RNA–Protein interactions for RNA: ENST00000533333.5

PAX6-228, Transcript of paired box 6, humanhuman

TSL 2

Gene PAX6, Length 6,173 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-228ENST00000533333 LGALS9CQ6DKI2 356 aa14.03□□□□□ -0.16
PAX6-228ENST00000533333 NDUFC2O95298 119 aa14.03□□□□□ -0.16
PAX6-228ENST00000533333 RNF144BQ7Z419 303 aa14.03□□□□□ -0.16
PAX6-228ENST00000533333 COX7A2LO14548 114 aa14.02□□□□□ -0.16
PAX6-228ENST00000533333 WDR86Q86TI4 376 aa14.02□□□□□ -0.16
PAX6-228ENST00000533333 ZDBF2Q9HCK1 2354 aa14.02□□□□□ -0.16
PAX6-228ENST00000533333 GNRH2O43555 120 aa14.02□□□□□ -0.16
PAX6-228ENST00000533333 APRG1Q8IVJ8 170 aa14.02□□□□□ -0.16
PAX6-228ENST00000533333 H3BMG7 143 aa14.02□□□□□ -0.17
PAX6-228ENST00000533333 ATP5G1P05496 136 aa14.02□□□□□ -0.17
PAX6-228ENST00000533333 DEFB136Q30KP8 78 aa14.02□□□□□ -0.17
PAX6-228ENST00000533333 CYYR1Q96J86 154 aa14.02□□□□□ -0.17
PAX6-228ENST00000533333 KLK5Q9Y337 293 aaPredicted RBP14.02□□□□□ -0.17
PAX6-228ENST00000533333 WIPF3A6NGB9 483 aa14.02□□□□□ -0.17
PAX6-228ENST00000533333 CSRP3P50461 194 aa14.02□□□□□ -0.17
PAX6-228ENST00000533333 HIST2H2BCQ6DN03 193 aa14.02□□□□□ -0.17
PAX6-228ENST00000533333 VOPP1Q96AW1 172 aa14.02□□□□□ -0.17
PAX6-228ENST00000533333 C20orf78Q9BR46 151 aa14.02□□□□□ -0.17
PAX6-228ENST00000533333 ESM1Q9NQ30 184 aa14.02□□□□□ -0.17
PAX6-228ENST00000533333 H0Y9J4 135 aa14.01□□□□□ -0.17
PAX6-228ENST00000533333 B3GALT5-AS1P59052 145 aa14.01□□□□□ -0.17
PAX6-228ENST00000533333 TM2D2Q9BX73 214 aa14.01□□□□□ -0.17
PAX6-228ENST00000533333 ATP6V0E2Q8NHE4 81 aa14.01□□□□□ -0.17
PAX6-228ENST00000533333 COX8AP10176 69 aa14.01□□□□□ -0.17
PAX6-228ENST00000533333 PYGO2Q9BRQ0 406 aa14.01□□□□□ -0.17
PAX6-228ENST00000533333 NCR3O14931 201 aa14.01□□□□□ -0.17
PAX6-228ENST00000533333 ARTNQ5T4W7 220 aa14.01□□□□□ -0.17
PAX6-228ENST00000533333 SEM1Q6ZVN7 128 aa14.01□□□□□ -0.17
PAX6-228ENST00000533333 FANCMQ8IYD8 2048 aa14.01□□□□□ -0.17
PAX6-228ENST00000533333 NPBQ8NG41 125 aa14.01□□□□□ -0.17
PAX6-228ENST00000533333 IGFBPL1Q8WX77 278 aa14.01□□□□□ -0.17
PAX6-228ENST00000533333 DIDO1Q9BTC0 2240 aaKnown RBP14□□□□□ -0.17
PAX6-228ENST00000533333 KIF13BQ9NQT8 1826 aa14□□□□□ -0.17
PAX6-228ENST00000533333 A0A1W2PPM0 123 aa14□□□□□ -0.17
PAX6-228ENST00000533333 FOXE3Q13461 319 aa14□□□□□ -0.17
PAX6-228ENST00000533333 DEFB112Q30KQ8 113 aa14□□□□□ -0.17
PAX6-228ENST00000533333 Q8TCH9 128 aa14□□□□□ -0.17
PAX6-228ENST00000533333 ZC2HC1AQ96GY0 325 aa14□□□□□ -0.17
PAX6-228ENST00000533333 VPREB3Q9UKI3 123 aa14□□□□□ -0.17
PAX6-228ENST00000533333 C16orf74Q96GX8 76 aa13.99□□□□□ -0.17
PAX6-228ENST00000533333 TMEM14CQ9P0S9 112 aa13.99□□□□□ -0.17
PAX6-228ENST00000533333 K7EP13 123 aa13.99□□□□□ -0.17
PAX6-228ENST00000533333 GVINP1Q7Z2Y8 2422 aa13.99□□□□□ -0.17
PAX6-228ENST00000533333 CFC1BP0CG36 223 aa13.99□□□□□ -0.17
PAX6-228ENST00000533333 CFC1P0CG37 223 aa13.99□□□□□ -0.17
PAX6-228ENST00000533333 IGHV4-59P01825 116 aa13.98□□□□□ -0.17
PAX6-228ENST00000533333 Q6ZS49 121 aa13.98□□□□□ -0.17
PAX6-228ENST00000533333 ETV2O00321 342 aaPredicted RBP13.98□□□□□ -0.17
PAX6-228ENST00000533333 DUX4L9Q6RFH8 374 aaPredicted RBP13.98□□□□□ -0.17
PAX6-228ENST00000533333 Q6ZWC4 215 aa13.98□□□□□ -0.17
PAX6-228ENST00000533333 GPHB5Q86YW7 130 aa13.98□□□□□ -0.17
PAX6-228ENST00000533333 TPSG1Q9NRR2 321 aa13.98□□□□□ -0.17
PAX6-228ENST00000533333 SH2D6Q7Z4S9 175 aa13.98□□□□□ -0.17
PAX6-228ENST00000533333 PSMB8P28062 276 aa13.98□□□□□ -0.17
PAX6-228ENST00000533333 LTAP01374 205 aa13.98□□□□□ -0.17
PAX6-228ENST00000533333 K7EQD1 137 aa13.97□□□□□ -0.17
PAX6-228ENST00000533333 CASC2Q6XLA1 102 aa13.97□□□□□ -0.17
PAX6-228ENST00000533333 OPRPNQ99935 248 aaPredicted RBP13.97□□□□□ -0.17
PAX6-228ENST00000533333 LOXP28300 417 aaPredicted RBP13.97□□□□□ -0.17
PAX6-228ENST00000533333 ACYP1P07311 99 aa13.97□□□□□ -0.17
PAX6-228ENST00000533333 AMTNQ6UX39 209 aa13.97□□□□□ -0.17
PAX6-228ENST00000533333 IGKV4-1P06312 121 aa13.97□□□□□ -0.17
PAX6-228ENST00000533333 SPANXCQ9NY87 97 aa13.97□□□□□ -0.17
PAX6-228ENST00000533333 ZFP2Q6ZN57 461 aa13.96□□□□□ -0.17
PAX6-228ENST00000533333 KLHDC3Q9BQ90 382 aa13.96□□□□□ -0.17
PAX6-228ENST00000533333 IGKV3D-7A0A0C4DH55 119 aa13.96□□□□□ -0.17
PAX6-228ENST00000533333 SPATA25Q9BR10 227 aa13.96□□□□□ -0.17
PAX6-228ENST00000533333 SLURP1P55000 103 aa13.96□□□□□ -0.17
PAX6-228ENST00000533333 DKK2Q9UBU2 259 aa13.96□□□□□ -0.17
PAX6-228ENST00000533333 MYOFQ9NZM1 2061 aa13.96□□□□□ -0.17
PAX6-228ENST00000533333 H3BUA1 57 aa13.96□□□□□ -0.18
PAX6-228ENST00000533333 C17orf58Q2M2W7 97 aa13.96□□□□□ -0.18
PAX6-228ENST00000533333 C12orf74Q32Q52 190 aa13.96□□□□□ -0.18
PAX6-228ENST00000533333 SND1-IT1Q9HBX3 110 aa13.96□□□□□ -0.18
PAX6-228ENST00000533333 ABCA7Q8IZY2 2146 aa13.96□□□□□ -0.18
PAX6-228ENST00000533333 RNF183Q96D59 192 aa13.96□□□□□ -0.18
PAX6-228ENST00000533333 CACNA1DQ01668 2161 aa13.96□□□□□ -0.18
PAX6-228ENST00000533333 NDUFA1O15239 70 aa13.95□□□□□ -0.18
PAX6-228ENST00000533333 NDUFS7O75251 213 aa13.95□□□□□ -0.18
PAX6-228ENST00000533333 NDUFS6O75380 124 aaKnown RBP13.95□□□□□ -0.18
PAX6-228ENST00000533333 SMIM27A0A1W2PRY6 76 aa13.95□□□□□ -0.18
PAX6-228ENST00000533333 WIPF2Q8TF74 440 aaPredicted RBP13.95□□□□□ -0.18
PAX6-228ENST00000533333 POLR2AP24928 1970 aaKnown RBP13.95□□□□□ -0.18
PAX6-228ENST00000533333 UBR3Q6ZT12 1888 aa13.95□□□□□ -0.18
PAX6-228ENST00000533333 MUSTN1Q8IVN3 82 aa13.95□□□□□ -0.18
PAX6-228ENST00000533333 ASPHD1Q5U4P2 390 aa13.95□□□□□ -0.18
PAX6-228ENST00000533333 QRFPP83859 136 aa13.94□□□□□ -0.18
PAX6-228ENST00000533333 RNF138Q8WVD3 245 aa13.94□□□□□ -0.18
PAX6-228ENST00000533333 C20orf144Q9BQM9 153 aa13.94□□□□□ -0.18
PAX6-228ENST00000533333 COL4A1P02462 1669 aa13.94□□□□□ -0.18
PAX6-228ENST00000533333 CACNA1IQ9P0X4 2223 aa13.94□□□□□ -0.18
PAX6-228ENST00000533333 ZNF493Q6ZR52 646 aa13.94□□□□□ -0.18
PAX6-228ENST00000533333 SPTBN1Q01082 2364 aaKnown RBP13.93□□□□□ -0.18
PAX6-228ENST00000533333 B9D2Q9BPU9 175 aa13.93□□□□□ -0.18
PAX6-228ENST00000533333 IGLV3-9A0A075B6K5 115 aa13.93□□□□□ -0.18
PAX6-228ENST00000533333 MYO7BQ6PIF6 2116 aa13.93□□□□□ -0.18
PAX6-228ENST00000533333 HOXB4P17483 251 aaPredicted RBP13.92□□□□□ -0.18
PAX6-228ENST00000533333 V9GYV3 84 aa13.92□□□□□ -0.18
PAX6-228ENST00000533333 IGLL1P15814 213 aa13.92□□□□□ -0.18
PAX6-228ENST00000533333 LRCOL1A6NCL2 159 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms