RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 GAS8-AS1O95177 125 aa12.28□□□□□ -0.44
CHMP1A-202ENST00000535997 LEPP41159 167 aa12.28□□□□□ -0.44
CHMP1A-202ENST00000535997 SMIM15Q7Z3B0 74 aa12.28□□□□□ -0.44
CHMP1A-202ENST00000535997 TMEM219Q86XT9 240 aa12.28□□□□□ -0.44
CHMP1A-202ENST00000535997 OR4C5Q8NGB2 326 aa12.28□□□□□ -0.44
CHMP1A-202ENST00000535997 OR9G4Q8NGQ1 327 aa12.27□□□□□ -0.44
CHMP1A-202ENST00000535997 PIFOQ8TCI5 191 aa12.27□□□□□ -0.44
CHMP1A-202ENST00000535997 LENEPQ9Y5L5 61 aa12.27□□□□□ -0.44
CHMP1A-202ENST00000535997 IGHV4-4A0A075B6R2 117 aa12.27□□□□□ -0.45
CHMP1A-202ENST00000535997 FOXE3Q13461 319 aa12.27□□□□□ -0.45
CHMP1A-202ENST00000535997 C16orf92Q96LL3 132 aa12.27□□□□□ -0.45
CHMP1A-202ENST00000535997 NCOR2Q9Y618 2525 aa12.27□□□□□ -0.45
CHMP1A-202ENST00000535997 IGHV1-69DA0A0B4J2H0 117 aa12.26□□□□□ -0.45
CHMP1A-202ENST00000535997 IGHV7-4-1A0A0J9YVY3 117 aa12.26□□□□□ -0.45
CHMP1A-202ENST00000535997 PRSS47A8MTI9 375 aa12.26□□□□□ -0.45
CHMP1A-202ENST00000535997 SMAD7O15105 426 aaKnown RBP12.26□□□□□ -0.45
CHMP1A-202ENST00000535997 IGHV1-69P01742 117 aa12.26□□□□□ -0.45
CHMP1A-202ENST00000535997 TRGV3P03979 118 aa12.26□□□□□ -0.45
CHMP1A-202ENST00000535997 EVI2AP22794 236 aa12.26□□□□□ -0.45
CHMP1A-202ENST00000535997 Q8N8P6 123 aa12.26□□□□□ -0.45
CHMP1A-202ENST00000535997 MEGF9Q9H1U4 602 aa12.26□□□□□ -0.45
CHMP1A-202ENST00000535997 C19orf84I3L1E1 186 aa12.26□□□□□ -0.45
CHMP1A-202ENST00000535997 IGHV4-39P01824 125 aa12.26□□□□□ -0.45
CHMP1A-202ENST00000535997 C9orf139Q6ZV77 190 aa12.26□□□□□ -0.45
CHMP1A-202ENST00000535997 GLMPQ8WWB7 406 aa12.26□□□□□ -0.45
CHMP1A-202ENST00000535997 DKK2Q9UBU2 259 aa12.26□□□□□ -0.45
CHMP1A-202ENST00000535997 OR2K2Q8NGT1 345 aa12.25□□□□□ -0.45
CHMP1A-202ENST00000535997 C18orf15Q96N68 181 aa12.25□□□□□ -0.45
CHMP1A-202ENST00000535997 ZMAT4Q9H898 229 aa12.25□□□□□ -0.45
CHMP1A-202ENST00000535997 CHD8Q9HCK8 2581 aa12.25□□□□□ -0.45
CHMP1A-202ENST00000535997 IGLV2-18A0A075B6J9 118 aa12.25□□□□□ -0.45
CHMP1A-202ENST00000535997 A1L4Q6 167 aa12.25□□□□□ -0.45
CHMP1A-202ENST00000535997 CBY3A6NI87 242 aa12.25□□□□□ -0.45
CHMP1A-202ENST00000535997 IGF1P05019 195 aa12.25□□□□□ -0.45
CHMP1A-202ENST00000535997 GATA1P15976 413 aaPredicted RBP12.25□□□□□ -0.45
CHMP1A-202ENST00000535997 ARL3P36405 182 aa12.25□□□□□ -0.45
CHMP1A-202ENST00000535997 PEF1Q9UBV8 284 aaKnown RBP12.25□□□□□ -0.45
CHMP1A-202ENST00000535997 BRI3O95415 125 aa12.24□□□□□ -0.45
CHMP1A-202ENST00000535997 WFDC3Q8IUB2 231 aa12.24□□□□□ -0.45
CHMP1A-202ENST00000535997 LINC00477Q96M19 166 aa12.24□□□□□ -0.45
CHMP1A-202ENST00000535997 LINC00527Q9UJ94 153 aa12.24□□□□□ -0.45
CHMP1A-202ENST00000535997 C7orf71A4D174 169 aa12.23□□□□□ -0.45
CHMP1A-202ENST00000535997 NDUFA4O00483 81 aa12.23□□□□□ -0.45
CHMP1A-202ENST00000535997 AMMECR1LQ6DCA0 310 aa12.23□□□□□ -0.45
CHMP1A-202ENST00000535997 OR4X2Q8NGF9 303 aa12.23□□□□□ -0.45
CHMP1A-202ENST00000535997 PRORYQ9H606 182 aa12.23□□□□□ -0.45
CHMP1A-202ENST00000535997 SMPXQ9UHP9 88 aa12.23□□□□□ -0.45
CHMP1A-202ENST00000535997 ZFHX3Q15911 3703 aa12.23□□□□□ -0.45
CHMP1A-202ENST00000535997 IGHV3OR16-10A0A075B7F0 116 aa12.23□□□□□ -0.45
CHMP1A-202ENST00000535997 PRSS1P07477 247 aa12.23□□□□□ -0.45
CHMP1A-202ENST00000535997 ODF1Q14990 250 aa12.23□□□□□ -0.45
CHMP1A-202ENST00000535997 SPANXN1Q5VSR9 72 aa12.23□□□□□ -0.45
CHMP1A-202ENST00000535997 HHLA3Q9XRX5 114 aa12.23□□□□□ -0.45
CHMP1A-202ENST00000535997 A6NDN8 102 aa12.22□□□□□ -0.45
CHMP1A-202ENST00000535997 UQCRFS1P47985 274 aa12.22□□□□□ -0.45
CHMP1A-202ENST00000535997 ERASQ7Z444 233 aa12.22□□□□□ -0.45
CHMP1A-202ENST00000535997 TMEM158Q8WZ71 300 aa12.22□□□□□ -0.45
CHMP1A-202ENST00000535997 USMG5Q96IX5 58 aa12.22□□□□□ -0.45
CHMP1A-202ENST00000535997 HSD52Q0P140 79 aa12.22□□□□□ -0.45
CHMP1A-202ENST00000535997 BRD3OSQ6XYD6 125 aa12.22□□□□□ -0.45
CHMP1A-202ENST00000535997 ADAMTSL5Q6ZMM2 481 aa12.22□□□□□ -0.45
CHMP1A-202ENST00000535997 NRACQ8N912 160 aa12.22□□□□□ -0.45
CHMP1A-202ENST00000535997 H3BUA1 57 aa12.21□□□□□ -0.45
CHMP1A-202ENST00000535997 ATP5LO75964 103 aa12.21□□□□□ -0.45
CHMP1A-202ENST00000535997 NMUP48645 174 aa12.21□□□□□ -0.45
CHMP1A-202ENST00000535997 UNQ9165/PRO28630Q6UXU0 137 aa12.21□□□□□ -0.45
CHMP1A-202ENST00000535997 RNASE8Q8TDE3 154 aaKnown RBP12.21□□□□□ -0.45
CHMP1A-202ENST00000535997 TRAV40A0A0B4J280 105 aa12.21□□□□□ -0.46
CHMP1A-202ENST00000535997 OVOL1O14753 267 aa12.21□□□□□ -0.46
CHMP1A-202ENST00000535997 SMIM17P0DL12 118 aa12.21□□□□□ -0.46
CHMP1A-202ENST00000535997 GNLYP22749 145 aa12.21□□□□□ -0.46
CHMP1A-202ENST00000535997 LAGE3Q14657 143 aa12.21□□□□□ -0.46
CHMP1A-202ENST00000535997 Q6ZQT7 251 aa12.21□□□□□ -0.46
CHMP1A-202ENST00000535997 PCP2Q8IVA1 136 aa12.21□□□□□ -0.46
CHMP1A-202ENST00000535997 C20orf173Q96LM9 149 aa12.21□□□□□ -0.46
CHMP1A-202ENST00000535997 PIMREGQ9BSJ6 248 aa12.21□□□□□ -0.46
CHMP1A-202ENST00000535997 SPTAN1Q13813 2472 aaKnown RBP12.2□□□□□ -0.46
CHMP1A-202ENST00000535997 IGHG2P01859 326 aa12.2□□□□□ -0.46
CHMP1A-202ENST00000535997 SRSF1Q07955 248 aaKnown RBP eCLIP12.2□□□□□ -0.46
CHMP1A-202ENST00000535997 GPHB5Q86YW7 130 aa12.2□□□□□ -0.46
CHMP1A-202ENST00000535997 OR10J6PQ8NGY7 276 aa12.2□□□□□ -0.46
CHMP1A-202ENST00000535997 UFC1Q9Y3C8 167 aa12.2□□□□□ -0.46
CHMP1A-202ENST00000535997 ABCA2Q9BZC7 2435 aa12.2□□□□□ -0.46
CHMP1A-202ENST00000535997 TRAV8-6A0A0B4J262 113 aa12.2□□□□□ -0.46
CHMP1A-202ENST00000535997 IGHV4-61A0A0C4DH41 118 aa12.2□□□□□ -0.46
CHMP1A-202ENST00000535997 H3BRM9 83 aa12.2□□□□□ -0.46
CHMP1A-202ENST00000535997 IGKCP01834 107 aa12.2□□□□□ -0.46
CHMP1A-202ENST00000535997 MYOZ3Q8TDC0 251 aa12.2□□□□□ -0.46
CHMP1A-202ENST00000535997 MRAP2Q96G30 205 aa12.2□□□□□ -0.46
CHMP1A-202ENST00000535997 ITPR1Q14643 2758 aa12.19□□□□□ -0.46
CHMP1A-202ENST00000535997 SOCS3O14543 225 aa12.19□□□□□ -0.46
CHMP1A-202ENST00000535997 TRBV12-3P01733 135 aa12.19□□□□□ -0.46
CHMP1A-202ENST00000535997 TCTAP57738 103 aa12.19□□□□□ -0.46
CHMP1A-202ENST00000535997 PRR9Q5T870 116 aa12.19□□□□□ -0.46
CHMP1A-202ENST00000535997 VPS13CQ709C8 3753 aa12.18□□□□□ -0.46
CHMP1A-202ENST00000535997 TRAV21A0A0B4J279 112 aa12.18□□□□□ -0.46
CHMP1A-202ENST00000535997 NDUFS8O00217 210 aa12.18□□□□□ -0.46
CHMP1A-202ENST00000535997 ZFAND2AQ8N6M9 145 aa12.18□□□□□ -0.46
CHMP1A-202ENST00000535997 H3BVH4 76 aa12.18□□□□□ -0.46
CHMP1A-202ENST00000535997 DPM2O94777 84 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms