RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 NPYP01303 97 aa14.99□□□□□ -0.01
SMPD1-210ENST00000534405 IFITM1P13164 125 aa14.99□□□□□ -0.01
SMPD1-210ENST00000534405 FCER1GP30273 86 aa14.99□□□□□ -0.01
SMPD1-210ENST00000534405 DYNLRB1Q9NP97 96 aa14.99□□□□□ -0.01
SMPD1-210ENST00000534405 PRSS1P07477 247 aa14.98□□□□□ -0.01
SMPD1-210ENST00000534405 CNTFRP26992 372 aa14.98□□□□□ -0.01
SMPD1-210ENST00000534405 PSMB2P49721 201 aa14.98□□□□□ -0.01
SMPD1-210ENST00000534405 HCP5Q6MZN7 132 aa14.98□□□□□ -0.01
SMPD1-210ENST00000534405 Q6Q795 121 aa14.98□□□□□ -0.01
SMPD1-210ENST00000534405 OTORQ9NRC9 128 aa14.98□□□□□ -0.01
SMPD1-210ENST00000534405 KAAG1Q9UBP8 84 aa14.98□□□□□ -0.01
SMPD1-210ENST00000534405 ENSAO43768 121 aaKnown RBP14.98□□□□□ -0.01
SMPD1-210ENST00000534405 APELAP0DMC3 54 aa14.98□□□□□ -0.01
SMPD1-210ENST00000534405 AJUBAQ96IF1 538 aa14.98□□□□□ -0.01
SMPD1-210ENST00000534405 FBXL15Q9H469 300 aa14.98□□□□□ -0.01
SMPD1-210ENST00000534405 TRBV20-1A0A075B6N2 111 aa14.97□□□□□ -0.01
SMPD1-210ENST00000534405 TMEM213A2RRL7 107 aa14.97□□□□□ -0.01
SMPD1-210ENST00000534405 LINC01548A6NM66 108 aa14.97□□□□□ -0.01
SMPD1-210ENST00000534405 VMA21Q3ZAQ7 101 aa14.97□□□□□ -0.01
SMPD1-210ENST00000534405 TPPP3Q9BW30 176 aa14.97□□□□□ -0.01
SMPD1-210ENST00000534405 SUB1P53999 127 aaKnown RBP eCLIP14.97□□□□□ -0.01
SMPD1-210ENST00000534405 UBE2D3P61077 147 aa14.97□□□□□ -0.01
SMPD1-210ENST00000534405 UBE2D2P62837 147 aa14.97□□□□□ -0.01
SMPD1-210ENST00000534405 ASCL5Q7RTU5 278 aa14.97□□□□□ -0.01
SMPD1-210ENST00000534405 FOXC2Q99958 501 aa14.97□□□□□ -0.01
SMPD1-210ENST00000534405 MUC6Q6W4X9 2439 aa14.96□□□□□ -0.01
SMPD1-210ENST00000534405 ORM2P19652 201 aa14.96□□□□□ -0.01
SMPD1-210ENST00000534405 TTC32Q5I0X7 151 aa14.96□□□□□ -0.01
SMPD1-210ENST00000534405 MALRD1Q5VYJ5 2156 aa14.96□□□□□ -0.01
SMPD1-210ENST00000534405 LYNX1G3V0Z9 82 aa14.96□□□□□ -0.01
SMPD1-210ENST00000534405 LYNX1P0DP58 116 aa14.96□□□□□ -0.01
SMPD1-210ENST00000534405 CKS2P33552 79 aa14.96□□□□□ -0.01
SMPD1-210ENST00000534405 ASIPP42127 132 aa14.96□□□□□ -0.01
SMPD1-210ENST00000534405 GOLT1AQ6ZVE7 132 aa14.96□□□□□ -0.01
SMPD1-210ENST00000534405 PTPRZ1P23471 2315 aaPredicted RBP14.96□□□□□ -0.02
SMPD1-210ENST00000534405 ABCA1O95477 2261 aa14.95□□□□□ -0.02
SMPD1-210ENST00000534405 IGHV3-21A0A0B4J1V1 117 aa14.95□□□□□ -0.02
SMPD1-210ENST00000534405 H3BTX0 84 aa14.95□□□□□ -0.02
SMPD1-210ENST00000534405 LEPP41159 167 aa14.95□□□□□ -0.02
SMPD1-210ENST00000534405 LYZL1Q6UWQ5 148 aa14.95□□□□□ -0.02
SMPD1-210ENST00000534405 RAB1BQ9H0U4 201 aa14.95□□□□□ -0.02
SMPD1-210ENST00000534405 TRAV40A0A0B4J280 105 aa14.94□□□□□ -0.02
SMPD1-210ENST00000534405 MYMXA0A1B0GTQ4 84 aa14.94□□□□□ -0.02
SMPD1-210ENST00000534405 A8MWV9 139 aa14.94□□□□□ -0.02
SMPD1-210ENST00000534405 SNCGO76070 127 aa14.94□□□□□ -0.02
SMPD1-210ENST00000534405 LYRM7Q5U5X0 104 aa14.94□□□□□ -0.02
SMPD1-210ENST00000534405 SSUH2Q9Y2M2 353 aa14.94□□□□□ -0.02
SMPD1-210ENST00000534405 SMKR1H3BMG3 65 aa14.94□□□□□ -0.02
SMPD1-210ENST00000534405 CRIP1P50238 77 aa14.94□□□□□ -0.02
SMPD1-210ENST00000534405 ZFP2Q6ZN57 461 aa14.94□□□□□ -0.02
SMPD1-210ENST00000534405 TMEM160Q9NX00 188 aa14.94□□□□□ -0.02
SMPD1-210ENST00000534405 FAM159AQ6UWV7 190 aa14.93□□□□□ -0.02
SMPD1-210ENST00000534405 TRAV4A0A0B4J268 109 aa14.93□□□□□ -0.02
SMPD1-210ENST00000534405 CRYGBP07316 175 aa14.93□□□□□ -0.02
SMPD1-210ENST00000534405 PVRIGQ6DKI7 326 aa14.93□□□□□ -0.02
SMPD1-210ENST00000534405 ANKRD29Q8N6D5 301 aa14.93□□□□□ -0.02
SMPD1-210ENST00000534405 TMEM75Q8N9X5 138 aa14.93□□□□□ -0.02
SMPD1-210ENST00000534405 TLN1Q9Y490 2541 aaKnown RBP14.93□□□□□ -0.02
SMPD1-210ENST00000534405 LINC01549A6NIU2 74 aa14.92□□□□□ -0.02
SMPD1-210ENST00000534405 NCBP2LA6PVI3 153 aaKnown RBP14.92□□□□□ -0.02
SMPD1-210ENST00000534405 AGRNO00468 2067 aa14.92□□□□□ -0.02
SMPD1-210ENST00000534405 IGLV1-47P01700 117 aa14.92□□□□□ -0.02
SMPD1-210ENST00000534405 RPL27AP46776 148 aaKnown RBP14.92□□□□□ -0.02
SMPD1-210ENST00000534405 PPP1R27Q86WC6 154 aa14.92□□□□□ -0.02
SMPD1-210ENST00000534405 SLC25A39Q9BZJ4 359 aaPredicted RBP14.92□□□□□ -0.02
SMPD1-210ENST00000534405 PPDPFQ9H3Y8 114 aa14.92□□□□□ -0.02
SMPD1-210ENST00000534405 TPRP12270 2363 aaKnown RBP14.91□□□□□ -0.02
SMPD1-210ENST00000534405 RELNP78509 3460 aa14.91□□□□□ -0.02
SMPD1-210ENST00000534405 LOC107984156A0A0G2JMH3 177 aa14.91□□□□□ -0.02
SMPD1-210ENST00000534405 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.91□□□□□ -0.02
SMPD1-210ENST00000534405 UBE2D1P51668 147 aa14.91□□□□□ -0.02
SMPD1-210ENST00000534405 ARL17AQ8IVW1 177 aa14.91□□□□□ -0.02
SMPD1-210ENST00000534405 TMEM190Q8WZ59 177 aa14.91□□□□□ -0.02
SMPD1-210ENST00000534405 MRPL35Q9NZE8 188 aaKnown RBP14.91□□□□□ -0.02
SMPD1-210ENST00000534405 SIGLEC9Q9Y336 463 aa14.91□□□□□ -0.02
SMPD1-210ENST00000534405 CEP295Q9C0D2 2601 aa14.9□□□□□ -0.02
SMPD1-210ENST00000534405 NGBQ9NPG2 151 aa14.9□□□□□ -0.02
SMPD1-210ENST00000534405 ZZEF1O43149 2961 aa14.9□□□□□ -0.02
SMPD1-210ENST00000534405 M0QXV9 152 aa14.9□□□□□ -0.02
SMPD1-210ENST00000534405 EXOC3-AS1Q8N2X6 119 aa14.9□□□□□ -0.02
SMPD1-210ENST00000534405 RASL11BQ9BPW5 248 aa14.9□□□□□ -0.02
SMPD1-210ENST00000534405 TMEM126AQ9H061 195 aa14.9□□□□□ -0.02
SMPD1-210ENST00000534405 NXT2Q9NPJ8 142 aaKnown RBP14.9□□□□□ -0.02
SMPD1-210ENST00000534405 IGHV1-3A0A0C4DH29 117 aa14.89□□□□□ -0.03
SMPD1-210ENST00000534405 CRLF1O75462 422 aa14.89□□□□□ -0.03
SMPD1-210ENST00000534405 TRGV9Q99603 122 aa14.89□□□□□ -0.03
SMPD1-210ENST00000534405 SPXQ9BT56 116 aa14.89□□□□□ -0.03
SMPD1-210ENST00000534405 TEX22C9J3V5 150 aa14.88□□□□□ -0.03
SMPD1-210ENST00000534405 BUB1B-PAK6H3BSN5 160 aa14.88□□□□□ -0.03
SMPD1-210ENST00000534405 TCL1BO95988 128 aa14.88□□□□□ -0.03
SMPD1-210ENST00000534405 NBL1P41271 181 aa14.88□□□□□ -0.03
SMPD1-210ENST00000534405 MEIG1Q5JSS6 88 aa14.88□□□□□ -0.03
SMPD1-210ENST00000534405 LINC01560Q8TB33 94 aa14.88□□□□□ -0.03
SMPD1-210ENST00000534405 B9A039 149 aa14.88□□□□□ -0.03
SMPD1-210ENST00000534405 COX7A1P24310 79 aa14.88□□□□□ -0.03
SMPD1-210ENST00000534405 TMEM14CQ9P0S9 112 aa14.88□□□□□ -0.03
SMPD1-210ENST00000534405 MDFICQ9P1T7 246 aa14.88□□□□□ -0.03
SMPD1-210ENST00000534405 RASL10AQ92737 203 aa14.87□□□□□ -0.03
SMPD1-210ENST00000534405 TACC2O95359 2948 aa14.87□□□□□ -0.03
SMPD1-210ENST00000534405 PTPRQQ9UMZ3 2332 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms