RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 SLC25A16P16260 332 aa7.33□□□□□ -1.24
BDNF-216ENST00000532997 C12orf74Q32Q52 190 aa7.33□□□□□ -1.24
BDNF-216ENST00000532997 C1orf122Q6ZSJ8 110 aa7.33□□□□□ -1.24
BDNF-216ENST00000532997 JMJD8Q96S16 334 aa7.33□□□□□ -1.24
BDNF-216ENST00000532997 MSRB1Q9NZV6 116 aa7.33□□□□□ -1.24
BDNF-216ENST00000532997 MYMXA0A1B0GTQ4 84 aa7.33□□□□□ -1.24
BDNF-216ENST00000532997 TEX48A0A1B0GUV7 120 aa7.33□□□□□ -1.24
BDNF-216ENST00000532997 IGLL5B9A064 214 aa7.33□□□□□ -1.24
BDNF-216ENST00000532997 LGALS3P17931 250 aaKnown RBP7.33□□□□□ -1.24
BDNF-216ENST00000532997 K7ERJ3 54 aa7.32□□□□□ -1.24
BDNF-216ENST00000532997 CTSGP08311 255 aa7.32□□□□□ -1.24
BDNF-216ENST00000532997 HLA-DMBP28068 263 aa7.32□□□□□ -1.24
BDNF-216ENST00000532997 FOXI2Q6ZQN5 318 aa7.32□□□□□ -1.24
BDNF-216ENST00000532997 LENEPQ9Y5L5 61 aa7.32□□□□□ -1.24
BDNF-216ENST00000532997 TSSC4Q9Y5U2 329 aaPredicted RBP7.32□□□□□ -1.24
BDNF-216ENST00000532997 SPTBN2O15020 2390 aa7.32□□□□□ -1.24
BDNF-216ENST00000532997 SPTBN1Q01082 2364 aaKnown RBP7.32□□□□□ -1.24
BDNF-216ENST00000532997 GAGE12HA6NDE8 117 aa7.32□□□□□ -1.24
BDNF-216ENST00000532997 NDUFS8O00217 210 aa7.32□□□□□ -1.24
BDNF-216ENST00000532997 SUMO2P61956 95 aaKnown RBP7.32□□□□□ -1.24
BDNF-216ENST00000532997 MRGPRG-AS1Q2M3A8 158 aa7.32□□□□□ -1.24
BDNF-216ENST00000532997 COX8CQ7Z4L0 72 aa7.32□□□□□ -1.24
BDNF-216ENST00000532997 RNF182Q8N6D2 247 aa7.32□□□□□ -1.24
BDNF-216ENST00000532997 C20orf78Q9BR46 151 aa7.32□□□□□ -1.24
BDNF-216ENST00000532997 LY6LH3BQJ8 138 aa7.32□□□□□ -1.24
BDNF-216ENST00000532997 TRGV3P03979 118 aa7.32□□□□□ -1.24
BDNF-216ENST00000532997 PAX8Q06710 450 aa7.32□□□□□ -1.24
BDNF-216ENST00000532997 RRN3P1Q2M238 152 aa7.32□□□□□ -1.24
BDNF-216ENST00000532997 SYT8Q8NBV8 401 aa7.32□□□□□ -1.24
BDNF-216ENST00000532997 TM2D2Q9BX73 214 aa7.32□□□□□ -1.24
BDNF-216ENST00000532997 XIRP2A4UGR9 3374 aa7.31□□□□□ -1.24
BDNF-216ENST00000532997 MRPS12O15235 138 aaKnown RBP7.31□□□□□ -1.24
BDNF-216ENST00000532997 FOXC1Q12948 553 aa7.31□□□□□ -1.24
BDNF-216ENST00000532997 NEGR1Q7Z3B1 354 aa7.31□□□□□ -1.24
BDNF-216ENST00000532997 CFHR4Q92496 578 aa7.31□□□□□ -1.24
BDNF-216ENST00000532997 AGPAT4-IT1Q9H0P7 198 aa7.31□□□□□ -1.24
BDNF-216ENST00000532997 TRAV12-1A0A0B4J245 112 aa7.31□□□□□ -1.24
BDNF-216ENST00000532997 ETDBQ3ZM63 59 aa7.31□□□□□ -1.24
BDNF-216ENST00000532997 FAM159AQ6UWV7 190 aa7.31□□□□□ -1.24
BDNF-216ENST00000532997 PGPEP1Q9NXJ5 209 aa7.31□□□□□ -1.24
BDNF-216ENST00000532997 A0A096LNJ9 63 aa7.31□□□□□ -1.24
BDNF-216ENST00000532997 ZNF80P51504 273 aaPredicted RBP7.31□□□□□ -1.24
BDNF-216ENST00000532997 C8orf86Q6ZUL3 223 aa7.31□□□□□ -1.24
BDNF-216ENST00000532997 RIF1Q5UIP0 2472 aaKnown RBP7.3□□□□□ -1.24
BDNF-216ENST00000532997 AZU1P20160 251 aa7.3□□□□□ -1.24
BDNF-216ENST00000532997 LY6G5BQ8NDX9 201 aa7.3□□□□□ -1.24
BDNF-216ENST00000532997 CNFNQ9BYD5 112 aa7.3□□□□□ -1.24
BDNF-216ENST00000532997 PRSS47A8MTI9 375 aa7.3□□□□□ -1.24
BDNF-216ENST00000532997 BUB3O43684 328 aa7.3□□□□□ -1.24
BDNF-216ENST00000532997 GATA1P15976 413 aaPredicted RBP7.3□□□□□ -1.24
BDNF-216ENST00000532997 TMEM170BQ5T4T1 132 aa7.3□□□□□ -1.24
BDNF-216ENST00000532997 C2orf66Q6UXQ4 117 aa7.3□□□□□ -1.24
BDNF-216ENST00000532997 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.3□□□□□ -1.24
BDNF-216ENST00000532997 ZNF418Q8TF45 676 aaPredicted RBP7.3□□□□□ -1.24
BDNF-216ENST00000532997 RNF185Q96GF1 192 aa7.3□□□□□ -1.24
BDNF-216ENST00000532997 H3BMG7 143 aa7.29□□□□□ -1.24
BDNF-216ENST00000532997 FAM223BA6NKX1 122 aa7.29□□□□□ -1.24
BDNF-216ENST00000532997 TMEM262E9PQX1 116 aa7.29□□□□□ -1.24
BDNF-216ENST00000532997 ATP6V0E1O15342 81 aa7.29□□□□□ -1.24
BDNF-216ENST00000532997 RNASE4P34096 147 aaKnown RBP7.29□□□□□ -1.24
BDNF-216ENST00000532997 EFNA4P52798 201 aa7.29□□□□□ -1.24
BDNF-216ENST00000532997 FAM223AQ8IWN6 122 aa7.29□□□□□ -1.24
BDNF-216ENST00000532997 IGKV3-7A0A075B6H7 116 aa7.29□□□□□ -1.24
BDNF-216ENST00000532997 IGHV7-81A0A0B4J1V7 117 aa7.29□□□□□ -1.24
BDNF-216ENST00000532997 A8MWV9 139 aa7.29□□□□□ -1.24
BDNF-216ENST00000532997 E9PLD3 99 aa7.29□□□□□ -1.24
BDNF-216ENST00000532997 UBTD1Q9HAC8 227 aa7.29□□□□□ -1.24
BDNF-216ENST00000532997 TRAV26-2A0A0B4J265 109 aa7.28□□□□□ -1.24
BDNF-216ENST00000532997 TRAV41A0A0B4J266 112 aa7.28□□□□□ -1.24
BDNF-216ENST00000532997 UBE2E1P51965 193 aa7.28□□□□□ -1.24
BDNF-216ENST00000532997 UCNP55089 124 aa7.28□□□□□ -1.24
BDNF-216ENST00000532997 PRADC1Q9BSG0 188 aa7.28□□□□□ -1.24
BDNF-216ENST00000532997 TTTY13Q9BZ97 58 aa7.28□□□□□ -1.24
BDNF-216ENST00000532997 PF4V1P10720 104 aa7.28□□□□□ -1.24
BDNF-216ENST00000532997 C14orf178Q8N769 122 aaPredicted RBP7.28□□□□□ -1.24
BDNF-216ENST00000532997 MOB4Q9Y3A3 225 aa7.28□□□□□ -1.24
BDNF-216ENST00000532997 TRBV20-1A0A075B6N2 111 aa7.28□□□□□ -1.24
BDNF-216ENST00000532997 FCN3O75636 299 aa7.28□□□□□ -1.24
BDNF-216ENST00000532997 C9orf47Q6ZRZ4 202 aa7.28□□□□□ -1.24
BDNF-216ENST00000532997 IGKV2D-26A0A0A0MRZ7 120 aa7.27□□□□□ -1.25
BDNF-216ENST00000532997 ODF3BA8MYP8 253 aa7.27□□□□□ -1.25
BDNF-216ENST00000532997 PRAC2D3DTV9 90 aa7.27□□□□□ -1.25
BDNF-216ENST00000532997 VCYO14598 125 aa7.27□□□□□ -1.25
BDNF-216ENST00000532997 CKS1BP61024 79 aa7.27□□□□□ -1.25
BDNF-216ENST00000532997 COL27A1Q8IZC6 1860 aaPredicted RBP7.27□□□□□ -1.25
BDNF-216ENST00000532997 ANKHD1Q8IWZ3 2542 aaKnown RBP7.27□□□□□ -1.25
BDNF-216ENST00000532997 LY6HO94772 140 aa7.27□□□□□ -1.25
BDNF-216ENST00000532997 ATP6V0BQ99437 205 aa7.27□□□□□ -1.25
BDNF-216ENST00000532997 NDPQ00604 133 aa7.27□□□□□ -1.25
BDNF-216ENST00000532997 ZMAT4Q9H898 229 aa7.27□□□□□ -1.25
BDNF-216ENST00000532997 OTOGLQ3ZCN5 2332 aa7.26□□□□□ -1.25
BDNF-216ENST00000532997 COX6CP09669 75 aa7.26□□□□□ -1.25
BDNF-216ENST00000532997 WFDC2Q14508 124 aa7.26□□□□□ -1.25
BDNF-216ENST00000532997 TMEM141Q96I45 108 aa7.26□□□□□ -1.25
BDNF-216ENST00000532997 APC2O95996 2303 aa7.26□□□□□ -1.25
BDNF-216ENST00000532997 IGHV1-69DA0A0B4J2H0 117 aa7.26□□□□□ -1.25
BDNF-216ENST00000532997 Q71RC1 249 aaPredicted RBP7.26□□□□□ -1.25
BDNF-216ENST00000532997 IGKV3D-20A0A0C4DH25 116 aa7.26□□□□□ -1.25
BDNF-216ENST00000532997 LINC01619G3V211 115 aa7.26□□□□□ -1.25
BDNF-216ENST00000532997 FOXE3Q13461 319 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms