TMEM70Q9BUB7 260 aa13.19□□□□□ -0.3
SNX17-210ENST00000537606 LINC01559Q495D7 138 aa13.18□□□□□ -0.3
SNX17-210ENST00000537606 OR10J6PQ8NGY7 276 aa13.18□□□□□ -0.3
SNX17-210ENST00000537606 PRSS3P2Q8NHM4 247 aa13.18□□□□□ -0.3
SNX17-210ENST00000537606 UFC1Q9Y3C8 167 aa13.18□□□□□ -0.3
SNX17-210ENST00000537606 GAS8-AS1O95177 125 aa13.18□□□□□ -0.3
SNX17-210ENST00000537606 LGALS1P09382 135 aaKnown RBP13.18□□□□□ -0.3
SNX17-210ENST00000537606 FXYD7P58549 80 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms