RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 EGR2P11161 476 aaPredicted RBP12.15□□□□□ -0.46
CHFR-213ENST00000536843 AGRNO00468 2067 aa12.15□□□□□ -0.46
CHFR-213ENST00000536843 PIEZO2Q9H5I5 2752 aa12.15□□□□□ -0.47
CHFR-213ENST00000536843 MYMXA0A1B0GTQ4 84 aa12.15□□□□□ -0.47
CHFR-213ENST00000536843 SPTBN4Q9H254 2564 aa12.14□□□□□ -0.47
CHFR-213ENST00000536843 PRB4P10163 310 aaPredicted RBP12.14□□□□□ -0.47
CHFR-213ENST00000536843 PDE6HQ13956 83 aa12.14□□□□□ -0.47
CHFR-213ENST00000536843 LINC00311Q8N616 119 aa12.14□□□□□ -0.47
CHFR-213ENST00000536843 IGKV1-17P01599 117 aa12.13□□□□□ -0.47
CHFR-213ENST00000536843 UBE2D3P61077 147 aa12.13□□□□□ -0.47
CHFR-213ENST00000536843 UBE2D2P62837 147 aa12.13□□□□□ -0.47
CHFR-213ENST00000536843 SRSF2Q01130 221 aaKnown RBP12.13□□□□□ -0.47
CHFR-213ENST00000536843 TEX29Q8N6K0 151 aa12.13□□□□□ -0.47
CHFR-213ENST00000536843 C8orf31Q8N9H6 132 aa12.13□□□□□ -0.47
CHFR-213ENST00000536843 MYOZ3Q8TDC0 251 aa12.13□□□□□ -0.47
CHFR-213ENST00000536843 CITED1Q99966 193 aa12.13□□□□□ -0.47
CHFR-213ENST00000536843 FAM110AQ9BQ89 295 aa12.13□□□□□ -0.47
CHFR-213ENST00000536843 ZNF575Q86XF7 245 aa12.13□□□□□ -0.47
CHFR-213ENST00000536843 SBSPONQ8IVN8 264 aa12.13□□□□□ -0.47
CHFR-213ENST00000536843 MSRB1Q9NZV6 116 aa12.13□□□□□ -0.47
CHFR-213ENST00000536843 RAXQ9Y2V3 346 aa12.13□□□□□ -0.47
CHFR-213ENST00000536843 UFC1Q9Y3C8 167 aa12.13□□□□□ -0.47
CHFR-213ENST00000536843 PIEZO1Q92508 2521 aa12.13□□□□□ -0.47
CHFR-213ENST00000536843 B5MCH6 92 aa12.12□□□□□ -0.47
CHFR-213ENST00000536843 I3L2K1 104 aa12.12□□□□□ -0.47
CHFR-213ENST00000536843 ZNF688P0C7X2 276 aa12.12□□□□□ -0.47
CHFR-213ENST00000536843 NHLRC4P0CG21 123 aaPredicted RBP12.12□□□□□ -0.47
CHFR-213ENST00000536843 PSMB2P49721 201 aa12.12□□□□□ -0.47
CHFR-213ENST00000536843 PSMG3-AS1Q96PY0 264 aa12.12□□□□□ -0.47
CHFR-213ENST00000536843 AAMDCQ9H7C9 122 aa12.12□□□□□ -0.47
CHFR-213ENST00000536843 E7EQL1 145 aa12.12□□□□□ -0.47
CHFR-213ENST00000536843 TMEM262E9PQX1 116 aa12.12□□□□□ -0.47
CHFR-213ENST00000536843 NDUFB3O43676 98 aa12.12□□□□□ -0.47
CHFR-213ENST00000536843 APELAP0DMC3 54 aa12.12□□□□□ -0.47
CHFR-213ENST00000536843 SRD5A1P18405 259 aa12.12□□□□□ -0.47
CHFR-213ENST00000536843 UBE2D1P51668 147 aa12.12□□□□□ -0.47
CHFR-213ENST00000536843 LYRM7Q5U5X0 104 aa12.12□□□□□ -0.47
CHFR-213ENST00000536843 RNASE6Q93091 150 aaKnown RBP12.12□□□□□ -0.47
CHFR-213ENST00000536843 PTH2Q96A98 100 aa12.12□□□□□ -0.47
CHFR-213ENST00000536843 PRR25Q96S07 402 aa12.12□□□□□ -0.47
CHFR-213ENST00000536843 CTSZQ9UBR2 303 aa12.12□□□□□ -0.47
CHFR-213ENST00000536843 ARFGEF3Q5TH69 2177 aa12.11□□□□□ -0.47
CHFR-213ENST00000536843 TRBV7-9A0A0J9YWB2 115 aa12.11□□□□□ -0.47
CHFR-213ENST00000536843 LINC01549A6NIU2 74 aa12.11□□□□□ -0.47
CHFR-213ENST00000536843 SHISA2Q6UWI4 295 aa12.11□□□□□ -0.47
CHFR-213ENST00000536843 DYNLRB1Q9NP97 96 aa12.11□□□□□ -0.47
CHFR-213ENST00000536843 PKDREJQ9NTG1 2253 aa12.11□□□□□ -0.47
CHFR-213ENST00000536843 TRAV12-1A0A0B4J245 112 aa12.1□□□□□ -0.47
CHFR-213ENST00000536843 TEX22C9J3V5 150 aa12.1□□□□□ -0.47
CHFR-213ENST00000536843 NDUFA3O95167 84 aa12.1□□□□□ -0.47
CHFR-213ENST00000536843 CRYGBP07316 175 aa12.1□□□□□ -0.47
CHFR-213ENST00000536843 LGALS1P09382 135 aaKnown RBP12.1□□□□□ -0.47
CHFR-213ENST00000536843 GATA1P15976 413 aaPredicted RBP12.1□□□□□ -0.47
CHFR-213ENST00000536843 LAGE3Q14657 143 aa12.1□□□□□ -0.47
CHFR-213ENST00000536843 F8VRH5 84 aa12.09□□□□□ -0.47
CHFR-213ENST00000536843 LOXP28300 417 aaPredicted RBP12.09□□□□□ -0.47
CHFR-213ENST00000536843 ZNF80P51504 273 aaPredicted RBP12.09□□□□□ -0.47
CHFR-213ENST00000536843 ZFP2Q6ZN57 461 aa12.09□□□□□ -0.47
CHFR-213ENST00000536843 ZNF491Q8N8L2 437 aa12.09□□□□□ -0.47
CHFR-213ENST00000536843 LOC107984156A0A0G2JMH3 177 aa12.09□□□□□ -0.47
CHFR-213ENST00000536843 FAM90A27PA6NNH2 459 aa12.09□□□□□ -0.47
CHFR-213ENST00000536843 H7C1H1 209 aa12.09□□□□□ -0.47
CHFR-213ENST00000536843 RHODO00212 210 aa12.09□□□□□ -0.47
CHFR-213ENST00000536843 ARL17AQ8IVW1 177 aa12.09□□□□□ -0.47
CHFR-213ENST00000536843 RNF125Q96EQ8 232 aa12.09□□□□□ -0.47
CHFR-213ENST00000536843 IGKV2-40A0A087WW87 121 aaPredicted RBP12.08□□□□□ -0.48
CHFR-213ENST00000536843 IGKV2D-40P01614 121 aaPredicted RBP12.08□□□□□ -0.48
CHFR-213ENST00000536843 DLX6P56179 175 aa12.08□□□□□ -0.48
CHFR-213ENST00000536843 DTX2Q86UW9 622 aa12.08□□□□□ -0.48
CHFR-213ENST00000536843 TRBV20-1A0A075B6N2 111 aa12.08□□□□□ -0.48
CHFR-213ENST00000536843 LINC01548A6NM66 108 aa12.08□□□□□ -0.48
CHFR-213ENST00000536843 A8MWV9 139 aa12.08□□□□□ -0.48
CHFR-213ENST00000536843 ENSAO43768 121 aaKnown RBP12.08□□□□□ -0.48
CHFR-213ENST00000536843 SIGLEC9Q9Y336 463 aa12.08□□□□□ -0.48
CHFR-213ENST00000536843 TMEM78Q5T7P6 136 aa12.07□□□□□ -0.48
CHFR-213ENST00000536843 OR11H6Q8NGC7 330 aa12.07□□□□□ -0.48
CHFR-213ENST00000536843 PLXNB1O43157 2135 aa12.07□□□□□ -0.48
CHFR-213ENST00000536843 PTPRQQ9UMZ3 2332 aa12.07□□□□□ -0.48
CHFR-213ENST00000536843 ADGRG4Q8IZF6 3080 aa12.06□□□□□ -0.48
CHFR-213ENST00000536843 CD7P09564 240 aa12.06□□□□□ -0.48
CHFR-213ENST00000536843 HERV-K104P63124 156 aa12.06□□□□□ -0.48
CHFR-213ENST00000536843 TMEM155Q4W5P6 130 aa12.06□□□□□ -0.48
CHFR-213ENST00000536843 IGHV3-72A0A0B4J1Y9 119 aa12.06□□□□□ -0.48
CHFR-213ENST00000536843 CNTFRP26992 372 aa12.06□□□□□ -0.48
CHFR-213ENST00000536843 NRACQ8N912 160 aa12.06□□□□□ -0.48
CHFR-213ENST00000536843 FBXL15Q9H469 300 aa12.06□□□□□ -0.48
CHFR-213ENST00000536843 KAAG1Q9UBP8 84 aa12.06□□□□□ -0.48
CHFR-213ENST00000536843 GAGE12JA6NER3 117 aa12.05□□□□□ -0.48
CHFR-213ENST00000536843 K7EIM0 57 aa12.05□□□□□ -0.48
CHFR-213ENST00000536843 GAGE7O76087 117 aa12.05□□□□□ -0.48
CHFR-213ENST00000536843 TCL1BO95988 128 aa12.05□□□□□ -0.48
CHFR-213ENST00000536843 GAGE12FP0CL80 117 aa12.05□□□□□ -0.48
CHFR-213ENST00000536843 GAGE12GP0CL81 117 aa12.05□□□□□ -0.48
CHFR-213ENST00000536843 GAGE12IP0CL82 117 aa12.05□□□□□ -0.48
CHFR-213ENST00000536843 ASIPP42127 132 aa12.05□□□□□ -0.48
CHFR-213ENST00000536843 NDUFV3P56181 108 aaKnown RBP12.05□□□□□ -0.48
CHFR-213ENST00000536843 GAGE4Q13068 117 aa12.05□□□□□ -0.48
CHFR-213ENST00000536843 ANKRD29Q8N6D5 301 aa12.05□□□□□ -0.48
CHFR-213ENST00000536843 IGF2RP11717 2491 aa12.05□□□□□ -0.48
CHFR-213ENST00000536843 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms