RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 HSBP1L1C9JCN9 74 aa10.23□□□□□ -0.77
VPS33B-202ENST00000535906 BRI3O95415 125 aa10.23□□□□□ -0.77
VPS33B-202ENST00000535906 NPSP0C0P6 89 aa10.23□□□□□ -0.77
VPS33B-202ENST00000535906 PF4V1P10720 104 aa10.23□□□□□ -0.77
VPS33B-202ENST00000535906 HINT1P49773 126 aaPredicted RBP10.23□□□□□ -0.77
VPS33B-202ENST00000535906 MUC21Q5SSG8 566 aa10.23□□□□□ -0.77
VPS33B-202ENST00000535906 LINC01545Q5VT33 79 aa10.23□□□□□ -0.77
VPS33B-202ENST00000535906 AMN1Q8IY45 258 aa10.23□□□□□ -0.77
VPS33B-202ENST00000535906 LINC01356Q8N9X3 169 aa10.23□□□□□ -0.77
VPS33B-202ENST00000535906 PTPN13Q12923 2485 aa10.23□□□□□ -0.77
VPS33B-202ENST00000535906 RBAKDNA6NC62 111 aa10.23□□□□□ -0.77
VPS33B-202ENST00000535906 H3BUA1 57 aa10.23□□□□□ -0.77
VPS33B-202ENST00000535906 SMAD7O15105 426 aaKnown RBP10.23□□□□□ -0.77
VPS33B-202ENST00000535906 IFI27P40305 119 aaPredicted RBP10.23□□□□□ -0.77
VPS33B-202ENST00000535906 IL17RELQ6ZVW7 336 aa10.23□□□□□ -0.77
VPS33B-202ENST00000535906 ORMDL3Q8N138 153 aa10.23□□□□□ -0.77
VPS33B-202ENST00000535906 GLMPQ8WWB7 406 aa10.23□□□□□ -0.77
VPS33B-202ENST00000535906 USMG5Q96IX5 58 aa10.23□□□□□ -0.77
VPS33B-202ENST00000535906 ZNF747Q9BV97 191 aa10.23□□□□□ -0.77
VPS33B-202ENST00000535906 AGPAT4-IT1Q9H0P7 198 aa10.23□□□□□ -0.77
VPS33B-202ENST00000535906 IGLC6P0CF74 106 aa10.22□□□□□ -0.77
VPS33B-202ENST00000535906 FER1L6-AS1Q8NA97 138 aa10.22□□□□□ -0.77
VPS33B-202ENST00000535906 PRELID3AQ96N28 172 aa10.22□□□□□ -0.77
VPS33B-202ENST00000535906 NDUFA4O00483 81 aa10.22□□□□□ -0.77
VPS33B-202ENST00000535906 IGLV1-40P01703 118 aa10.22□□□□□ -0.77
VPS33B-202ENST00000535906 DEFB112Q30KQ8 113 aa10.22□□□□□ -0.77
VPS33B-202ENST00000535906 MRPL51Q4U2R6 128 aaKnown RBP10.22□□□□□ -0.77
VPS33B-202ENST00000535906 PSMG3-AS1Q96PY0 264 aa10.22□□□□□ -0.77
VPS33B-202ENST00000535906 SIGLEC8Q9NYZ4 499 aa10.22□□□□□ -0.77
VPS33B-202ENST00000535906 TIMM8BQ9Y5J9 83 aaPredicted RBP10.22□□□□□ -0.77
VPS33B-202ENST00000535906 FABP5P3A8MUU1 101 aa10.21□□□□□ -0.77
VPS33B-202ENST00000535906 TGFAP01135 160 aa10.21□□□□□ -0.77
VPS33B-202ENST00000535906 IGHV4-59P01825 116 aa10.21□□□□□ -0.77
VPS33B-202ENST00000535906 ORM1P02763 201 aa10.21□□□□□ -0.77
VPS33B-202ENST00000535906 KRTAP10-9P60411 292 aa10.21□□□□□ -0.77
VPS33B-202ENST00000535906 TMEM95Q3KNT9 176 aa10.21□□□□□ -0.77
VPS33B-202ENST00000535906 OR4X2Q8NGF9 303 aa10.21□□□□□ -0.77
VPS33B-202ENST00000535906 MS4A6AQ9H2W1 248 aa10.21□□□□□ -0.77
VPS33B-202ENST00000535906 H0Y8G0 127 aa10.21□□□□□ -0.78
VPS33B-202ENST00000535906 TWIST1Q15672 202 aa10.21□□□□□ -0.78
VPS33B-202ENST00000535906 FAM106AQ4KMX7 169 aa10.21□□□□□ -0.78
VPS33B-202ENST00000535906 MCRIP2Q9BUT9 160 aaKnown RBP10.21□□□□□ -0.78
VPS33B-202ENST00000535906 A0A096LNJ9 63 aa10.2□□□□□ -0.78
VPS33B-202ENST00000535906 LOC389332A0A1B0GUA5 103 aa10.2□□□□□ -0.78
VPS33B-202ENST00000535906 CFHR3Q02985 330 aa10.2□□□□□ -0.78
VPS33B-202ENST00000535906 SLC25A34Q6PIV7 304 aa10.2□□□□□ -0.78
VPS33B-202ENST00000535906 MRPL53Q96EL3 112 aaKnown RBP10.2□□□□□ -0.78
VPS33B-202ENST00000535906 C16orf92Q96LL3 132 aa10.2□□□□□ -0.78
VPS33B-202ENST00000535906 SCRT2Q9NQ03 307 aa10.2□□□□□ -0.78
VPS33B-202ENST00000535906 ABCA12Q86UK0 2595 aa10.2□□□□□ -0.78
VPS33B-202ENST00000535906 LOXL1Q08397 574 aaPredicted RBP10.19□□□□□ -0.78
VPS33B-202ENST00000535906 GPHB5Q86YW7 130 aa10.19□□□□□ -0.78
VPS33B-202ENST00000535906 CNFNQ9BYD5 112 aa10.19□□□□□ -0.78
VPS33B-202ENST00000535906 RNF223E7ERA6 249 aa10.19□□□□□ -0.78
VPS33B-202ENST00000535906 TMEM78Q5T7P6 136 aa10.19□□□□□ -0.78
VPS33B-202ENST00000535906 C20orf173Q96LM9 149 aa10.19□□□□□ -0.78
VPS33B-202ENST00000535906 TP73-AS1Q9UF72 201 aa10.19□□□□□ -0.78
VPS33B-202ENST00000535906 MXRA5Q9NR99 2828 aa10.19□□□□□ -0.78
VPS33B-202ENST00000535906 CKS2P33552 79 aa10.18□□□□□ -0.78
VPS33B-202ENST00000535906 LINC01559Q495D7 138 aa10.18□□□□□ -0.78
VPS33B-202ENST00000535906 ORAOV1Q8WV07 137 aa10.18□□□□□ -0.78
VPS33B-202ENST00000535906 PMCHL2Q9BQD1 86 aa10.18□□□□□ -0.78
VPS33B-202ENST00000535906 C9orf47Q6ZRZ4 202 aa10.18□□□□□ -0.78
VPS33B-202ENST00000535906 NPFFR1Q9GZQ6 430 aa10.18□□□□□ -0.78
VPS33B-202ENST00000535906 MSRB1Q9NZV6 116 aa10.18□□□□□ -0.78
VPS33B-202ENST00000535906 C11orf21Q9P2W6 132 aa10.18□□□□□ -0.78
VPS33B-202ENST00000535906 IGKV3D-20A0A0C4DH25 116 aa10.17□□□□□ -0.78
VPS33B-202ENST00000535906 A0A0G2JLM5 398 aa10.17□□□□□ -0.78
VPS33B-202ENST00000535906 NCR2O95944 276 aa10.17□□□□□ -0.78
VPS33B-202ENST00000535906 J3QLI3 93 aa10.17□□□□□ -0.78
VPS33B-202ENST00000535906 FOSL1P15407 271 aa10.17□□□□□ -0.78
VPS33B-202ENST00000535906 C10orf99Q6UWK7 81 aa10.17□□□□□ -0.78
VPS33B-202ENST00000535906 Q6ZQT7 251 aa10.17□□□□□ -0.78
VPS33B-202ENST00000535906 C9orf139Q6ZV77 190 aa10.17□□□□□ -0.78
VPS33B-202ENST00000535906 SMKR1H3BMG3 65 aa10.16□□□□□ -0.78
VPS33B-202ENST00000535906 NPYP01303 97 aa10.16□□□□□ -0.78
VPS33B-202ENST00000535906 TM4SF20Q53R12 229 aa10.16□□□□□ -0.78
VPS33B-202ENST00000535906 COX11Q9Y6N1 276 aa10.16□□□□□ -0.78
VPS33B-202ENST00000535906 NAV2Q8IVL1 2488 aa10.16□□□□□ -0.78
VPS33B-202ENST00000535906 CR1P17927 2039 aa10.16□□□□□ -0.78
VPS33B-202ENST00000535906 SOCS3O14543 225 aa10.16□□□□□ -0.78
VPS33B-202ENST00000535906 HBDP02042 147 aa10.16□□□□□ -0.78
VPS33B-202ENST00000535906 MPV17L2Q567V2 206 aa10.16□□□□□ -0.78
VPS33B-202ENST00000535906 ZNF738Q8NE65 137 aa10.16□□□□□ -0.78
VPS33B-202ENST00000535906 OR8A1Q8NGG7 326 aa10.16□□□□□ -0.78
VPS33B-202ENST00000535906 RNF185Q96GF1 192 aa10.16□□□□□ -0.78
VPS33B-202ENST00000535906 SELENOKQ9Y6D0 94 aa10.16□□□□□ -0.78
VPS33B-202ENST00000535906 PPBPP02775 128 aa10.15□□□□□ -0.78
VPS33B-202ENST00000535906 PSMB8P28062 276 aa10.15□□□□□ -0.78
VPS33B-202ENST00000535906 DEFB1P60022 68 aa10.15□□□□□ -0.78
VPS33B-202ENST00000535906 PPP1R14DQ9NXH3 145 aa10.15□□□□□ -0.78
VPS33B-202ENST00000535906 TEX15Q9BXT5 2789 aa10.15□□□□□ -0.78
VPS33B-202ENST00000535906 TCF21O43680 179 aa10.15□□□□□ -0.79
VPS33B-202ENST00000535906 IGHV4-31P0DP07 118 aa10.15□□□□□ -0.79
VPS33B-202ENST00000535906 EDN2P20800 178 aa10.15□□□□□ -0.79
VPS33B-202ENST00000535906 RPL11P62913 178 aaKnown RBP10.15□□□□□ -0.79
VPS33B-202ENST00000535906 HIST1H1AQ02539 215 aaPredicted RBP10.15□□□□□ -0.79
VPS33B-202ENST00000535906 FOXE3Q13461 319 aa10.15□□□□□ -0.79
VPS33B-202ENST00000535906 LGALS9BQ3B8N2 356 aa10.15□□□□□ -0.79
VPS33B-202ENST00000535906 LGALS9CQ6DKI2 356 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms