RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 HBE1P02100 147 aa4.2□□□□□ -1.74
HMGB1P42-201ENST00000532126 SNRPCP09234 159 aaKnown RBP4.2□□□□□ -1.74
HMGB1P42-201ENST00000532126 GIPP09681 153 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P42-201ENST00000532126 HLA-DRB4P13762 266 aa4.2□□□□□ -1.74
HMGB1P42-201ENST00000532126 HOXA5P20719 270 aa4.2□□□□□ -1.74
HMGB1P42-201ENST00000532126 LEPP41159 167 aa4.2□□□□□ -1.74
HMGB1P42-201ENST00000532126 TAS2R60P59551 318 aa4.2□□□□□ -1.74
HMGB1P42-201ENST00000532126 DEFB1P60022 68 aa4.2□□□□□ -1.74
HMGB1P42-201ENST00000532126 GDF5OSQ5U4N7 250 aa4.2□□□□□ -1.74
HMGB1P42-201ENST00000532126 MORN5Q5VZ52 161 aa4.2□□□□□ -1.74
HMGB1P42-201ENST00000532126 SPATA31B1PQ5VZV4 182 aa4.2□□□□□ -1.74
HMGB1P42-201ENST00000532126 LINC00336Q6ZUF6 198 aa4.2□□□□□ -1.74
HMGB1P42-201ENST00000532126 BPIFA4PQ86YQ2 179 aa4.2□□□□□ -1.74
HMGB1P42-201ENST00000532126 OR4B1Q8NGF8 309 aa4.2□□□□□ -1.74
HMGB1P42-201ENST00000532126 OR11H2Q8NH07 326 aa4.2□□□□□ -1.74
HMGB1P42-201ENST00000532126 SCGB1C1Q8TD33 95 aa4.2□□□□□ -1.74
HMGB1P42-201ENST00000532126 ASB13Q8WXK3 278 aa4.2□□□□□ -1.74
HMGB1P42-201ENST00000532126 C20orf173Q96LM9 149 aa4.2□□□□□ -1.74
HMGB1P42-201ENST00000532126 RARRES2Q99969 163 aa4.2□□□□□ -1.74
HMGB1P42-201ENST00000532126 C1QTNF4Q9BXJ3 329 aa4.2□□□□□ -1.74
HMGB1P42-201ENST00000532126 SMIM3Q9BZL3 60 aa4.2□□□□□ -1.74
HMGB1P42-201ENST00000532126 WDR61Q9GZS3 305 aaKnown RBP4.2□□□□□ -1.74
HMGB1P42-201ENST00000532126 HSPB11Q9Y547 144 aa4.2□□□□□ -1.74
HMGB1P42-201ENST00000532126 HLA-DRB4X5D2U9 266 aa4.2□□□□□ -1.74
HMGB1P42-201ENST00000532126 TRAV8-2A0A0B4J237 113 aa4.19□□□□□ -1.74
HMGB1P42-201ENST00000532126 TRAV5A0A0B4J249 113 aa4.19□□□□□ -1.74
HMGB1P42-201ENST00000532126 A0A0J9YWU9 116 aa4.19□□□□□ -1.74
HMGB1P42-201ENST00000532126 A0A0J9YX75 114 aa4.19□□□□□ -1.74
HMGB1P42-201ENST00000532126 F6UB75 175 aa4.19□□□□□ -1.74
HMGB1P42-201ENST00000532126 MRPS12O15235 138 aaKnown RBP4.19□□□□□ -1.74
HMGB1P42-201ENST00000532126 GIG44P09565 113 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P42-201ENST00000532126 CXCL2P19875 107 aa4.19□□□□□ -1.74
HMGB1P42-201ENST00000532126 GUK1Q16774 197 aa4.19□□□□□ -1.74
HMGB1P42-201ENST00000532126 KRTAP19-4Q3LI73 84 aa4.19□□□□□ -1.74
HMGB1P42-201ENST00000532126 GCSAMLQ5JQS6 135 aa4.19□□□□□ -1.74
HMGB1P42-201ENST00000532126 CASC10Q5T4H9 136 aa4.19□□□□□ -1.74
HMGB1P42-201ENST00000532126 FAM78BQ5VT40 261 aa4.19□□□□□ -1.74
HMGB1P42-201ENST00000532126 IGFL4Q6B9Z1 124 aa4.19□□□□□ -1.74
HMGB1P42-201ENST00000532126 ZFAND6Q6FIF0 208 aa4.19□□□□□ -1.74
HMGB1P42-201ENST00000532126 LCN15Q6UWW0 184 aa4.19□□□□□ -1.74
HMGB1P42-201ENST00000532126 AKAP14Q86UN6 197 aa4.19□□□□□ -1.74
HMGB1P42-201ENST00000532126 RNF182Q8N6D2 247 aa4.19□□□□□ -1.74
HMGB1P42-201ENST00000532126 TMED6Q8WW62 240 aa4.19□□□□□ -1.74
HMGB1P42-201ENST00000532126 BAALCQ8WXS3 180 aa4.19□□□□□ -1.74
HMGB1P42-201ENST00000532126 KRTAP3-1Q9BYR8 98 aa4.19□□□□□ -1.74
HMGB1P42-201ENST00000532126 XCL2Q9UBD3 114 aa4.19□□□□□ -1.74
HMGB1P42-201ENST00000532126 COL7A1Q02388 2944 aa4.19□□□□□ -1.74
HMGB1P42-201ENST00000532126 FXYD6-FXYD2A0A087WZ82 144 aa4.18□□□□□ -1.74
HMGB1P42-201ENST00000532126 FAM231BA6NCW3 169 aa4.18□□□□□ -1.74
HMGB1P42-201ENST00000532126 LYRM9A8MSI8 78 aa4.18□□□□□ -1.74
HMGB1P42-201ENST00000532126 H3BQ15 152 aa4.18□□□□□ -1.74
HMGB1P42-201ENST00000532126 DUSP14O95147 198 aaKnown RBP4.18□□□□□ -1.74
HMGB1P42-201ENST00000532126 IGLC2P0DOY2 106 aa4.18□□□□□ -1.74
HMGB1P42-201ENST00000532126 HLA-DMBP28068 263 aa4.18□□□□□ -1.74
HMGB1P42-201ENST00000532126 FXYD7P58549 80 aa4.18□□□□□ -1.74
HMGB1P42-201ENST00000532126 PSG9Q00887 426 aa4.18□□□□□ -1.74
HMGB1P42-201ENST00000532126 Q5BKY6 102 aa4.18□□□□□ -1.74
HMGB1P42-201ENST00000532126 BOD1L2Q8IYS8 172 aa4.18□□□□□ -1.74
HMGB1P42-201ENST00000532126 CSNK1G2-AS1Q8NCQ2 148 aa4.18□□□□□ -1.74
HMGB1P42-201ENST00000532126 OR2T35Q8NGX2 323 aa4.18□□□□□ -1.74
HMGB1P42-201ENST00000532126 RPUSD4Q96CM3 377 aaKnown RBP4.18□□□□□ -1.74
HMGB1P42-201ENST00000532126 ST6GAL2Q96JF0 529 aa4.18□□□□□ -1.74
HMGB1P42-201ENST00000532126 AQP10Q96PS8 301 aa4.18□□□□□ -1.74
HMGB1P42-201ENST00000532126 SLC50A1Q9BRV3 221 aa4.18□□□□□ -1.74
HMGB1P42-201ENST00000532126 PARD6GQ9BYG4 376 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P42-201ENST00000532126 WFDC1Q9HC57 220 aa4.18□□□□□ -1.74
HMGB1P42-201ENST00000532126 ZNF331Q9NQX6 463 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P42-201ENST00000532126 TMEM14CQ9P0S9 112 aa4.18□□□□□ -1.74
HMGB1P42-201ENST00000532126 HUWE1Q7Z6Z7 4374 aaKnown RBP4.18□□□□□ -1.74
HMGB1P42-201ENST00000532126 STAB2Q8WWQ8 2551 aa4.17□□□□□ -1.74
HMGB1P42-201ENST00000532126 TRBV19A0A075B6N1 114 aa4.17□□□□□ -1.74
HMGB1P42-201ENST00000532126 ZNF705EA8MWA4 302 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P42-201ENST00000532126 SLC17A3O00476 420 aa4.17□□□□□ -1.74
HMGB1P42-201ENST00000532126 DEFB4AO15263 64 aa4.17□□□□□ -1.74
HMGB1P42-201ENST00000532126 GATCO43716 136 aaKnown RBP4.17□□□□□ -1.74
HMGB1P42-201ENST00000532126 PRSS1P07477 247 aa4.17□□□□□ -1.74
HMGB1P42-201ENST00000532126 ZNF705DP0CH99 300 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P42-201ENST00000532126 ZNF705BP0CI00 300 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P42-201ENST00000532126 PYYP10082 97 aa4.17□□□□□ -1.74
HMGB1P42-201ENST00000532126 HIST1H1EP10412 219 aaKnown RBP4.17□□□□□ -1.74
HMGB1P42-201ENST00000532126 MIFP14174 115 aa4.17□□□□□ -1.74
HMGB1P42-201ENST00000532126 RHOBP62745 196 aa4.17□□□□□ -1.74
HMGB1P42-201ENST00000532126 HIST1H1AQ02539 215 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P42-201ENST00000532126 ZNF266Q14584 549 aa4.17□□□□□ -1.74
HMGB1P42-201ENST00000532126 FFAR4Q5NUL3 377 aa4.17□□□□□ -1.74
HMGB1P42-201ENST00000532126 MIR17HGQ75NE6 70 aa4.17□□□□□ -1.74
HMGB1P42-201ENST00000532126 OR8A1Q8NGG7 326 aa4.17□□□□□ -1.74
HMGB1P42-201ENST00000532126 OR10J6PQ8NGY7 276 aa4.17□□□□□ -1.74
HMGB1P42-201ENST00000532126 C11orf45Q8TAV5 145 aa4.17□□□□□ -1.74
HMGB1P42-201ENST00000532126 SLC25A2Q9BXI2 301 aa4.17□□□□□ -1.74
HMGB1P42-201ENST00000532126 MRPL32Q9BYC8 188 aaKnown RBP4.17□□□□□ -1.74
HMGB1P42-201ENST00000532126 SLC35B3Q9H1N7 401 aa4.17□□□□□ -1.74
HMGB1P42-201ENST00000532126 C11orf68Q9H3H3 251 aaKnown RBP4.17□□□□□ -1.74
HMGB1P42-201ENST00000532126 ZNF586Q9NXT0 402 aa4.17□□□□□ -1.74
HMGB1P42-201ENST00000532126 FUT9Q9Y231 359 aa4.17□□□□□ -1.74
HMGB1P42-201ENST00000532126 TIMM9Q9Y5J7 89 aa4.17□□□□□ -1.74
HMGB1P42-201ENST00000532126 TENM3Q9P273 2699 aa4.16□□□□□ -1.74
HMGB1P42-201ENST00000532126 IGHV3OR16-12A0A075B7B8 117 aa4.16□□□□□ -1.74
HMGB1P42-201ENST00000532126 SMIM9A6NGZ8 99 aa4.16□□□□□ -1.74
HMGB1P42-201ENST00000532126 A8MTW9 85 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms