RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 WFDC1Q9HC57 220 aa10.72□□□□□ -0.69
CPSF1-211ENST00000533492 PGPA6NDG6 321 aa10.71□□□□□ -0.69
CPSF1-211ENST00000533492 DIRC3C9JPN6 131 aa10.71□□□□□ -0.69
CPSF1-211ENST00000533492 EIF3GO75821 320 aaKnown RBP eCLIP10.71□□□□□ -0.69
CPSF1-211ENST00000533492 ZNF415Q09FC8 603 aa10.71□□□□□ -0.69
CPSF1-211ENST00000533492 ZNF266Q14584 549 aa10.71□□□□□ -0.69
CPSF1-211ENST00000533492 OTORQ9NRC9 128 aa10.71□□□□□ -0.69
CPSF1-211ENST00000533492 MRPL16Q9NX20 251 aaKnown RBP10.71□□□□□ -0.69
CPSF1-211ENST00000533492 LENEPQ9Y5L5 61 aa10.71□□□□□ -0.69
CPSF1-211ENST00000533492 ALG5Q9Y673 324 aa10.71□□□□□ -0.69
CPSF1-211ENST00000533492 TNP2Q05952 138 aa10.7□□□□□ -0.7
CPSF1-211ENST00000533492 TTC32Q5I0X7 151 aa10.7□□□□□ -0.7
CPSF1-211ENST00000533492 MUC21Q5SSG8 566 aa10.7□□□□□ -0.7
CPSF1-211ENST00000533492 PQLC2Q6ZP29 291 aa10.7□□□□□ -0.7
CPSF1-211ENST00000533492 VSIG2Q96IQ7 327 aa10.7□□□□□ -0.7
CPSF1-211ENST00000533492 ST6GAL2Q96JF0 529 aa10.7□□□□□ -0.7
CPSF1-211ENST00000533492 RPH3ALQ9UNE2 315 aa10.7□□□□□ -0.7
CPSF1-211ENST00000533492 MUC4Q99102 2169 aa10.7□□□□□ -0.7
CPSF1-211ENST00000533492 A0A096LPF7 62 aa10.69□□□□□ -0.7
CPSF1-211ENST00000533492 PAX4O43316 350 aa10.69□□□□□ -0.7
CPSF1-211ENST00000533492 IGHV3-53P01767 116 aa10.69□□□□□ -0.7
CPSF1-211ENST00000533492 SLAQ13239 276 aa10.69□□□□□ -0.7
CPSF1-211ENST00000533492 FAM159AQ6UWV7 190 aa10.69□□□□□ -0.7
CPSF1-211ENST00000533492 OR10G4Q8NGN3 311 aa10.69□□□□□ -0.7
CPSF1-211ENST00000533492 OR10G9Q8NGN4 311 aa10.69□□□□□ -0.7
CPSF1-211ENST00000533492 OR10G7Q8NGN6 311 aa10.69□□□□□ -0.7
CPSF1-211ENST00000533492 UPK3BQ9BT76 320 aa10.69□□□□□ -0.7
CPSF1-211ENST00000533492 MED28Q9H204 178 aa10.69□□□□□ -0.7
CPSF1-211ENST00000533492 MRPS16Q9Y3D3 137 aaKnown RBP10.69□□□□□ -0.7
CPSF1-211ENST00000533492 HERC2O95714 4834 aa10.69□□□□□ -0.7
CPSF1-211ENST00000533492 RAB2AP61019 212 aa10.68□□□□□ -0.7
CPSF1-211ENST00000533492 ZNF575Q86XF7 245 aa10.68□□□□□ -0.7
CPSF1-211ENST00000533492 TMED6Q8WW62 240 aa10.68□□□□□ -0.7
CPSF1-211ENST00000533492 PRO0255Q9UI72 69 aa10.68□□□□□ -0.7
CPSF1-211ENST00000533492 ICOSQ9Y6W8 199 aa10.68□□□□□ -0.7
CPSF1-211ENST00000533492 KIAA1109Q2LD37 5005 aa10.68□□□□□ -0.7
CPSF1-211ENST00000533492 HMGB3O15347 200 aaKnown RBP10.67□□□□□ -0.7
CPSF1-211ENST00000533492 PTTG1O95997 202 aa10.67□□□□□ -0.7
CPSF1-211ENST00000533492 TMEM183BQ1AE95 376 aa10.67□□□□□ -0.7
CPSF1-211ENST00000533492 Q6AWC8 147 aa10.67□□□□□ -0.7
CPSF1-211ENST00000533492 GOLT1AQ6ZVE7 132 aa10.67□□□□□ -0.7
CPSF1-211ENST00000533492 TMEM183AQ8IXX5 376 aa10.67□□□□□ -0.7
CPSF1-211ENST00000533492 MDFICQ9P1T7 246 aa10.67□□□□□ -0.7
CPSF1-211ENST00000533492 HHLA3Q9XRX5 114 aa10.67□□□□□ -0.7
CPSF1-211ENST00000533492 PKD1P98161 4303 aa10.67□□□□□ -0.7
CPSF1-211ENST00000533492 TRGV11A0A075B6L2 103 aa10.66□□□□□ -0.7
CPSF1-211ENST00000533492 TRGV4A0A0C4DH28 118 aa10.66□□□□□ -0.7
CPSF1-211ENST00000533492 A0A1W2PPQ1 181 aa10.66□□□□□ -0.7
CPSF1-211ENST00000533492 ARL6IP6Q8N6S5 226 aa10.66□□□□□ -0.7
CPSF1-211ENST00000533492 HSD17B11Q8NBQ5 300 aa10.66□□□□□ -0.7
CPSF1-211ENST00000533492 SPXQ9BT56 116 aa10.66□□□□□ -0.7
CPSF1-211ENST00000533492 KRTAP17-1Q9BYP8 105 aa10.66□□□□□ -0.7
CPSF1-211ENST00000533492 NAGKQ9UJ70 344 aa10.66□□□□□ -0.7
CPSF1-211ENST00000533492 PKHD1P08F94 4074 aa10.66□□□□□ -0.7
CPSF1-211ENST00000533492 CDC34P49427 236 aaPredicted RBP10.65□□□□□ -0.7
CPSF1-211ENST00000533492 CRYBA4P53673 196 aa10.65□□□□□ -0.7
CPSF1-211ENST00000533492 C8orf49Q96NF6 230 aa10.65□□□□□ -0.7
CPSF1-211ENST00000533492 TRAV21A0A0B4J279 112 aa10.64□□□□□ -0.71
CPSF1-211ENST00000533492 C16orf90A8MZG2 172 aa10.64□□□□□ -0.71
CPSF1-211ENST00000533492 MBP02144 154 aa10.64□□□□□ -0.71
CPSF1-211ENST00000533492 ARL14EPLP0DKL9 152 aa10.64□□□□□ -0.71
CPSF1-211ENST00000533492 FHL2Q14192 279 aa10.64□□□□□ -0.71
CPSF1-211ENST00000533492 MRPL23Q16540 153 aaKnown RBP10.64□□□□□ -0.71
CPSF1-211ENST00000533492 OR2G3Q8NGZ4 309 aa10.64□□□□□ -0.71
CPSF1-211ENST00000533492 AQP10Q96PS8 301 aa10.64□□□□□ -0.71
CPSF1-211ENST00000533492 KRTAP1-5Q9BYS1 174 aa10.64□□□□□ -0.71
CPSF1-211ENST00000533492 TREM1Q9NP99 234 aa10.64□□□□□ -0.71
CPSF1-211ENST00000533492 TRAV8-1A0A0A6YYK1 113 aa10.63□□□□□ -0.71
CPSF1-211ENST00000533492 SIVA1O15304 175 aa10.63□□□□□ -0.71
CPSF1-211ENST00000533492 STAG3L2P0CL84 134 aa10.63□□□□□ -0.71
CPSF1-211ENST00000533492 STAG3L3P0CL85 134 aa10.63□□□□□ -0.71
CPSF1-211ENST00000533492 ATP6V0CP27449 155 aa10.63□□□□□ -0.71
CPSF1-211ENST00000533492 GNG5P63218 68 aa10.63□□□□□ -0.71
CPSF1-211ENST00000533492 RASL10AQ92737 203 aa10.63□□□□□ -0.71
CPSF1-211ENST00000533492 RAB24Q969Q5 203 aa10.63□□□□□ -0.71
CPSF1-211ENST00000533492 NDFIP1Q9BT67 221 aa10.63□□□□□ -0.71
CPSF1-211ENST00000533492 PSMG3Q9BT73 122 aaPredicted RBP10.63□□□□□ -0.71
CPSF1-211ENST00000533492 F6UZH7 168 aa10.62□□□□□ -0.71
CPSF1-211ENST00000533492 K7EQM0 130 aa10.62□□□□□ -0.71
CPSF1-211ENST00000533492 GNRH2O43555 120 aa10.62□□□□□ -0.71
CPSF1-211ENST00000533492 SFTA3P0C7M3 94 aa10.62□□□□□ -0.71
CPSF1-211ENST00000533492 BTF3P20290 206 aaKnown RBP10.62□□□□□ -0.71
CPSF1-211ENST00000533492 SERF2P84101 59 aa10.62□□□□□ -0.71
CPSF1-211ENST00000533492 TDRG1Q3Y452 100 aa10.62□□□□□ -0.71
CPSF1-211ENST00000533492 INO80EQ8NBZ0 244 aaPredicted RBP10.62□□□□□ -0.71
CPSF1-211ENST00000533492 SERTM2A0A1B0GWG4 89 aa10.61□□□□□ -0.71
CPSF1-211ENST00000533492 NXPH4O95158 308 aa10.61□□□□□ -0.71
CPSF1-211ENST00000533492 GCHFRP30047 84 aa10.61□□□□□ -0.71
CPSF1-211ENST00000533492 LYPD5Q6UWN5 251 aa10.61□□□□□ -0.71
CPSF1-211ENST00000533492 NEGR1Q7Z3B1 354 aa10.61□□□□□ -0.71
CPSF1-211ENST00000533492 IQCF2Q8IXL9 164 aa10.61□□□□□ -0.71
CPSF1-211ENST00000533492 PCNPQ8WW12 178 aaKnown RBP10.61□□□□□ -0.71
CPSF1-211ENST00000533492 ASB13Q8WXK3 278 aa10.61□□□□□ -0.71
CPSF1-211ENST00000533492 TVP23CQ96ET8 276 aa10.61□□□□□ -0.71
CPSF1-211ENST00000533492 ZNF479Q96JC4 524 aa10.61□□□□□ -0.71
CPSF1-211ENST00000533492 KCNS1Q96KK3 526 aa10.61□□□□□ -0.71
CPSF1-211ENST00000533492 SGK494Q96LW2 274 aa10.61□□□□□ -0.71
CPSF1-211ENST00000533492 ACTR3CQ9C0K3 210 aaPredicted RBP10.61□□□□□ -0.71
CPSF1-211ENST00000533492 SDF2L1Q9HCN8 221 aa10.61□□□□□ -0.71
CPSF1-211ENST00000533492 DNAH11Q96DT5 4516 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms