RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 OR4C13Q8NGP0 309 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 ST8SIA1Q92185 356 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 FXYD5Q96DB9 178 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 C8orf49Q96NF6 230 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 VKORC1Q9BQB6 163 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 MLST8Q9BVC4 326 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 LINC00527Q9UJ94 153 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 TRAV26-2A0A0B4J265 109 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 A0A0U1RQV1 116 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 SRRM4A7MD48 611 aaKnown RBP2.91□□□□□ -1.94
MCF2-210ENST00000536274 COX7A2P2O60397 106 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 TCRAP04437 139 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 LGALS1P09382 135 aaKnown RBP2.91□□□□□ -1.94
MCF2-210ENST00000536274 CKS2P33552 79 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 ASIPP42127 132 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 CRIP1P50238 77 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 PAX8Q06710 450 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 Q6ZSR3 168 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 LINC00305Q7Z4B0 112 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 DEFB119Q8N690 84 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 TRGV9Q99603 122 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 RTL8AQ9BWD3 113 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 KRTAP4-8Q9BYQ9 185 aa2.91□□□□□ -1.94
MCF2-210ENST00000536274 MED13Q9UHV7 2174 aa2.9□□□□□ -1.94
MCF2-210ENST00000536274 ATRXP46100 2492 aa2.9□□□□□ -1.94
MCF2-210ENST00000536274 J3KT08 172 aa2.9□□□□□ -1.94
MCF2-210ENST00000536274 DUSP14O95147 198 aaKnown RBP2.9□□□□□ -1.94
MCF2-210ENST00000536274 CECR9P0C854 216 aa2.9□□□□□ -1.94
MCF2-210ENST00000536274 CNTFRP26992 372 aa2.9□□□□□ -1.94
MCF2-210ENST00000536274 DUTP33316 252 aaKnown RBP2.9□□□□□ -1.94
MCF2-210ENST00000536274 ERCC8Q13216 396 aa2.9□□□□□ -1.94
MCF2-210ENST00000536274 FAM27BQ5VT28 67 aa2.9□□□□□ -1.94
MCF2-210ENST00000536274 SCGB1D4Q6XE38 83 aa2.9□□□□□ -1.94
MCF2-210ENST00000536274 Q6ZSV7 163 aa2.9□□□□□ -1.94
MCF2-210ENST00000536274 IL17RELQ6ZVW7 336 aa2.9□□□□□ -1.94
MCF2-210ENST00000536274 C11orf53Q8IXP5 236 aa2.9□□□□□ -1.94
MCF2-210ENST00000536274 OR10J6PQ8NGY7 276 aa2.9□□□□□ -1.94
MCF2-210ENST00000536274 C10orf105Q8TEF2 133 aa2.9□□□□□ -1.94
MCF2-210ENST00000536274 TMEM126AQ9H061 195 aa2.9□□□□□ -1.94
MCF2-210ENST00000536274 SLC25A10Q9UBX3 287 aaPredicted RBP2.9□□□□□ -1.94
MCF2-210ENST00000536274 MYO18BQ8IUG5 2567 aa2.9□□□□□ -1.94
MCF2-210ENST00000536274 NPIPB13A6NJU9 1138 aa2.9□□□□□ -1.95
MCF2-210ENST00000536274 NPIPB4C9JG80 1138 aa2.9□□□□□ -1.95
MCF2-210ENST00000536274 DPM2O94777 84 aa2.9□□□□□ -1.95
MCF2-210ENST00000536274 PRB1P04280 392 aa2.9□□□□□ -1.95
MCF2-210ENST00000536274 UBE2D3P61077 147 aa2.9□□□□□ -1.95
MCF2-210ENST00000536274 UBE2D2P62837 147 aa2.9□□□□□ -1.95
MCF2-210ENST00000536274 C10orf55Q5SWW7 151 aa2.9□□□□□ -1.95
MCF2-210ENST00000536274 C10orf113Q5VZT2 155 aa2.9□□□□□ -1.95
MCF2-210ENST00000536274 GUSBP11Q6P575 273 aa2.9□□□□□ -1.95
MCF2-210ENST00000536274 PDPNQ86YL7 162 aa2.9□□□□□ -1.95
MCF2-210ENST00000536274 CITED2Q99967 270 aaPredicted RBP2.9□□□□□ -1.95
MCF2-210ENST00000536274 ZNF492Q9P255 531 aa2.9□□□□□ -1.95
MCF2-210ENST00000536274 SIGLEC9Q9Y336 463 aa2.9□□□□□ -1.95
MCF2-210ENST00000536274 IGKV3D-11A0A0A0MRZ8 115 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 FAM90A5PA8MXJ8 464 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 SLC25A16P16260 332 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 TWIST1Q15672 202 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 C10orf128Q5T292 105 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 Q5XG85 94 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 FAM19A4Q96LR4 140 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 C2orf48Q96LS8 159 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 FOXB1Q99853 325 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 ZNF815PA8K554 130 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 H7C1H1 209 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 M0R3E3 92 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 TIMM23O14925 209 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 CFC1BP0CG36 223 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 CFC1P0CG37 223 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 KIR2DS2P43631 304 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 HERVK_113P61574 105 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 IGFL4Q6B9Z1 124 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 NDUFA11Q86Y39 141 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 ORMDL3Q8N138 153 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 C14orf178Q8N769 122 aaPredicted RBP2.89□□□□□ -1.95
MCF2-210ENST00000536274 Q9H3A6 140 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 TPRP12270 2363 aaKnown RBP2.89□□□□□ -1.95
MCF2-210ENST00000536274 FAM90A10PA6NDY2 464 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 SPINT2O43291 252 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 IFI6P09912 130 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 FAM90A24PP0C7X0 464 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 RIGQ13278 110 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 FAM104BQ5XKR9 115 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 IGFL2Q6UWQ7 119 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 LINC00336Q6ZUF6 198 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 RNF125Q96EQ8 232 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 DEFB126Q9BYW3 111 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 GNG12Q9UBI6 72 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 PTPRQQ9UMZ3 2332 aa2.89□□□□□ -1.95
MCF2-210ENST00000536274 GCN1Q92616 2671 aaKnown RBP2.89□□□□□ -1.95
MCF2-210ENST00000536274 CHD8Q9HCK8 2581 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 ZFHX3Q15911 3703 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 IGHV3-64A0A075B6Q5 118 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 NCBP2LA6PVI3 153 aaKnown RBP2.88□□□□□ -1.95
MCF2-210ENST00000536274 CXCL13O43927 109 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 WISP2O76076 250 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 IGKV1-16P04430 117 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 FKBP2P26885 142 aaKnown RBP2.88□□□□□ -1.95
MCF2-210ENST00000536274 ERVK-16P61578 105 aa2.88□□□□□ -1.95
MCF2-210ENST00000536274 NPC2P61916 151 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms