RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 BTF3P20290 206 aaKnown RBP10.86□□□□□ -0.67
CPSF1-205ENST00000531042 ZNF138P52744 262 aa10.86□□□□□ -0.67
CPSF1-205ENST00000531042 SPATA12Q7Z6I5 190 aa10.86□□□□□ -0.67
CPSF1-205ENST00000531042 ST6GAL2Q96JF0 529 aa10.86□□□□□ -0.67
CPSF1-205ENST00000531042 INMT-MINDY4F8WBC2 141 aa10.85□□□□□ -0.67
CPSF1-205ENST00000531042 OR7C2O60412 319 aa10.85□□□□□ -0.67
CPSF1-205ENST00000531042 H2BFSP57053 126 aa10.85□□□□□ -0.67
CPSF1-205ENST00000531042 Q8TAT8 98 aa10.85□□□□□ -0.67
CPSF1-205ENST00000531042 ARPC5LQ9BPX5 153 aa10.85□□□□□ -0.67
CPSF1-205ENST00000531042 MRPL16Q9NX20 251 aaKnown RBP10.85□□□□□ -0.67
CPSF1-205ENST00000531042 RBAKDNA6NC62 111 aa10.84□□□□□ -0.67
CPSF1-205ENST00000531042 PAX4O43316 350 aa10.84□□□□□ -0.67
CPSF1-205ENST00000531042 IGHV3-53P01767 116 aa10.84□□□□□ -0.67
CPSF1-205ENST00000531042 CSN1S1P47710 185 aa10.84□□□□□ -0.67
CPSF1-205ENST00000531042 RANP62826 216 aaKnown RBP10.84□□□□□ -0.67
CPSF1-205ENST00000531042 AKAP14Q86UN6 197 aa10.84□□□□□ -0.67
CPSF1-205ENST00000531042 LYPD1Q8N2G4 141 aa10.84□□□□□ -0.67
CPSF1-205ENST00000531042 PPP1R1CQ8WVI7 109 aa10.84□□□□□ -0.67
CPSF1-205ENST00000531042 ATP5SQ99766 215 aa10.84□□□□□ -0.67
CPSF1-205ENST00000531042 MARVELD1Q9BSK0 173 aa10.84□□□□□ -0.67
CPSF1-205ENST00000531042 ICOSQ9Y6W8 199 aa10.84□□□□□ -0.67
CPSF1-205ENST00000531042 ZNF266Q14584 549 aa10.83□□□□□ -0.68
CPSF1-205ENST00000531042 PRO0255Q9UI72 69 aa10.83□□□□□ -0.68
CPSF1-205ENST00000531042 DNAH5Q8TE73 4624 aa10.83□□□□□ -0.68
CPSF1-205ENST00000531042 SIVA1O15304 175 aa10.82□□□□□ -0.68
CPSF1-205ENST00000531042 MPC2O95563 127 aa10.82□□□□□ -0.68
CPSF1-205ENST00000531042 CRYBA4P53673 196 aa10.82□□□□□ -0.68
CPSF1-205ENST00000531042 LINC00315P59091 139 aa10.82□□□□□ -0.68
CPSF1-205ENST00000531042 KRTAP10-2P60368 255 aa10.82□□□□□ -0.68
CPSF1-205ENST00000531042 UBE2L3P68036 154 aaKnown RBP10.82□□□□□ -0.68
CPSF1-205ENST00000531042 ZNF415Q09FC8 603 aa10.82□□□□□ -0.68
CPSF1-205ENST00000531042 SLAQ13239 276 aa10.82□□□□□ -0.68
CPSF1-205ENST00000531042 FHL2Q14192 279 aa10.82□□□□□ -0.68
CPSF1-205ENST00000531042 FFAR4Q5NUL3 377 aa10.82□□□□□ -0.68
CPSF1-205ENST00000531042 MAPKAPK5-AS1Q8N8E1 139 aa10.82□□□□□ -0.68
CPSF1-205ENST00000531042 HHLA3Q9XRX5 114 aa10.82□□□□□ -0.68
CPSF1-205ENST00000531042 HSPB11Q9Y547 144 aa10.82□□□□□ -0.68
CPSF1-205ENST00000531042 APOBP04114 4563 aaKnown RBP10.82□□□□□ -0.68
CPSF1-205ENST00000531042 NXPH4O95158 308 aa10.81□□□□□ -0.68
CPSF1-205ENST00000531042 KHDC3LQ587J8 217 aa10.81□□□□□ -0.68
CPSF1-205ENST00000531042 MUC21Q5SSG8 566 aa10.81□□□□□ -0.68
CPSF1-205ENST00000531042 Q6ZRN7 208 aaPredicted RBP10.81□□□□□ -0.68
CPSF1-205ENST00000531042 C8orf49Q96NF6 230 aa10.81□□□□□ -0.68
CPSF1-205ENST00000531042 MDFICQ9P1T7 246 aa10.81□□□□□ -0.68
CPSF1-205ENST00000531042 DIRC3C9JPN6 131 aa10.8□□□□□ -0.68
CPSF1-205ENST00000531042 IFNA5P01569 189 aa10.8□□□□□ -0.68
CPSF1-205ENST00000531042 PET100P0DJ07 73 aa10.8□□□□□ -0.68
CPSF1-205ENST00000531042 RPL12P30050 165 aaKnown RBP10.8□□□□□ -0.68
CPSF1-205ENST00000531042 TAS2R45P59539 299 aa10.8□□□□□ -0.68
CPSF1-205ENST00000531042 Q6AWC8 147 aa10.8□□□□□ -0.68
CPSF1-205ENST00000531042 LYPD5Q6UWN5 251 aa10.8□□□□□ -0.68
CPSF1-205ENST00000531042 SCGB1C1Q8TD33 95 aa10.8□□□□□ -0.68
CPSF1-205ENST00000531042 SMIM3Q9BZL3 60 aa10.8□□□□□ -0.68
CPSF1-205ENST00000531042 LENEPQ9Y5L5 61 aa10.8□□□□□ -0.68
CPSF1-205ENST00000531042 SSNA1O43805 119 aa10.79□□□□□ -0.68
CPSF1-205ENST00000531042 MRPL23Q16540 153 aaKnown RBP10.79□□□□□ -0.68
CPSF1-205ENST00000531042 TRGV4A0A0C4DH28 118 aa10.78□□□□□ -0.68
CPSF1-205ENST00000531042 EIF3GO75821 320 aaKnown RBP eCLIP10.78□□□□□ -0.68
CPSF1-205ENST00000531042 FAM159AQ6UWV7 190 aa10.78□□□□□ -0.68
CPSF1-205ENST00000531042 IQCF2Q8IXL9 164 aa10.78□□□□□ -0.68
CPSF1-205ENST00000531042 TMED6Q8WW62 240 aa10.78□□□□□ -0.68
CPSF1-205ENST00000531042 RASL10AQ92737 203 aa10.78□□□□□ -0.68
CPSF1-205ENST00000531042 HYLS1Q96M11 299 aa10.78□□□□□ -0.68
CPSF1-205ENST00000531042 SPXQ9BT56 116 aa10.78□□□□□ -0.68
CPSF1-205ENST00000531042 ALG5Q9Y673 324 aa10.78□□□□□ -0.68
CPSF1-205ENST00000531042 TRGV11A0A075B6L2 103 aa10.77□□□□□ -0.69
CPSF1-205ENST00000531042 PGPA6NDG6 321 aa10.77□□□□□ -0.69
CPSF1-205ENST00000531042 SFTA3P0C7M3 94 aa10.77□□□□□ -0.69
CPSF1-205ENST00000531042 TMEM183BQ1AE95 376 aa10.77□□□□□ -0.69
CPSF1-205ENST00000531042 NEGR1Q7Z3B1 354 aa10.77□□□□□ -0.69
CPSF1-205ENST00000531042 TMEM183AQ8IXX5 376 aa10.77□□□□□ -0.69
CPSF1-205ENST00000531042 Q8N1X5 172 aa10.77□□□□□ -0.69
CPSF1-205ENST00000531042 OR10G4Q8NGN3 311 aa10.77□□□□□ -0.69
CPSF1-205ENST00000531042 ZNF479Q96JC4 524 aa10.77□□□□□ -0.69
CPSF1-205ENST00000531042 WFDC1Q9HC57 220 aa10.77□□□□□ -0.69
CPSF1-205ENST00000531042 OTORQ9NRC9 128 aa10.77□□□□□ -0.69
CPSF1-205ENST00000531042 MBD2Q9UBB5 411 aa10.77□□□□□ -0.69
CPSF1-205ENST00000531042 TDRG1Q3Y452 100 aa10.76□□□□□ -0.69
CPSF1-205ENST00000531042 CMTM2Q8TAZ6 248 aa10.76□□□□□ -0.69
CPSF1-205ENST00000531042 K7EQD1 137 aa10.75□□□□□ -0.69
CPSF1-205ENST00000531042 ACOT6Q3I5F7 207 aaPredicted RBP10.75□□□□□ -0.69
CPSF1-205ENST00000531042 FAM74A1Q5RGS3 127 aa10.75□□□□□ -0.69
CPSF1-205ENST00000531042 PQLC2Q6ZP29 291 aa10.75□□□□□ -0.69
CPSF1-205ENST00000531042 ARL6IP6Q8N6S5 226 aa10.75□□□□□ -0.69
CPSF1-205ENST00000531042 RPH3ALQ9UNE2 315 aa10.75□□□□□ -0.69
CPSF1-205ENST00000531042 TNFRSF18Q9Y5U5 241 aa10.75□□□□□ -0.69
CPSF1-205ENST00000531042 A0A1W2PPV4 95 aa10.74□□□□□ -0.69
CPSF1-205ENST00000531042 GNRH2O43555 120 aa10.74□□□□□ -0.69
CPSF1-205ENST00000531042 SRIP30626 198 aa10.74□□□□□ -0.69
CPSF1-205ENST00000531042 GOLT1AQ6ZVE7 132 aa10.74□□□□□ -0.69
CPSF1-205ENST00000531042 SCRT2Q9NQ03 307 aa10.74□□□□□ -0.69
CPSF1-205ENST00000531042 NAGKQ9UJ70 344 aa10.74□□□□□ -0.69
CPSF1-205ENST00000531042 TRAV9-2A0A087WT02 112 aa10.73□□□□□ -0.69
CPSF1-205ENST00000531042 TRAV4A0A0B4J268 109 aa10.73□□□□□ -0.69
CPSF1-205ENST00000531042 ORM1P02763 201 aa10.73□□□□□ -0.69
CPSF1-205ENST00000531042 GYPEP15421 78 aa10.73□□□□□ -0.69
CPSF1-205ENST00000531042 RAB2AP61019 212 aa10.73□□□□□ -0.69
CPSF1-205ENST00000531042 NFE4Q86UQ8 179 aa10.73□□□□□ -0.69
CPSF1-205ENST00000531042 TCTE3Q8IZS6 198 aa10.73□□□□□ -0.69
CPSF1-205ENST00000531042 PCNPQ8WW12 178 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms