RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 LTAP01374 205 aa11.31□□□□□ -0.6
CTTN-215ENST00000533931 Q6AWC8 147 aa11.31□□□□□ -0.6
CTTN-215ENST00000533931 OR11H2Q8NH07 326 aa11.31□□□□□ -0.6
CTTN-215ENST00000533931 TVP23CQ96ET8 276 aa11.31□□□□□ -0.6
CTTN-215ENST00000533931 SMIM12Q96EX1 92 aa11.31□□□□□ -0.6
CTTN-215ENST00000533931 LINC00479Q96M42 142 aa11.31□□□□□ -0.6
CTTN-215ENST00000533931 RARRES2Q99969 163 aa11.31□□□□□ -0.6
CTTN-215ENST00000533931 PYGO2Q9BRQ0 406 aa11.31□□□□□ -0.6
CTTN-215ENST00000533931 NIPSNAP3BQ9BS92 247 aa11.31□□□□□ -0.6
CTTN-215ENST00000533931 PRNTQ86SH4 94 aa11.3□□□□□ -0.6
CTTN-215ENST00000533931 TMEM208Q9BTX3 173 aa11.3□□□□□ -0.6
CTTN-215ENST00000533931 U3KQK5 164 aa11.3□□□□□ -0.6
CTTN-215ENST00000533931 X6R8D5 127 aa11.3□□□□□ -0.6
CTTN-215ENST00000533931 TRAV34A0A0B4J273 112 aa11.29□□□□□ -0.6
CTTN-215ENST00000533931 ZNF324O75467 553 aaPredicted RBP11.29□□□□□ -0.6
CTTN-215ENST00000533931 SMUG1Q53HV7 270 aa11.29□□□□□ -0.6
CTTN-215ENST00000533931 TOR2AQ5JU69 321 aa11.29□□□□□ -0.6
CTTN-215ENST00000533931 EIF5A2Q9GZV4 153 aaKnown RBP11.29□□□□□ -0.6
CTTN-215ENST00000533931 C11orf68Q9H3H3 251 aaKnown RBP11.29□□□□□ -0.6
CTTN-215ENST00000533931 RETNQ9HD89 108 aa11.29□□□□□ -0.6
CTTN-215ENST00000533931 MED9Q9NWA0 146 aa11.29□□□□□ -0.6
CTTN-215ENST00000533931 TRAV12-3A0A0B4J271 114 aa11.28□□□□□ -0.6
CTTN-215ENST00000533931 TRAV21A0A0B4J279 112 aa11.28□□□□□ -0.6
CTTN-215ENST00000533931 TMEM189A5PLL7 270 aa11.28□□□□□ -0.6
CTTN-215ENST00000533931 RBMY1A1P0DJD3 496 aaKnown RBP11.28□□□□□ -0.6
CTTN-215ENST00000533931 RBMY1CP0DJD4 496 aa11.28□□□□□ -0.6
CTTN-215ENST00000533931 RNASE4P34096 147 aaKnown RBP11.28□□□□□ -0.6
CTTN-215ENST00000533931 RPL35P42766 123 aaKnown RBP11.28□□□□□ -0.6
CTTN-215ENST00000533931 BTN1A1Q13410 526 aa11.28□□□□□ -0.6
CTTN-215ENST00000533931 KIR3DS1Q14943 382 aa11.28□□□□□ -0.6
CTTN-215ENST00000533931 RBMY1FQ15415 496 aaKnown RBP11.28□□□□□ -0.6
CTTN-215ENST00000533931 PRR9Q5T870 116 aa11.28□□□□□ -0.6
CTTN-215ENST00000533931 TMEM183AQ8IXX5 376 aa11.28□□□□□ -0.6
CTTN-215ENST00000533931 PCNPQ8WW12 178 aaKnown RBP11.28□□□□□ -0.6
CTTN-215ENST00000533931 SGK494Q96LW2 274 aa11.28□□□□□ -0.6
CTTN-215ENST00000533931 PEA15Q15121 130 aa11.27□□□□□ -0.61
CTTN-215ENST00000533931 RRN3P1Q2M238 152 aa11.27□□□□□ -0.61
CTTN-215ENST00000533931 ZNF493Q6ZR52 646 aa11.27□□□□□ -0.61
CTTN-215ENST00000533931 Q8NAQ8 132 aa11.27□□□□□ -0.61
CTTN-215ENST00000533931 LINC01587Q99440 93 aa11.27□□□□□ -0.61
CTTN-215ENST00000533931 MLST8Q9BVC4 326 aa11.27□□□□□ -0.61
CTTN-215ENST00000533931 TENM3Q9P273 2699 aa11.26□□□□□ -0.61
CTTN-215ENST00000533931 RAB19A4D1S5 217 aa11.26□□□□□ -0.61
CTTN-215ENST00000533931 C9JCJ5 164 aa11.26□□□□□ -0.61
CTTN-215ENST00000533931 GCGP01275 180 aa11.26□□□□□ -0.61
CTTN-215ENST00000533931 PFN1P07737 140 aaKnown RBP11.26□□□□□ -0.61
CTTN-215ENST00000533931 TDRG1Q3Y452 100 aa11.26□□□□□ -0.61
CTTN-215ENST00000533931 ANXA2RQ3ZCQ2 193 aa11.26□□□□□ -0.61
CTTN-215ENST00000533931 BAGE2Q86Y30 109 aa11.26□□□□□ -0.61
CTTN-215ENST00000533931 STAB2Q8WWQ8 2551 aa11.26□□□□□ -0.61
CTTN-215ENST00000533931 DNAH9Q9NYC9 4486 aa11.25□□□□□ -0.61
CTTN-215ENST00000533931 J3KRW8 73 aa11.25□□□□□ -0.61
CTTN-215ENST00000533931 SRP19P09132 144 aaKnown RBP11.25□□□□□ -0.61
CTTN-215ENST00000533931 EIF4E3Q8N5X7 224 aaKnown RBP11.25□□□□□ -0.61
CTTN-215ENST00000533931 TMEM263Q8WUH6 116 aaKnown RBP11.25□□□□□ -0.61
CTTN-215ENST00000533931 C8orf49Q96NF6 230 aa11.25□□□□□ -0.61
CTTN-215ENST00000533931 DERL1Q9BUN8 251 aa11.25□□□□□ -0.61
CTTN-215ENST00000533931 IGHV3OR16-12A0A075B7B8 117 aa11.24□□□□□ -0.61
CTTN-215ENST00000533931 IGHV1OR15-1A0A075B7D0 117 aa11.24□□□□□ -0.61
CTTN-215ENST00000533931 IGHV4-28A0A0C4DH34 117 aa11.24□□□□□ -0.61
CTTN-215ENST00000533931 TEX48A0A1B0GUV7 120 aa11.24□□□□□ -0.61
CTTN-215ENST00000533931 FABP5P3A8MUU1 101 aa11.24□□□□□ -0.61
CTTN-215ENST00000533931 GNG4P50150 75 aa11.24□□□□□ -0.61
CTTN-215ENST00000533931 CENPWQ5EE01 88 aa11.24□□□□□ -0.61
CTTN-215ENST00000533931 C16orf74Q96GX8 76 aa11.24□□□□□ -0.61
CTTN-215ENST00000533931 KCNS1Q96KK3 526 aa11.24□□□□□ -0.61
CTTN-215ENST00000533931 PARLQ9H300 379 aa11.24□□□□□ -0.61
CTTN-215ENST00000533931 BIN3Q9NQY0 253 aa11.24□□□□□ -0.61
CTTN-215ENST00000533931 ZNF80P51504 273 aaPredicted RBP11.23□□□□□ -0.61
CTTN-215ENST00000533931 ZNF674Q2M3X9 581 aa11.23□□□□□ -0.61
CTTN-215ENST00000533931 FAM74A3Q4VXF1 159 aa11.23□□□□□ -0.61
CTTN-215ENST00000533931 IBA57Q5T440 356 aaKnown RBP11.23□□□□□ -0.61
CTTN-215ENST00000533931 FAM162BQ5T6X4 162 aa11.23□□□□□ -0.61
CTTN-215ENST00000533931 FAM159AQ6UWV7 190 aa11.23□□□□□ -0.61
CTTN-215ENST00000533931 RNASE8Q8TDE3 154 aaKnown RBP11.23□□□□□ -0.61
CTTN-215ENST00000533931 ZC2HC1AQ96GY0 325 aa11.23□□□□□ -0.61
CTTN-215ENST00000533931 EDA2RQ9HAV5 297 aa11.23□□□□□ -0.61
CTTN-215ENST00000533931 TP53TG3Q9ULZ0 132 aa11.23□□□□□ -0.61
CTTN-215ENST00000533931 LY96Q9Y6Y9 160 aa11.23□□□□□ -0.61
CTTN-215ENST00000533931 TGP01266 2768 aa11.23□□□□□ -0.61
CTTN-215ENST00000533931 TRBV20OR9-2A0A075B6H5 130 aa11.22□□□□□ -0.61
CTTN-215ENST00000533931 TRGV11A0A075B6L2 103 aa11.22□□□□□ -0.61
CTTN-215ENST00000533931 ZNF705GA8MUZ8 300 aaPredicted RBP11.21□□□□□ -0.61
CTTN-215ENST00000533931 UQCC3Q6UW78 93 aa11.21□□□□□ -0.61
CTTN-215ENST00000533931 A0A0J9YWU9 116 aa11.2□□□□□ -0.62
CTTN-215ENST00000533931 CBY3A6NI87 242 aa11.2□□□□□ -0.62
CTTN-215ENST00000533931 IGLV2-8P01709 118 aa11.2□□□□□ -0.62
CTTN-215ENST00000533931 CRIP1P50238 77 aa11.2□□□□□ -0.62
CTTN-215ENST00000533931 SMIM7Q9BQ49 75 aa11.2□□□□□ -0.62
CTTN-215ENST00000533931 SDF2L1Q9HCN8 221 aa11.2□□□□□ -0.62
CTTN-215ENST00000533931 PLAC8L1A1L4L8 177 aa11.19□□□□□ -0.62
CTTN-215ENST00000533931 LYRM9A8MSI8 78 aa11.19□□□□□ -0.62
CTTN-215ENST00000533931 SH2D1AO60880 128 aa11.19□□□□□ -0.62
CTTN-215ENST00000533931 DAZ2Q13117 558 aaKnown RBP11.19□□□□□ -0.62
CTTN-215ENST00000533931 IL17DQ8TAD2 202 aa11.19□□□□□ -0.62
CTTN-215ENST00000533931 HUWE1Q7Z6Z7 4374 aaKnown RBP11.18□□□□□ -0.62
CTTN-215ENST00000533931 LINC00862A6NCI5 91 aa11.18□□□□□ -0.62
CTTN-215ENST00000533931 ZNF727A8MUV8 499 aa11.18□□□□□ -0.62
CTTN-215ENST00000533931 C9JQL5 133 aa11.18□□□□□ -0.62
CTTN-215ENST00000533931 CXCL1P09341 107 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 284.8 ms