RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 TMEM88Q6PEY1 159 aa17■□□□□ 0.31
RBFOX1-206ENST00000535565 LINC00322Q6ZN03 302 aaPredicted RBP17■□□□□ 0.31
RBFOX1-206ENST00000535565 CBLN2Q8IUK8 224 aa17■□□□□ 0.31
RBFOX1-206ENST00000535565 CXorf65A6NEN9 183 aa16.99■□□□□ 0.31
RBFOX1-206ENST00000535565 H3BMM0 161 aa16.99■□□□□ 0.31
RBFOX1-206ENST00000535565 CD7P09564 240 aa16.99■□□□□ 0.31
RBFOX1-206ENST00000535565 BTN1A1Q13410 526 aa16.99■□□□□ 0.31
RBFOX1-206ENST00000535565 ZNF124Q15973 351 aa16.99■□□□□ 0.31
RBFOX1-206ENST00000535565 PRR31Q5SQ13 230 aa16.99■□□□□ 0.31
RBFOX1-206ENST00000535565 GTSCR1Q86UQ5 136 aa16.99■□□□□ 0.31
RBFOX1-206ENST00000535565 AGRNO00468 2067 aa16.99■□□□□ 0.31
RBFOX1-206ENST00000535565 GPX1P07203 203 aa16.98■□□□□ 0.31
RBFOX1-206ENST00000535565 TSPOP30536 169 aa16.98■□□□□ 0.31
RBFOX1-206ENST00000535565 CRIP1P50238 77 aa16.98■□□□□ 0.31
RBFOX1-206ENST00000535565 ZFAND2AQ8N6M9 145 aa16.98■□□□□ 0.31
RBFOX1-206ENST00000535565 MDFIQ99750 246 aa16.98■□□□□ 0.31
RBFOX1-206ENST00000535565 V9GYV3 84 aa16.98■□□□□ 0.31
RBFOX1-206ENST00000535565 FABP5P3A8MUU1 101 aa16.98■□□□□ 0.31
RBFOX1-206ENST00000535565 SH2D1AO60880 128 aa16.98■□□□□ 0.31
RBFOX1-206ENST00000535565 ZNF80P51504 273 aaPredicted RBP16.98■□□□□ 0.31
RBFOX1-206ENST00000535565 STHQ8IWL8 128 aa16.98■□□□□ 0.31
RBFOX1-206ENST00000535565 RPP21Q9H633 154 aaKnown RBP16.98■□□□□ 0.31
RBFOX1-206ENST00000535565 A8MTW9 85 aa16.97■□□□□ 0.31
RBFOX1-206ENST00000535565 J3KRW8 73 aa16.97■□□□□ 0.31
RBFOX1-206ENST00000535565 PFN1P07737 140 aaKnown RBP16.97■□□□□ 0.31
RBFOX1-206ENST00000535565 TUBA4BQ9H853 241 aa16.97■□□□□ 0.31
RBFOX1-206ENST00000535565 S100PP25815 95 aa16.96■□□□□ 0.31
RBFOX1-206ENST00000535565 KLLNB2CW77 178 aa16.95■□□□□ 0.3
RBFOX1-206ENST00000535565 CDKN1BP46527 198 aa16.95■□□□□ 0.3
RBFOX1-206ENST00000535565 CT83Q5H943 113 aa16.95■□□□□ 0.3
RBFOX1-206ENST00000535565 CLUHP3Q96NS8 147 aa16.95■□□□□ 0.3
RBFOX1-206ENST00000535565 PRR9Q5T870 116 aa16.94■□□□□ 0.3
RBFOX1-206ENST00000535565 KCNIP4Q6PIL6 250 aa16.94■□□□□ 0.3
RBFOX1-206ENST00000535565 AMTNQ6UX39 209 aa16.94■□□□□ 0.3
RBFOX1-206ENST00000535565 IMMP2LQ96T52 175 aa16.94■□□□□ 0.3
RBFOX1-206ENST00000535565 C19orf73Q9NVV2 129 aa16.94■□□□□ 0.3
RBFOX1-206ENST00000535565 IL36BQ9NZH7 164 aa16.94■□□□□ 0.3
RBFOX1-206ENST00000535565 TRAV21A0A0B4J279 112 aa16.94■□□□□ 0.3
RBFOX1-206ENST00000535565 RNASE4P34096 147 aaKnown RBP16.94■□□□□ 0.3
RBFOX1-206ENST00000535565 OR2D3Q8NGH3 330 aa16.94■□□□□ 0.3
RBFOX1-206ENST00000535565 RIPPLY3P57055 190 aa16.93■□□□□ 0.3
RBFOX1-206ENST00000535565 SPINK13Q1W4C9 94 aa16.93■□□□□ 0.3
RBFOX1-206ENST00000535565 URGCP-MRPS24S4R325 110 aa16.93■□□□□ 0.3
RBFOX1-206ENST00000535565 A8MWL6 223 aa16.92■□□□□ 0.3
RBFOX1-206ENST00000535565 M0R2Z0 102 aa16.92■□□□□ 0.3
RBFOX1-206ENST00000535565 Q6AWC8 147 aa16.92■□□□□ 0.3
RBFOX1-206ENST00000535565 NOTCH3Q9UM47 2321 aa16.92■□□□□ 0.3
RBFOX1-206ENST00000535565 TRRAPQ9Y4A5 3859 aa16.91■□□□□ 0.3
RBFOX1-206ENST00000535565 XKRY2A2RUG3 117 aa16.91■□□□□ 0.3
RBFOX1-206ENST00000535565 C7orf71A4D174 169 aa16.91■□□□□ 0.3
RBFOX1-206ENST00000535565 TMEM189A5PLL7 270 aa16.91■□□□□ 0.3
RBFOX1-206ENST00000535565 CA1P00915 261 aaPredicted RBP16.91■□□□□ 0.3
RBFOX1-206ENST00000535565 ORM1P02763 201 aa16.91■□□□□ 0.3
RBFOX1-206ENST00000535565 TRPT1Q86TN4 253 aaKnown RBP16.91■□□□□ 0.3
RBFOX1-206ENST00000535565 WFDC10AQ9H1F0 79 aa16.91■□□□□ 0.3
RBFOX1-206ENST00000535565 TSKUQ8WUA8 353 aa16.9■□□□□ 0.3
RBFOX1-206ENST00000535565 RBMY1BA6NDE4 496 aaKnown RBP16.89■□□□□ 0.3
RBFOX1-206ENST00000535565 RBMY1EA6NEQ0 496 aaKnown RBP16.89■□□□□ 0.3
RBFOX1-206ENST00000535565 RBMY1DP0C7P1 496 aaKnown RBP16.89■□□□□ 0.3
RBFOX1-206ENST00000535565 RPS20P60866 119 aaKnown RBP16.89■□□□□ 0.3
RBFOX1-206ENST00000535565 NUTF2P61970 127 aaKnown RBP16.89■□□□□ 0.3
RBFOX1-206ENST00000535565 RPL19P84098 196 aaKnown RBP16.89■□□□□ 0.3
RBFOX1-206ENST00000535565 KIR3DS1Q14943 382 aa16.89■□□□□ 0.3
RBFOX1-206ENST00000535565 OXLD1Q5BKU9 147 aa16.89■□□□□ 0.3
RBFOX1-206ENST00000535565 ZMAT5Q9UDW3 170 aaKnown RBP16.89■□□□□ 0.3
RBFOX1-206ENST00000535565 TRAV12-2A0A075B6T6 113 aa16.89■□□□□ 0.29
RBFOX1-206ENST00000535565 SMIM27A0A1W2PRY6 76 aa16.89■□□□□ 0.29
RBFOX1-206ENST00000535565 ELOBQ15370 118 aa16.89■□□□□ 0.29
RBFOX1-206ENST00000535565 LINC01559Q495D7 138 aa16.89■□□□□ 0.29
RBFOX1-206ENST00000535565 GFI1BQ5VTD9 330 aa16.89■□□□□ 0.29
RBFOX1-206ENST00000535565 AMBPP02760 352 aa16.88■□□□□ 0.29
RBFOX1-206ENST00000535565 FAM3BP58499 235 aaPredicted RBP16.88■□□□□ 0.29
RBFOX1-206ENST00000535565 FXYD7P58549 80 aa16.88■□□□□ 0.29
RBFOX1-206ENST00000535565 GFRA4Q9GZZ7 299 aa16.88■□□□□ 0.29
RBFOX1-206ENST00000535565 TRAV12-3A0A0B4J271 114 aa16.87■□□□□ 0.29
RBFOX1-206ENST00000535565 TCL1AP56279 114 aa16.87■□□□□ 0.29
RBFOX1-206ENST00000535565 DEFB125Q8N687 156 aa16.87■□□□□ 0.29
RBFOX1-206ENST00000535565 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.87■□□□□ 0.29
RBFOX1-206ENST00000535565 NAT8BQ9UHF3 227 aa16.87■□□□□ 0.29
RBFOX1-206ENST00000535565 TMSB15BA0A087X1C1 80 aa16.86■□□□□ 0.29
RBFOX1-206ENST00000535565 A0A1W2PPQ1 181 aa16.86■□□□□ 0.29
RBFOX1-206ENST00000535565 FAM231BA6NCW3 169 aa16.86■□□□□ 0.29
RBFOX1-206ENST00000535565 BTF3L4Q96K17 158 aa16.86■□□□□ 0.29
RBFOX1-206ENST00000535565 YPEL4Q96NS1 127 aa16.86■□□□□ 0.29
RBFOX1-206ENST00000535565 NEU1Q99519 415 aa16.86■□□□□ 0.29
RBFOX1-206ENST00000535565 NAGKQ9UJ70 344 aa16.86■□□□□ 0.29
RBFOX1-206ENST00000535565 TRAV9-1A0A075B6T8 112 aa16.85■□□□□ 0.29
RBFOX1-206ENST00000535565 Q6ZQT7 251 aa16.85■□□□□ 0.29
RBFOX1-206ENST00000535565 C11orf21Q9P2W6 132 aa16.85■□□□□ 0.29
RBFOX1-206ENST00000535565 IGKV3D-20A0A0C4DH25 116 aa16.84■□□□□ 0.29
RBFOX1-206ENST00000535565 HIGD1CA8MV81 97 aa16.84■□□□□ 0.29
RBFOX1-206ENST00000535565 ZNF324O75467 553 aaPredicted RBP16.84■□□□□ 0.29
RBFOX1-206ENST00000535565 GZMBP10144 247 aa16.84■□□□□ 0.29
RBFOX1-206ENST00000535565 FAM159AQ6UWV7 190 aa16.84■□□□□ 0.29
RBFOX1-206ENST00000535565 ANK2Q01484 3957 aa16.83■□□□□ 0.29
RBFOX1-206ENST00000535565 TRBV24-1A0A075B6N3 115 aa16.83■□□□□ 0.28
RBFOX1-206ENST00000535565 TGIF2-C20orf24A0A0A6YYL0 155 aa16.83■□□□□ 0.28
RBFOX1-206ENST00000535565 COLCA2A8K830 154 aa16.83■□□□□ 0.28
RBFOX1-206ENST00000535565 CRXO43186 299 aaPredicted RBP16.83■□□□□ 0.28
RBFOX1-206ENST00000535565 INSP01308 110 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms