RNA–Protein interactions for RNA: ENST00000534720.1

NPIPA1-204, Transcript of nuclear pore complex interacting protein family member A1, human

TSL 5

Gene NPIPA1, Length 1,915 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPA1-204	ENST00000534720	PRB4	P10163	310 aa	Predicted RBP	4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	HOXD3	P31249	432 aa	Predicted RBP	4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	CRIP1	P50238	77 aa		4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	TCL1A	P56279	114 aa		4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	SAMD13	Q5VXD3	122 aa		4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	C9orf47	Q6ZRZ4	202 aa		4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720		Q71RC1	249 aa	Predicted RBP	4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	NUP35	Q8NFH5	326 aa		4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	WIPF2	Q8TF74	440 aa	Predicted RBP	4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	C4orf3	Q8WVX3	66 aa		4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	NEU1	Q99519	415 aa		4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	C2orf88	Q9BSF0	95 aa		4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	C16orf95	Q9H693	158 aa		4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	HIGD1C	A8MV81	97 aa		4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	LINC01619	G3V211	115 aa		4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	OVOL1	O14753	267 aa		4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	TNFRSF6B	O95407	300 aa		4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	MT-ND6	P03923	174 aa		4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	FOXA3	P55318	350 aa	Predicted RBP	4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	HILS1	P60008	231 aa		4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	ERCC8	Q13216	396 aa		4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	KLF5	Q13887	457 aa	Predicted RBP	4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	TCTEX1D4	Q5JR98	221 aa		4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	TMEM78	Q5T7P6	136 aa		4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	TCF24	Q7RTU0	167 aa		4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	ATP5L2	Q7Z4Y8	100 aa		4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	ZNF664	Q8N3J9	261 aa		4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	C20orf173	Q96LM9	149 aa		4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	ASCL2	Q99929	193 aa		4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	SMR3A	Q99954	134 aa		4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.93	□□□□□ -1.62
NPIPA1-204	ENST00000534720	SNURFL	B1AK76	121 aa		4.92	□□□□□ -1.62
NPIPA1-204	ENST00000534720	SPINK4	O60575	86 aa		4.92	□□□□□ -1.62
NPIPA1-204	ENST00000534720	HLA-DQA1	P01909	254 aa		4.92	□□□□□ -1.62
NPIPA1-204	ENST00000534720	EDN2	P20800	178 aa		4.92	□□□□□ -1.62
NPIPA1-204	ENST00000534720	CBLN1	P23435	193 aa		4.92	□□□□□ -1.62
NPIPA1-204	ENST00000534720	ID1	P41134	155 aa		4.92	□□□□□ -1.62
NPIPA1-204	ENST00000534720	ZNF138	P52744	262 aa		4.92	□□□□□ -1.62
NPIPA1-204	ENST00000534720	SYNJ2BP	P57105	145 aa		4.92	□□□□□ -1.62
NPIPA1-204	ENST00000534720	FAM162B	Q5T6X4	162 aa		4.92	□□□□□ -1.62
NPIPA1-204	ENST00000534720	TMEM136	Q6ZRR5	245 aa		4.92	□□□□□ -1.62
NPIPA1-204	ENST00000534720	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.92	□□□□□ -1.62
NPIPA1-204	ENST00000534720	C18orf65	Q6ZTR6	163 aa		4.92	□□□□□ -1.62
NPIPA1-204	ENST00000534720		Q8N3U1	123 aa		4.92	□□□□□ -1.62
NPIPA1-204	ENST00000534720	ZNF738	Q8NE65	137 aa		4.92	□□□□□ -1.62
NPIPA1-204	ENST00000534720	OR2D3	Q8NGH3	330 aa		4.92	□□□□□ -1.62
NPIPA1-204	ENST00000534720		Q8TAT8	98 aa		4.92	□□□□□ -1.62
NPIPA1-204	ENST00000534720	LINC00477	Q96M19	166 aa		4.92	□□□□□ -1.62
NPIPA1-204	ENST00000534720	JMJD8	Q96S16	334 aa		4.92	□□□□□ -1.62
NPIPA1-204	ENST00000534720	AGPAT4-IT1	Q9H0P7	198 aa		4.92	□□□□□ -1.62
NPIPA1-204	ENST00000534720	LENEP	Q9Y5L5	61 aa		4.92	□□□□□ -1.62
NPIPA1-204	ENST00000534720		A0A1B0GXF2	115 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	C2orf70	A6NJV1	201 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	FABP5P3	A8MUU1	101 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	TSTD3	H0UI37	97 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	SH2D1A	O60880	128 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	FRMD6-AS1	P0C7T7	363 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	RPS20	P60866	119 aa	Known RBP	4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	MRPL54	Q6P161	138 aa	Known RBP	4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	OR11H1	Q8NG94	326 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	OR1N2	Q8NGR9	330 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	GTSF1	Q8WW33	167 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	DPF1	Q92782	380 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	NDUFAF3	Q9BU61	184 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	ANK3	Q12955	4377 aa	Known RBP	4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	XKRY2	A2RUG3	117 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	TMEM189	A5PLL7	270 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720		M0QZ24	198 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	NDUFA7	O95182	113 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	ZNF80	P51504	273 aa	Predicted RBP	4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	SLURP1	P55000	103 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	HIST1H1A	Q02539	215 aa	Predicted RBP	4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	DEFB136	Q30KP8	78 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	KHDC1L	Q5JSQ8	128 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	LCE1D	Q5T752	114 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720		Q6AWC8	147 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720		Q8N1Y9	231 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	KLHL30-AS1	Q8NEE0	82 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	OR10J6P	Q8NGY7	276 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	LINC01006	Q8NI28	216 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	DCANP1	Q8TF63	244 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	PGLYRP4	Q96LB8	373 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	C19orf73	Q9NVV2	129 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	PEMT	Q9UBM1	199 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	HIVEP2	P31629	2446 aa		4.91	□□□□□ -1.62
NPIPA1-204	ENST00000534720	IGKV3-7	A0A075B6H7	116 aa		4.9	□□□□□ -1.62
NPIPA1-204	ENST00000534720	TRBV7-9	A0A0J9YWB2	115 aa		4.9	□□□□□ -1.62
NPIPA1-204	ENST00000534720		K7EQG2	157 aa		4.9	□□□□□ -1.62
NPIPA1-204	ENST00000534720	RAB4B	P61018	213 aa		4.9	□□□□□ -1.62
NPIPA1-204	ENST00000534720	HBB	P68871	147 aa		4.9	□□□□□ -1.62
NPIPA1-204	ENST00000534720	ZNF124	Q15973	351 aa		4.9	□□□□□ -1.62
NPIPA1-204	ENST00000534720	OR8A1	Q8NGG7	326 aa		4.9	□□□□□ -1.62
NPIPA1-204	ENST00000534720	MS4A6A	Q9H2W1	248 aa		4.9	□□□□□ -1.62
NPIPA1-204	ENST00000534720		X6R8D5	127 aa		4.9	□□□□□ -1.62
NPIPA1-204	ENST00000534720	CD28	P10747	220 aa		4.89	□□□□□ -1.63
NPIPA1-204	ENST00000534720	LBH	Q53QV2	105 aa	Predicted RBP	4.89	□□□□□ -1.63
NPIPA1-204	ENST00000534720	ADAMTSL5	Q6ZMM2	481 aa		4.89	□□□□□ -1.63
NPIPA1-204	ENST00000534720	TSSC4	Q9Y5U2	329 aa	Predicted RBP	4.89	□□□□□ -1.63
NPIPA1-204	ENST00000534720	NF1	P21359	2839 aa		4.89	□□□□□ -1.63
NPIPA1-204	ENST00000534720	AGRN	O00468	2067 aa		4.89	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 57 ms