RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 TMEM256Q8N2U0 113 aa12.29□□□□□ -0.44
SF3B2-211ENST00000531041 ZFP30Q9Y2G7 519 aa12.29□□□□□ -0.44
SF3B2-211ENST00000531041 GOLT1BQ9Y3E0 138 aa12.29□□□□□ -0.44
SF3B2-211ENST00000531041 TMEM250H0YL14 139 aa12.28□□□□□ -0.44
SF3B2-211ENST00000531041 RGS13O14921 159 aa12.28□□□□□ -0.44
SF3B2-211ENST00000531041 RBMY1A1P0DJD3 496 aaKnown RBP12.28□□□□□ -0.44
SF3B2-211ENST00000531041 RBMY1CP0DJD4 496 aa12.28□□□□□ -0.44
SF3B2-211ENST00000531041 RBMY1FQ15415 496 aaKnown RBP12.28□□□□□ -0.44
SF3B2-211ENST00000531041 PRR9Q5T870 116 aa12.28□□□□□ -0.44
SF3B2-211ENST00000531041 OR11H2Q8NH07 326 aa12.28□□□□□ -0.44
SF3B2-211ENST00000531041 TRAV12-3A0A0B4J271 114 aa12.28□□□□□ -0.44
SF3B2-211ENST00000531041 LTAP01374 205 aa12.28□□□□□ -0.44
SF3B2-211ENST00000531041 RNASE4P34096 147 aaKnown RBP12.28□□□□□ -0.44
SF3B2-211ENST00000531041 RPL35P42766 123 aaKnown RBP12.28□□□□□ -0.44
SF3B2-211ENST00000531041 BTN1A1Q13410 526 aa12.28□□□□□ -0.44
SF3B2-211ENST00000531041 MED9Q9NWA0 146 aa12.28□□□□□ -0.44
SF3B2-211ENST00000531041 ZNF324O75467 553 aaPredicted RBP12.27□□□□□ -0.45
SF3B2-211ENST00000531041 TAS2R60P59551 318 aa12.27□□□□□ -0.45
SF3B2-211ENST00000531041 Q6AWC8 147 aa12.27□□□□□ -0.45
SF3B2-211ENST00000531041 COX8CQ7Z4L0 72 aa12.27□□□□□ -0.45
SF3B2-211ENST00000531041 C8orf49Q96NF6 230 aa12.27□□□□□ -0.45
SF3B2-211ENST00000531041 NEU1Q99519 415 aa12.27□□□□□ -0.45
SF3B2-211ENST00000531041 NIPSNAP3BQ9BS92 247 aa12.27□□□□□ -0.45
SF3B2-211ENST00000531041 TMEM208Q9BTX3 173 aa12.27□□□□□ -0.45
SF3B2-211ENST00000531041 DERL1Q9BUN8 251 aa12.27□□□□□ -0.45
SF3B2-211ENST00000531041 X6R8D5 127 aa12.27□□□□□ -0.45
SF3B2-211ENST00000531041 DNAH9Q9NYC9 4486 aa12.26□□□□□ -0.45
SF3B2-211ENST00000531041 IGHV3OR16-12A0A075B7B8 117 aa12.26□□□□□ -0.45
SF3B2-211ENST00000531041 SMUG1Q53HV7 270 aa12.26□□□□□ -0.45
SF3B2-211ENST00000531041 SMDT1Q9H4I9 107 aa12.26□□□□□ -0.45
SF3B2-211ENST00000531041 SMIM9A6NGZ8 99 aa12.25□□□□□ -0.45
SF3B2-211ENST00000531041 H7BYZ3 331 aa12.25□□□□□ -0.45
SF3B2-211ENST00000531041 TMEM183AQ8IXX5 376 aa12.25□□□□□ -0.45
SF3B2-211ENST00000531041 LINC01587Q99440 93 aa12.25□□□□□ -0.45
SF3B2-211ENST00000531041 TGP01266 2768 aa12.25□□□□□ -0.45
SF3B2-211ENST00000531041 GCGP01275 180 aa12.24□□□□□ -0.45
SF3B2-211ENST00000531041 SRP19P09132 144 aaKnown RBP12.24□□□□□ -0.45
SF3B2-211ENST00000531041 MIFP14174 115 aa12.24□□□□□ -0.45
SF3B2-211ENST00000531041 PEA15Q15121 130 aa12.24□□□□□ -0.45
SF3B2-211ENST00000531041 BAGE2Q86Y30 109 aa12.24□□□□□ -0.45
SF3B2-211ENST00000531041 PYGO2Q9BRQ0 406 aa12.24□□□□□ -0.45
SF3B2-211ENST00000531041 MLST8Q9BVC4 326 aa12.24□□□□□ -0.45
SF3B2-211ENST00000531041 U3KQK5 164 aa12.24□□□□□ -0.45
SF3B2-211ENST00000531041 ZNF80P51504 273 aaPredicted RBP12.23□□□□□ -0.45
SF3B2-211ENST00000531041 SRSF3P84103 164 aaKnown RBP12.23□□□□□ -0.45
SF3B2-211ENST00000531041 Q6ZQT7 251 aa12.23□□□□□ -0.45
SF3B2-211ENST00000531041 PARLQ9H300 379 aa12.23□□□□□ -0.45
SF3B2-211ENST00000531041 TRAV21A0A0B4J279 112 aa12.22□□□□□ -0.45
SF3B2-211ENST00000531041 RAB19A4D1S5 217 aa12.22□□□□□ -0.45
SF3B2-211ENST00000531041 PFN1P07737 140 aaKnown RBP12.22□□□□□ -0.45
SF3B2-211ENST00000531041 CENPWQ5EE01 88 aa12.22□□□□□ -0.45
SF3B2-211ENST00000531041 Q8NAQ8 132 aa12.22□□□□□ -0.45
SF3B2-211ENST00000531041 SMIM12Q96EX1 92 aa12.22□□□□□ -0.45
SF3B2-211ENST00000531041 ZC2HC1AQ96GY0 325 aa12.22□□□□□ -0.45
SF3B2-211ENST00000531041 LINC00467Q9BRT7 94 aa12.22□□□□□ -0.45
SF3B2-211ENST00000531041 TRBV20OR9-2A0A075B6H5 130 aa12.21□□□□□ -0.45
SF3B2-211ENST00000531041 GNG4P50150 75 aa12.21□□□□□ -0.45
SF3B2-211ENST00000531041 RRN3P1Q2M238 152 aa12.21□□□□□ -0.45
SF3B2-211ENST00000531041 IGHV4-28A0A0C4DH34 117 aa12.2□□□□□ -0.46
SF3B2-211ENST00000531041 FABP5P3A8MUU1 101 aa12.2□□□□□ -0.46
SF3B2-211ENST00000531041 ZNF705GA8MUZ8 300 aaPredicted RBP12.2□□□□□ -0.46
SF3B2-211ENST00000531041 C9JCJ5 164 aa12.2□□□□□ -0.46
SF3B2-211ENST00000531041 C9JQL5 133 aa12.2□□□□□ -0.46
SF3B2-211ENST00000531041 NHLRC2Q8NBF2 726 aa12.2□□□□□ -0.46
SF3B2-211ENST00000531041 HUWE1Q7Z6Z7 4374 aaKnown RBP12.2□□□□□ -0.46
SF3B2-211ENST00000531041 IGHV1OR15-1A0A075B7D0 117 aa12.2□□□□□ -0.46
SF3B2-211ENST00000531041 IGLV2-8P01709 118 aa12.2□□□□□ -0.46
SF3B2-211ENST00000531041 PRM2P04554 102 aa12.2□□□□□ -0.46
SF3B2-211ENST00000531041 HTN1P15515 57 aa12.2□□□□□ -0.46
SF3B2-211ENST00000531041 CRIP1P50238 77 aa12.2□□□□□ -0.46
SF3B2-211ENST00000531041 CEBPGP53567 150 aa12.2□□□□□ -0.46
SF3B2-211ENST00000531041 ZNF674Q2M3X9 581 aa12.2□□□□□ -0.46
SF3B2-211ENST00000531041 EIF4E3Q8N5X7 224 aaKnown RBP12.2□□□□□ -0.46
SF3B2-211ENST00000531041 C11orf68Q9H3H3 251 aaKnown RBP12.2□□□□□ -0.46
SF3B2-211ENST00000531041 AZU1P20160 251 aa12.19□□□□□ -0.46
SF3B2-211ENST00000531041 TDRG1Q3Y452 100 aa12.19□□□□□ -0.46
SF3B2-211ENST00000531041 ANXA2RQ3ZCQ2 193 aa12.19□□□□□ -0.46
SF3B2-211ENST00000531041 FAM162BQ5T6X4 162 aa12.19□□□□□ -0.46
SF3B2-211ENST00000531041 FAM159AQ6UWV7 190 aa12.19□□□□□ -0.46
SF3B2-211ENST00000531041 ZNF493Q6ZR52 646 aa12.19□□□□□ -0.46
SF3B2-211ENST00000531041 STAB2Q8WWQ8 2551 aa12.18□□□□□ -0.46
SF3B2-211ENST00000531041 TMEM189A5PLL7 270 aa12.18□□□□□ -0.46
SF3B2-211ENST00000531041 MUC21Q5SSG8 566 aa12.18□□□□□ -0.46
SF3B2-211ENST00000531041 RNASE8Q8TDE3 154 aaKnown RBP12.18□□□□□ -0.46
SF3B2-211ENST00000531041 TMEM263Q8WUH6 116 aaKnown RBP12.18□□□□□ -0.46
SF3B2-211ENST00000531041 C16orf74Q96GX8 76 aa12.18□□□□□ -0.46
SF3B2-211ENST00000531041 SMIM7Q9BQ49 75 aa12.18□□□□□ -0.46
SF3B2-211ENST00000531041 C11orf21Q9P2W6 132 aa12.18□□□□□ -0.46
SF3B2-211ENST00000531041 A0A0J9YWU9 116 aa12.17□□□□□ -0.46
SF3B2-211ENST00000531041 LINC00862A6NCI5 91 aa12.17□□□□□ -0.46
SF3B2-211ENST00000531041 PGPEP1LA6NFU8 196 aa12.17□□□□□ -0.46
SF3B2-211ENST00000531041 ZNF727A8MUV8 499 aa12.17□□□□□ -0.46
SF3B2-211ENST00000531041 SH2D1AO60880 128 aa12.17□□□□□ -0.46
SF3B2-211ENST00000531041 KCNS1Q96KK3 526 aa12.17□□□□□ -0.46
SF3B2-211ENST00000531041 CBY3A6NI87 242 aa12.16□□□□□ -0.46
SF3B2-211ENST00000531041 DEFB4AO15263 64 aa12.16□□□□□ -0.46
SF3B2-211ENST00000531041 FAM74A3Q4VXF1 159 aa12.16□□□□□ -0.46
SF3B2-211ENST00000531041 OCC1Q8TAD7 63 aa12.16□□□□□ -0.46
SF3B2-211ENST00000531041 EDA2RQ9HAV5 297 aa12.16□□□□□ -0.46
SF3B2-211ENST00000531041 BIN3Q9NQY0 253 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms