RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 HLA-DRB3P79483 266 aa3.03□□□□□ -1.92
CASP4-213ENST00000534356 C6orf99Q4VX62 202 aa3.03□□□□□ -1.92
CASP4-213ENST00000534356 FAM223AQ8IWN6 122 aa3.03□□□□□ -1.92
CASP4-213ENST00000534356 DNAJC9Q8WXX5 260 aa3.03□□□□□ -1.92
CASP4-213ENST00000534356 PGLYRP3Q96LB9 341 aa3.03□□□□□ -1.92
CASP4-213ENST00000534356 OR2D2Q9H210 308 aa3.03□□□□□ -1.92
CASP4-213ENST00000534356 ABRACLQ9P1F3 81 aa3.03□□□□□ -1.92
CASP4-213ENST00000534356 LRP1Q07954 4544 aaKnown RBP3.03□□□□□ -1.92
CASP4-213ENST00000534356 DNAH8Q96JB1 4490 aa3.02□□□□□ -1.93
CASP4-213ENST00000534356 DEFB131BA0A096LNP1 70 aa3.02□□□□□ -1.93
CASP4-213ENST00000534356 KNCNA6PVL3 124 aa3.02□□□□□ -1.93
CASP4-213ENST00000534356 A8MWP6 167 aa3.02□□□□□ -1.93
CASP4-213ENST00000534356 APOA2P02652 100 aa3.02□□□□□ -1.93
CASP4-213ENST00000534356 PRM2P04554 102 aa3.02□□□□□ -1.93
CASP4-213ENST00000534356 INAFM2P0DMQ5 153 aa3.02□□□□□ -1.93
CASP4-213ENST00000534356 PTHLHP12272 177 aa3.02□□□□□ -1.93
CASP4-213ENST00000534356 PSMB6P28072 239 aa3.02□□□□□ -1.93
CASP4-213ENST00000534356 CLDN12P56749 244 aa3.02□□□□□ -1.93
CASP4-213ENST00000534356 TAS2R60P59551 318 aa3.02□□□□□ -1.93
CASP4-213ENST00000534356 DEFB1P60022 68 aa3.02□□□□□ -1.93
CASP4-213ENST00000534356 HAMPP81172 84 aa3.02□□□□□ -1.93
CASP4-213ENST00000534356 ST3GAL4Q11206 333 aa3.02□□□□□ -1.93
CASP4-213ENST00000534356 LGALS9BQ3B8N2 356 aa3.02□□□□□ -1.93
CASP4-213ENST00000534356 RPL22L1Q6P5R6 122 aaKnown RBP3.02□□□□□ -1.93
CASP4-213ENST00000534356 ARHGAP5-AS1Q96IT6 56 aa3.02□□□□□ -1.93
CASP4-213ENST00000534356 FAM19A4Q96LR4 140 aa3.02□□□□□ -1.93
CASP4-213ENST00000534356 DERL3Q96Q80 235 aa3.02□□□□□ -1.93
CASP4-213ENST00000534356 SHANK2-AS3Q9BTD1 123 aa3.02□□□□□ -1.93
CASP4-213ENST00000534356 ZNF436Q9C0F3 470 aaPredicted RBP3.02□□□□□ -1.93
CASP4-213ENST00000534356 LPAR5Q9H1C0 372 aa3.02□□□□□ -1.93
CASP4-213ENST00000534356 ARV1Q9H2C2 271 aa3.02□□□□□ -1.93
CASP4-213ENST00000534356 C11orf68Q9H3H3 251 aaKnown RBP3.02□□□□□ -1.93
CASP4-213ENST00000534356 BABAM2Q9NXR7 383 aa3.02□□□□□ -1.93
CASP4-213ENST00000534356 MRPL27Q9P0M9 148 aaKnown RBP3.02□□□□□ -1.93
CASP4-213ENST00000534356 AP4S1Q9Y587 144 aa3.02□□□□□ -1.93
CASP4-213ENST00000534356 A0A0A6YYH2 397 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 TRAV10A0A0B4J240 114 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 IGKV2-24A0A0C4DH68 120 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 A6NJ64 397 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 TMEM14DPA8MWL7 114 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 SMLR1H3BR10 107 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 ITGB1BP1O14713 200 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 OR7C2O60412 319 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 SCO1O75880 301 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 DCTN3O75935 186 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 DHFRP00374 187 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 CD2P06729 351 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 RD3LP0DJH9 198 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 CRHBPP24387 322 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 DEFB131AP59861 70 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 SPCS3P61009 180 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 SMCO1Q147U7 214 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 VMA21Q3ZAQ7 101 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 Q499Y3 187 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 C1orf134Q5TEV5 83 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 LAIR2Q6ISS4 152 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 ZNF773Q6PK81 442 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 SPATA12Q7Z6I5 190 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 DCUN1D5Q9BTE7 237 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 PECRQ9BY49 303 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 OR51E2Q9H255 320 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 SLC2A9Q9NRM0 540 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 PLEKHJ1Q9NW61 149 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 SMPXQ9UHP9 88 aa3.01□□□□□ -1.93
CASP4-213ENST00000534356 TRBV6-7A0A0A0MS04 114 aa3□□□□□ -1.93
CASP4-213ENST00000534356 IGLC7A0M8Q6 106 aa3□□□□□ -1.93
CASP4-213ENST00000534356 ANKRD20A5PA0PJZ0 165 aa3□□□□□ -1.93
CASP4-213ENST00000534356 GYG2O15488 501 aa3□□□□□ -1.93
CASP4-213ENST00000534356 FABP7O15540 132 aa3□□□□□ -1.93
CASP4-213ENST00000534356 TGOLN2O43493 480 aa3□□□□□ -1.93
CASP4-213ENST00000534356 IFNA10P01566 189 aa3□□□□□ -1.93
CASP4-213ENST00000534356 SMR3BP02814 79 aaPredicted RBP3□□□□□ -1.93
CASP4-213ENST00000534356 FABP1P07148 127 aa3□□□□□ -1.93
CASP4-213ENST00000534356 P0C880 135 aa3□□□□□ -1.93
CASP4-213ENST00000534356 NFYAP23511 347 aaPredicted RBP3□□□□□ -1.93
CASP4-213ENST00000534356 RPL27AP46776 148 aaKnown RBP3□□□□□ -1.93
CASP4-213ENST00000534356 EMP1P54849 157 aa3□□□□□ -1.93
CASP4-213ENST00000534356 FXYD7P58549 80 aa3□□□□□ -1.93
CASP4-213ENST00000534356 RPL18AQ02543 176 aaKnown RBP3□□□□□ -1.93
CASP4-213ENST00000534356 TPBGQ13641 420 aa3□□□□□ -1.93
CASP4-213ENST00000534356 CDK10Q15131 360 aa3□□□□□ -1.93
CASP4-213ENST00000534356 AHSA2Q719I0 299 aa3□□□□□ -1.93
CASP4-213ENST00000534356 SMIM15Q7Z3B0 74 aa3□□□□□ -1.93
CASP4-213ENST00000534356 FAM19A1Q7Z5A9 133 aa3□□□□□ -1.93
CASP4-213ENST00000534356 RNASE11Q8TAA1 199 aaKnown RBP3□□□□□ -1.93
CASP4-213ENST00000534356 SMIM19Q96E16 107 aa3□□□□□ -1.93
CASP4-213ENST00000534356 CPNE2Q96FN4 548 aaPredicted RBP3□□□□□ -1.93
CASP4-213ENST00000534356 CMSS1Q9BQ75 279 aaKnown RBP3□□□□□ -1.93
CASP4-213ENST00000534356 RHPN1-AS1Q9BWJ2 59 aa3□□□□□ -1.93
CASP4-213ENST00000534356 ACOT13Q9NPJ3 140 aa3□□□□□ -1.93
CASP4-213ENST00000534356 VAX2Q9UIW0 290 aa3□□□□□ -1.93
CASP4-213ENST00000534356 UFC1Q9Y3C8 167 aa3□□□□□ -1.93
CASP4-213ENST00000534356 FAM240AA0A1B0GVK7 77 aa2.99□□□□□ -1.93
CASP4-213ENST00000534356 OR4C46A6NHA9 309 aa2.99□□□□□ -1.93
CASP4-213ENST00000534356 PSPHP1O15172 72 aa2.99□□□□□ -1.93
CASP4-213ENST00000534356 CTSGP08311 255 aa2.99□□□□□ -1.93
CASP4-213ENST00000534356 OR4E1P0C645 316 aa2.99□□□□□ -1.93
CASP4-213ENST00000534356 P0DMU3 169 aa2.99□□□□□ -1.93
CASP4-213ENST00000534356 FAM231AP0DMU4 169 aa2.99□□□□□ -1.93
CASP4-213ENST00000534356 FAM231CP0DMU5 169 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms