RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 LINC00588Q9Y4M8 146 aa9.78□□□□□ -0.84
SF3B2-215ENST00000534307 APOBP04114 4563 aaKnown RBP9.77□□□□□ -0.84
SF3B2-215ENST00000534307 RNF222A6NCQ9 220 aa9.77□□□□□ -0.85
SF3B2-215ENST00000534307 DIRC3C9JPN6 131 aa9.77□□□□□ -0.85
SF3B2-215ENST00000534307 SPINK4O60575 86 aa9.77□□□□□ -0.85
SF3B2-215ENST00000534307 CSN1S1P47710 185 aa9.77□□□□□ -0.85
SF3B2-215ENST00000534307 TCL1AP56279 114 aa9.77□□□□□ -0.85
SF3B2-215ENST00000534307 RAB2AP61019 212 aa9.77□□□□□ -0.85
SF3B2-215ENST00000534307 OR5I1Q13606 314 aa9.77□□□□□ -0.85
SF3B2-215ENST00000534307 ZNF266Q14584 549 aa9.77□□□□□ -0.85
SF3B2-215ENST00000534307 ACOT6Q3I5F7 207 aaPredicted RBP9.77□□□□□ -0.85
SF3B2-215ENST00000534307 GNPNAT1Q96EK6 184 aaPredicted RBP9.77□□□□□ -0.85
SF3B2-215ENST00000534307 KLF12Q9Y4X4 402 aa9.77□□□□□ -0.85
SF3B2-215ENST00000534307 LENEPQ9Y5L5 61 aa9.77□□□□□ -0.85
SF3B2-215ENST00000534307 IGHV1OR15-1A0A075B7D0 117 aa9.76□□□□□ -0.85
SF3B2-215ENST00000534307 PQLC2Q6ZP29 291 aa9.76□□□□□ -0.85
SF3B2-215ENST00000534307 OR2G3Q8NGZ4 309 aa9.76□□□□□ -0.85
SF3B2-215ENST00000534307 OTORQ9NRC9 128 aa9.76□□□□□ -0.85
SF3B2-215ENST00000534307 TRGV1A0A0A0MS02 117 aa9.75□□□□□ -0.85
SF3B2-215ENST00000534307 A0A0J9YY99 117 aa9.75□□□□□ -0.85
SF3B2-215ENST00000534307 RGS13O14921 159 aa9.75□□□□□ -0.85
SF3B2-215ENST00000534307 CCL18P55774 89 aa9.75□□□□□ -0.85
SF3B2-215ENST00000534307 Q6AWC8 147 aa9.75□□□□□ -0.85
SF3B2-215ENST00000534307 SSX7Q7RTT5 188 aa9.75□□□□□ -0.85
SF3B2-215ENST00000534307 ARL6IP6Q8N6S5 226 aa9.75□□□□□ -0.85
SF3B2-215ENST00000534307 TMED6Q8WW62 240 aa9.75□□□□□ -0.85
SF3B2-215ENST00000534307 VSIG2Q96IQ7 327 aa9.75□□□□□ -0.85
SF3B2-215ENST00000534307 NBDYA0A0U1RRE5 68 aa9.74□□□□□ -0.85
SF3B2-215ENST00000534307 PGPA6NDG6 321 aa9.74□□□□□ -0.85
SF3B2-215ENST00000534307 C1orf134Q5TEV5 83 aa9.74□□□□□ -0.85
SF3B2-215ENST00000534307 INO80EQ8NBZ0 244 aaPredicted RBP9.74□□□□□ -0.85
SF3B2-215ENST00000534307 OR10G4Q8NGN3 311 aa9.74□□□□□ -0.85
SF3B2-215ENST00000534307 OR10G9Q8NGN4 311 aa9.74□□□□□ -0.85
SF3B2-215ENST00000534307 OR10G7Q8NGN6 311 aa9.74□□□□□ -0.85
SF3B2-215ENST00000534307 OR2T35Q8NGX2 323 aa9.74□□□□□ -0.85
SF3B2-215ENST00000534307 PSMG3Q9BT73 122 aaPredicted RBP9.74□□□□□ -0.85
SF3B2-215ENST00000534307 TNFSF18Q9UNG2 199 aa9.74□□□□□ -0.85
SF3B2-215ENST00000534307 TRGV2A0A075B6R0 118 aa9.73□□□□□ -0.85
SF3B2-215ENST00000534307 A0A1W2PPV4 95 aa9.73□□□□□ -0.85
SF3B2-215ENST00000534307 HMGB3O15347 200 aaKnown RBP9.73□□□□□ -0.85
SF3B2-215ENST00000534307 STAG3L2P0CL84 134 aa9.73□□□□□ -0.85
SF3B2-215ENST00000534307 STAG3L3P0CL85 134 aa9.73□□□□□ -0.85
SF3B2-215ENST00000534307 SOHLH1Q5JUK2 328 aa9.73□□□□□ -0.85
SF3B2-215ENST00000534307 HSD17B11Q8NBQ5 300 aa9.73□□□□□ -0.85
SF3B2-215ENST00000534307 SUN5Q8TC36 379 aa9.73□□□□□ -0.85
SF3B2-215ENST00000534307 HYLS1Q96M11 299 aa9.73□□□□□ -0.85
SF3B2-215ENST00000534307 UPK3BQ9BT76 320 aa9.73□□□□□ -0.85
SF3B2-215ENST00000534307 SMLR1H3BR10 107 aa9.72□□□□□ -0.85
SF3B2-215ENST00000534307 ARL14EPLP0DKL9 152 aa9.72□□□□□ -0.85
SF3B2-215ENST00000534307 ATP6V0CP27449 155 aa9.72□□□□□ -0.85
SF3B2-215ENST00000534307 CDC34P49427 236 aaPredicted RBP9.72□□□□□ -0.85
SF3B2-215ENST00000534307 ESRGQ1W209 222 aa9.72□□□□□ -0.85
SF3B2-215ENST00000534307 TVP23CQ96ET8 276 aa9.72□□□□□ -0.85
SF3B2-215ENST00000534307 ST6GAL2Q96JF0 529 aa9.72□□□□□ -0.85
SF3B2-215ENST00000534307 ARPC5LQ9BPX5 153 aa9.72□□□□□ -0.85
SF3B2-215ENST00000534307 MRPL16Q9NX20 251 aaKnown RBP9.72□□□□□ -0.85
SF3B2-215ENST00000534307 MDFICQ9P1T7 246 aa9.72□□□□□ -0.85
SF3B2-215ENST00000534307 FXYD6-FXYD2A0A087WZ82 144 aa9.71□□□□□ -0.86
SF3B2-215ENST00000534307 A0A096LPF7 62 aa9.71□□□□□ -0.86
SF3B2-215ENST00000534307 SERF2P84101 59 aa9.71□□□□□ -0.86
SF3B2-215ENST00000534307 ZNF415Q09FC8 603 aa9.71□□□□□ -0.86
SF3B2-215ENST00000534307 TDRG1Q3Y452 100 aa9.71□□□□□ -0.86
SF3B2-215ENST00000534307 FAM74A1Q5RGS3 127 aa9.71□□□□□ -0.86
SF3B2-215ENST00000534307 MUC21Q5SSG8 566 aa9.71□□□□□ -0.86
SF3B2-215ENST00000534307 GOLT1AQ6ZVE7 132 aa9.71□□□□□ -0.86
SF3B2-215ENST00000534307 CMTM2Q8TAZ6 248 aa9.71□□□□□ -0.86
SF3B2-215ENST00000534307 RAB24Q969Q5 203 aa9.71□□□□□ -0.86
SF3B2-215ENST00000534307 KRTAP1-5Q9BYS1 174 aa9.71□□□□□ -0.86
SF3B2-215ENST00000534307 SH3BGRL3Q9H299 93 aa9.71□□□□□ -0.86
SF3B2-215ENST00000534307 DNAH5Q8TE73 4624 aa9.7□□□□□ -0.86
SF3B2-215ENST00000534307 TRAV8-1A0A0A6YYK1 113 aa9.7□□□□□ -0.86
SF3B2-215ENST00000534307 GNG5P63218 68 aa9.7□□□□□ -0.86
SF3B2-215ENST00000534307 RPL7L1Q6DKI1 246 aaKnown RBP9.7□□□□□ -0.86
SF3B2-215ENST00000534307 Q9H8V8 135 aa9.7□□□□□ -0.86
SF3B2-215ENST00000534307 RPH3ALQ9UNE2 315 aa9.7□□□□□ -0.86
SF3B2-215ENST00000534307 MRPS16Q9Y3D3 137 aaKnown RBP9.7□□□□□ -0.86
SF3B2-215ENST00000534307 MBP02144 154 aa9.69□□□□□ -0.86
SF3B2-215ENST00000534307 GCHFRP30047 84 aa9.69□□□□□ -0.86
SF3B2-215ENST00000534307 FHL2Q14192 279 aa9.69□□□□□ -0.86
SF3B2-215ENST00000534307 Q6ZNX1 250 aa9.69□□□□□ -0.86
SF3B2-215ENST00000534307 ZNF575Q86XF7 245 aa9.69□□□□□ -0.86
SF3B2-215ENST00000534307 C6orf223Q8N319 242 aa9.69□□□□□ -0.86
SF3B2-215ENST00000534307 OR11H4Q8NGC9 324 aa9.69□□□□□ -0.86
SF3B2-215ENST00000534307 CYTL1Q9NRR1 136 aa9.69□□□□□ -0.86
SF3B2-215ENST00000534307 DMBT1Q9UGM3 2413 aaPredicted RBP9.68□□□□□ -0.86
SF3B2-215ENST00000534307 IGHV3-53P01767 116 aa9.68□□□□□ -0.86
SF3B2-215ENST00000534307 TNP2Q05952 138 aa9.68□□□□□ -0.86
SF3B2-215ENST00000534307 TMEM183BQ1AE95 376 aa9.68□□□□□ -0.86
SF3B2-215ENST00000534307 FAM159AQ6UWV7 190 aa9.68□□□□□ -0.86
SF3B2-215ENST00000534307 TMEM183AQ8IXX5 376 aa9.68□□□□□ -0.86
SF3B2-215ENST00000534307 C5orf17Q8NAS9 161 aa9.68□□□□□ -0.86
SF3B2-215ENST00000534307 RASL10AQ92737 203 aa9.68□□□□□ -0.86
SF3B2-215ENST00000534307 TRGV11A0A075B6L2 103 aa9.67□□□□□ -0.86
SF3B2-215ENST00000534307 BORCS7-ASMTA0A0B4J1R7 106 aa9.67□□□□□ -0.86
SF3B2-215ENST00000534307 TRAV21A0A0B4J279 112 aa9.67□□□□□ -0.86
SF3B2-215ENST00000534307 SERTM2A0A1B0GWG4 89 aa9.67□□□□□ -0.86
SF3B2-215ENST00000534307 GGTLC3B5MD39 225 aa9.67□□□□□ -0.86
SF3B2-215ENST00000534307 F6UZH7 168 aa9.67□□□□□ -0.86
SF3B2-215ENST00000534307 TAAR5O14804 337 aa9.67□□□□□ -0.86
SF3B2-215ENST00000534307 PAX4O43316 350 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms