RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 APOBP04114 4563 aaKnown RBP13.44□□□□□ -0.26
UBXN1-212ENST00000531625 IGKV2-40A0A087WW87 121 aaPredicted RBP13.43□□□□□ -0.26
UBXN1-212ENST00000531625 C16orf90A8MZG2 172 aa13.43□□□□□ -0.26
UBXN1-212ENST00000531625 IGKV2D-40P01614 121 aaPredicted RBP13.43□□□□□ -0.26
UBXN1-212ENST00000531625 DAD1P61803 113 aa13.43□□□□□ -0.26
UBXN1-212ENST00000531625 RRN3P1Q2M238 152 aa13.43□□□□□ -0.26
UBXN1-212ENST00000531625 PPP1R14DQ9NXH3 145 aa13.43□□□□□ -0.26
UBXN1-212ENST00000531625 RPH3ALQ9UNE2 315 aa13.43□□□□□ -0.26
UBXN1-212ENST00000531625 TEX46H3BTG2 121 aa13.42□□□□□ -0.26
UBXN1-212ENST00000531625 SLC25A5P05141 298 aaKnown RBP13.42□□□□□ -0.26
UBXN1-212ENST00000531625 TNP2Q05952 138 aa13.42□□□□□ -0.26
UBXN1-212ENST00000531625 RXFP4Q8TDU9 374 aa13.42□□□□□ -0.26
UBXN1-212ENST00000531625 A0A1W2PRE2 83 aa13.41□□□□□ -0.26
UBXN1-212ENST00000531625 A8MTW9 85 aa13.41□□□□□ -0.26
UBXN1-212ENST00000531625 GGTLC3B5MD39 225 aa13.41□□□□□ -0.26
UBXN1-212ENST00000531625 SUMO1P63165 101 aaKnown RBP13.41□□□□□ -0.26
UBXN1-212ENST00000531625 ERCC8Q13216 396 aa13.41□□□□□ -0.26
UBXN1-212ENST00000531625 FAM74A7A6NL05 159 aa13.4□□□□□ -0.26
UBXN1-212ENST00000531625 DIRC3C9JPN6 131 aa13.4□□□□□ -0.26
UBXN1-212ENST00000531625 NPIPB6E9PJ23 425 aa13.4□□□□□ -0.26
UBXN1-212ENST00000531625 GNG5P63218 68 aa13.4□□□□□ -0.26
UBXN1-212ENST00000531625 AMTNQ6UX39 209 aa13.4□□□□□ -0.26
UBXN1-212ENST00000531625 TRAV1-1A0A0B4J248 108 aa13.39□□□□□ -0.27
UBXN1-212ENST00000531625 NBDYA0A0U1RRE5 68 aa13.39□□□□□ -0.27
UBXN1-212ENST00000531625 CCL20P78556 96 aa13.39□□□□□ -0.27
UBXN1-212ENST00000531625 SPINK13Q1W4C9 94 aa13.39□□□□□ -0.27
UBXN1-212ENST00000531625 CST9LP1Q5W188 147 aa13.39□□□□□ -0.27
UBXN1-212ENST00000531625 MAPKAPK5-AS1Q8N8E1 139 aa13.39□□□□□ -0.27
UBXN1-212ENST00000531625 C5orf17Q8NAS9 161 aa13.39□□□□□ -0.27
UBXN1-212ENST00000531625 IGF2BP2-AS1Q96M15 143 aa13.39□□□□□ -0.27
UBXN1-212ENST00000531625 VGLL1Q99990 258 aa13.39□□□□□ -0.27
UBXN1-212ENST00000531625 ATG101Q9BSB4 218 aa13.39□□□□□ -0.27
UBXN1-212ENST00000531625 LYRM9A8MSI8 78 aa13.38□□□□□ -0.27
UBXN1-212ENST00000531625 M0R2Z0 102 aa13.38□□□□□ -0.27
UBXN1-212ENST00000531625 PAGE4O60829 102 aa13.38□□□□□ -0.27
UBXN1-212ENST00000531625 IFNA7P01567 189 aa13.38□□□□□ -0.27
UBXN1-212ENST00000531625 PPT1P50897 306 aa13.38□□□□□ -0.27
UBXN1-212ENST00000531625 BLOC1S1P78537 153 aa13.38□□□□□ -0.27
UBXN1-212ENST00000531625 TMEM78Q5T7P6 136 aa13.38□□□□□ -0.27
UBXN1-212ENST00000531625 GOLT1AQ6ZVE7 132 aa13.38□□□□□ -0.27
UBXN1-212ENST00000531625 C6orf223Q8N319 242 aa13.38□□□□□ -0.27
UBXN1-212ENST00000531625 ZNRF2Q8NHG8 242 aa13.38□□□□□ -0.27
UBXN1-212ENST00000531625 NKX6-2Q9C056 277 aaPredicted RBP13.38□□□□□ -0.27
UBXN1-212ENST00000531625 AGPAT4-IT1Q9H0P7 198 aa13.38□□□□□ -0.27
UBXN1-212ENST00000531625 GNG13Q9P2W3 67 aa13.38□□□□□ -0.27
UBXN1-212ENST00000531625 CT45A10P0DMU9 189 aa13.37□□□□□ -0.27
UBXN1-212ENST00000531625 TEX261Q6UWH6 196 aa13.37□□□□□ -0.27
UBXN1-212ENST00000531625 C9orf47Q6ZRZ4 202 aa13.37□□□□□ -0.27
UBXN1-212ENST00000531625 ARL6IP6Q8N6S5 226 aa13.37□□□□□ -0.27
UBXN1-212ENST00000531625 LINC00477Q96M19 166 aa13.37□□□□□ -0.27
UBXN1-212ENST00000531625 TMEM208Q9BTX3 173 aa13.37□□□□□ -0.27
UBXN1-212ENST00000531625 EPDR1Q9UM22 224 aa13.37□□□□□ -0.27
UBXN1-212ENST00000531625 ARL2-SNX15V9GYD0 113 aa13.37□□□□□ -0.27
UBXN1-212ENST00000531625 RBAKDNA6NC62 111 aa13.36□□□□□ -0.27
UBXN1-212ENST00000531625 TCRAP04437 139 aa13.35□□□□□ -0.27
UBXN1-212ENST00000531625 TSPOP30536 169 aa13.35□□□□□ -0.27
UBXN1-212ENST00000531625 LEPP41159 167 aa13.35□□□□□ -0.27
UBXN1-212ENST00000531625 ATP5G3P48201 142 aa13.35□□□□□ -0.27
UBXN1-212ENST00000531625 ZNF680Q8NEM1 530 aa13.35□□□□□ -0.27
UBXN1-212ENST00000531625 Q8TAT8 98 aa13.35□□□□□ -0.27
UBXN1-212ENST00000531625 ODF3Q96PU9 254 aa13.35□□□□□ -0.27
UBXN1-212ENST00000531625 MANBALQ9NQG1 85 aa13.35□□□□□ -0.27
UBXN1-212ENST00000531625 TRAV12-2A0A075B6T6 113 aa13.34□□□□□ -0.27
UBXN1-212ENST00000531625 SERTM2A0A1B0GWG4 89 aa13.34□□□□□ -0.27
UBXN1-212ENST00000531625 J3KRW8 73 aa13.34□□□□□ -0.27
UBXN1-212ENST00000531625 K7EQM0 130 aa13.34□□□□□ -0.27
UBXN1-212ENST00000531625 IFNA1P01562 189 aa13.34□□□□□ -0.27
UBXN1-212ENST00000531625 CDKN1BP46527 198 aa13.34□□□□□ -0.27
UBXN1-212ENST00000531625 ZNF138P52744 262 aa13.34□□□□□ -0.27
UBXN1-212ENST00000531625 Q8N1X5 172 aa13.34□□□□□ -0.27
UBXN1-212ENST00000531625 CYB561D1Q8N8Q1 229 aa13.34□□□□□ -0.27
UBXN1-212ENST00000531625 ZNF492Q9P255 531 aa13.34□□□□□ -0.27
UBXN1-212ENST00000531625 HERC1Q15751 4861 aa13.33□□□□□ -0.28
UBXN1-212ENST00000531625 TRAV8-1A0A0A6YYK1 113 aa13.33□□□□□ -0.28
UBXN1-212ENST00000531625 ZNF705GA8MUZ8 300 aaPredicted RBP13.33□□□□□ -0.28
UBXN1-212ENST00000531625 PEX7O00628 323 aa13.33□□□□□ -0.28
UBXN1-212ENST00000531625 CRXO43186 299 aaPredicted RBP13.33□□□□□ -0.28
UBXN1-212ENST00000531625 INSP01308 110 aa13.33□□□□□ -0.28
UBXN1-212ENST00000531625 SGK494Q96LW2 274 aa13.33□□□□□ -0.28
UBXN1-212ENST00000531625 DEFB130BP0DP73 79 aa13.32□□□□□ -0.28
UBXN1-212ENST00000531625 DEFB130AP0DP74 79 aa13.32□□□□□ -0.28
UBXN1-212ENST00000531625 CCL18P55774 89 aa13.32□□□□□ -0.28
UBXN1-212ENST00000531625 CCDC28AQ8IWP9 274 aa13.32□□□□□ -0.28
UBXN1-212ENST00000531625 HIST1H2BAQ96A08 127 aa13.32□□□□□ -0.28
UBXN1-212ENST00000531625 TCEAL7Q9BRU2 100 aa13.32□□□□□ -0.28
UBXN1-212ENST00000531625 F5H768 121 aa13.31□□□□□ -0.28
UBXN1-212ENST00000531625 F6UZH7 168 aa13.31□□□□□ -0.28
UBXN1-212ENST00000531625 NUDT3O95989 172 aa13.31□□□□□ -0.28
UBXN1-212ENST00000531625 PRM2P04554 102 aa13.31□□□□□ -0.28
UBXN1-212ENST00000531625 KIR3DS1Q14943 382 aa13.31□□□□□ -0.28
UBXN1-212ENST00000531625 FAM19A4Q96LR4 140 aa13.31□□□□□ -0.28
UBXN1-212ENST00000531625 TRAV34A0A0B4J273 112 aa13.3□□□□□ -0.28
UBXN1-212ENST00000531625 PLAC8L1A1L4L8 177 aa13.3□□□□□ -0.28
UBXN1-212ENST00000531625 ATP5G1P05496 136 aa13.3□□□□□ -0.28
UBXN1-212ENST00000531625 BCL2P10415 239 aa13.3□□□□□ -0.28
UBXN1-212ENST00000531625 GFI1BQ5VTD9 330 aa13.3□□□□□ -0.28
UBXN1-212ENST00000531625 PCNPQ8WW12 178 aaKnown RBP13.3□□□□□ -0.28
UBXN1-212ENST00000531625 LINC00479Q96M42 142 aa13.3□□□□□ -0.28
UBXN1-212ENST00000531625 PSG8Q9UQ74 426 aa13.3□□□□□ -0.28
UBXN1-212ENST00000531625 LINC00588Q9Y4M8 146 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms