RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 RGS13O14921 159 aa6.03□□□□□ -1.44
USF1-210ENST00000531842 PAX4O43316 350 aa6.03□□□□□ -1.44
USF1-210ENST00000531842 SSNA1O43805 119 aa6.03□□□□□ -1.44
USF1-210ENST00000531842 ZNF253O75346 499 aa6.03□□□□□ -1.44
USF1-210ENST00000531842 EIF3GO75821 320 aaKnown RBP eCLIP6.03□□□□□ -1.44
USF1-210ENST00000531842 PYYP10082 97 aa6.03□□□□□ -1.44
USF1-210ENST00000531842 HBG1P69891 147 aa6.03□□□□□ -1.44
USF1-210ENST00000531842 HBG2P69892 147 aa6.03□□□□□ -1.44
USF1-210ENST00000531842 CD300CQ08708 224 aa6.03□□□□□ -1.44
USF1-210ENST00000531842 BTN1A1Q13410 526 aa6.03□□□□□ -1.44
USF1-210ENST00000531842 LYPD5Q6UWN5 251 aa6.03□□□□□ -1.44
USF1-210ENST00000531842 EIF4E3Q8N5X7 224 aaKnown RBP6.03□□□□□ -1.44
USF1-210ENST00000531842 MRPL53Q96EL3 112 aaKnown RBP6.03□□□□□ -1.44
USF1-210ENST00000531842 LINC00477Q96M19 166 aa6.03□□□□□ -1.44
USF1-210ENST00000531842 SLC25A2Q9BXI2 301 aa6.03□□□□□ -1.44
USF1-210ENST00000531842 WDR61Q9GZS3 305 aaKnown RBP6.03□□□□□ -1.44
USF1-210ENST00000531842 AGPAT4-IT1Q9H0P7 198 aa6.03□□□□□ -1.44
USF1-210ENST00000531842 AAMDCQ9H7C9 122 aa6.03□□□□□ -1.44
USF1-210ENST00000531842 MBD2Q9UBB5 411 aa6.03□□□□□ -1.44
USF1-210ENST00000531842 PRELID1Q9Y255 219 aa6.03□□□□□ -1.44
USF1-210ENST00000531842 HSPB11Q9Y547 144 aa6.03□□□□□ -1.44
USF1-210ENST00000531842 G3V3Q6 166 aa6.02□□□□□ -1.45
USF1-210ENST00000531842 MPDU1O75352 247 aa6.02□□□□□ -1.45
USF1-210ENST00000531842 PTTG1O95997 202 aa6.02□□□□□ -1.45
USF1-210ENST00000531842 HIST1H1EP10412 219 aaKnown RBP6.02□□□□□ -1.45
USF1-210ENST00000531842 CYCSP99999 105 aaKnown RBP6.02□□□□□ -1.45
USF1-210ENST00000531842 LINC01620Q4KN68 170 aa6.02□□□□□ -1.45
USF1-210ENST00000531842 TMEM78Q5T7P6 136 aa6.02□□□□□ -1.45
USF1-210ENST00000531842 FAM122CQ6P4D5 195 aa6.02□□□□□ -1.45
USF1-210ENST00000531842 MIR17HGQ75NE6 70 aa6.02□□□□□ -1.45
USF1-210ENST00000531842 LINC00528Q8N1L1 170 aa6.02□□□□□ -1.45
USF1-210ENST00000531842 EXOC3-AS1Q8N2X6 119 aa6.02□□□□□ -1.45
USF1-210ENST00000531842 C11orf72Q8NBR9 251 aa6.02□□□□□ -1.45
USF1-210ENST00000531842 C8orf49Q96NF6 230 aa6.02□□□□□ -1.45
USF1-210ENST00000531842 ARPC5LQ9BPX5 153 aa6.02□□□□□ -1.45
USF1-210ENST00000531842 MRPL16Q9NX20 251 aaKnown RBP6.02□□□□□ -1.45
USF1-210ENST00000531842 MSRB1Q9NZV6 116 aa6.02□□□□□ -1.45
USF1-210ENST00000531842 TMEM14CQ9P0S9 112 aa6.02□□□□□ -1.45
USF1-210ENST00000531842 TP53TG3Q9ULZ0 132 aa6.02□□□□□ -1.45
USF1-210ENST00000531842 ICOSQ9Y6W8 199 aa6.02□□□□□ -1.45
USF1-210ENST00000531842 RNF213Q63HN8 5207 aa6.02□□□□□ -1.45
USF1-210ENST00000531842 LRCOL1A6NCL2 159 aa6.01□□□□□ -1.45
USF1-210ENST00000531842 KLLNB2CW77 178 aa6.01□□□□□ -1.45
USF1-210ENST00000531842 ZNF324O75467 553 aaPredicted RBP6.01□□□□□ -1.45
USF1-210ENST00000531842 RPL12P30050 165 aaKnown RBP6.01□□□□□ -1.45
USF1-210ENST00000531842 PDE6HQ13956 83 aa6.01□□□□□ -1.45
USF1-210ENST00000531842 WFDC2Q14508 124 aa6.01□□□□□ -1.45
USF1-210ENST00000531842 ANXA2RQ3ZCQ2 193 aa6.01□□□□□ -1.45
USF1-210ENST00000531842 FXYD5Q96DB9 178 aa6.01□□□□□ -1.45
USF1-210ENST00000531842 ATP5SQ99766 215 aa6.01□□□□□ -1.45
USF1-210ENST00000531842 SMIM3Q9BZL3 60 aa6.01□□□□□ -1.45
USF1-210ENST00000531842 SLC25A31Q9H0C2 315 aa6.01□□□□□ -1.45
USF1-210ENST00000531842 PLA2G2DQ9UNK4 145 aa6.01□□□□□ -1.45
USF1-210ENST00000531842 HHLA3Q9XRX5 114 aa6.01□□□□□ -1.45
USF1-210ENST00000531842 IGHV1OR15-1A0A075B7D0 117 aa6□□□□□ -1.45
USF1-210ENST00000531842 TRAV9-2A0A087WT02 112 aa6□□□□□ -1.45
USF1-210ENST00000531842 IGKV2-40A0A087WW87 121 aaPredicted RBP6□□□□□ -1.45
USF1-210ENST00000531842 SPINK4O60575 86 aa6□□□□□ -1.45
USF1-210ENST00000531842 IGKV2D-40P01614 121 aaPredicted RBP6□□□□□ -1.45
USF1-210ENST00000531842 SLAQ13239 276 aa6□□□□□ -1.45
USF1-210ENST00000531842 ST6GAL2Q96JF0 529 aa6□□□□□ -1.45
USF1-210ENST00000531842 FAM19A4Q96LR4 140 aa6□□□□□ -1.45
USF1-210ENST00000531842 VGLL1Q99990 258 aa6□□□□□ -1.45
USF1-210ENST00000531842 LINC00467Q9BRT7 94 aa6□□□□□ -1.45
USF1-210ENST00000531842 TMEM70Q9BUB7 260 aa6□□□□□ -1.45
USF1-210ENST00000531842 PRO0255Q9UI72 69 aa6□□□□□ -1.45
USF1-210ENST00000531842 LY96Q9Y6Y9 160 aa6□□□□□ -1.45
USF1-210ENST00000531842 TRGV4A0A0C4DH28 118 aa5.99□□□□□ -1.45
USF1-210ENST00000531842 NMBP08949 121 aa5.99□□□□□ -1.45
USF1-210ENST00000531842 NBEAP1P0C6P0 100 aa5.99□□□□□ -1.45
USF1-210ENST00000531842 SFTA3P0C7M3 94 aa5.99□□□□□ -1.45
USF1-210ENST00000531842 CRISP2P16562 243 aa5.99□□□□□ -1.45
USF1-210ENST00000531842 CSN1S1P47710 185 aa5.99□□□□□ -1.45
USF1-210ENST00000531842 CRYBA4P53673 196 aa5.99□□□□□ -1.45
USF1-210ENST00000531842 TCL1AP56279 114 aa5.99□□□□□ -1.45
USF1-210ENST00000531842 KRTAP10-4P60372 401 aaPredicted RBP5.99□□□□□ -1.45
USF1-210ENST00000531842 FHL2Q14192 279 aa5.99□□□□□ -1.45
USF1-210ENST00000531842 MRPL23Q16540 153 aaKnown RBP5.99□□□□□ -1.45
USF1-210ENST00000531842 IBA57Q5T440 356 aaKnown RBP5.99□□□□□ -1.45
USF1-210ENST00000531842 PRR9Q5T870 116 aa5.99□□□□□ -1.45
USF1-210ENST00000531842 SERTAD4-AS1Q5TG53 156 aa5.99□□□□□ -1.45
USF1-210ENST00000531842 C9orf47Q6ZRZ4 202 aa5.99□□□□□ -1.45
USF1-210ENST00000531842 NFE4Q86UQ8 179 aa5.99□□□□□ -1.45
USF1-210ENST00000531842 PCNPQ8WW12 178 aaKnown RBP5.99□□□□□ -1.45
USF1-210ENST00000531842 Q9HAA7 133 aa5.99□□□□□ -1.45
USF1-210ENST00000531842 LOC100131303A0A0U1RQF7 123 aa5.98□□□□□ -1.45
USF1-210ENST00000531842 RNF222A6NCQ9 220 aa5.98□□□□□ -1.45
USF1-210ENST00000531842 LECT2O14960 151 aa5.98□□□□□ -1.45
USF1-210ENST00000531842 CRYGDP07320 174 aa5.98□□□□□ -1.45
USF1-210ENST00000531842 OR10J4P0C629 311 aa5.98□□□□□ -1.45
USF1-210ENST00000531842 ZNF138P52744 262 aa5.98□□□□□ -1.45
USF1-210ENST00000531842 RANP62826 216 aaKnown RBP5.98□□□□□ -1.45
USF1-210ENST00000531842 ZNF415Q09FC8 603 aa5.98□□□□□ -1.45
USF1-210ENST00000531842 MUC21Q5SSG8 566 aa5.98□□□□□ -1.45
USF1-210ENST00000531842 NEGR1Q7Z3B1 354 aa5.98□□□□□ -1.45
USF1-210ENST00000531842 SYT8Q8NBV8 401 aa5.98□□□□□ -1.45
USF1-210ENST00000531842 Q8TAT8 98 aa5.98□□□□□ -1.45
USF1-210ENST00000531842 PHYHIPLQ96FC7 376 aa5.98□□□□□ -1.45
USF1-210ENST00000531842 PAXXQ9BUH6 204 aa5.98□□□□□ -1.45
USF1-210ENST00000531842 OR51M1Q9H341 326 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms