RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 IGHV7-4-1A0A0J9YVY3 117 aa4.24□□□□□ -1.73
PCF11-205ENST00000530906 A0A1B0GUS0 222 aa4.24□□□□□ -1.73
PCF11-205ENST00000530906 PSMB8P28062 276 aa4.24□□□□□ -1.73
PCF11-205ENST00000530906 ID1P41134 155 aa4.24□□□□□ -1.73
PCF11-205ENST00000530906 KRTDAPP60985 99 aa4.24□□□□□ -1.73
PCF11-205ENST00000530906 CACNG7P62955 275 aa4.24□□□□□ -1.73
PCF11-205ENST00000530906 DEFB113Q30KQ7 82 aa4.24□□□□□ -1.73
PCF11-205ENST00000530906 RNASEKQ6P5S7 137 aaKnown RBP4.24□□□□□ -1.73
PCF11-205ENST00000530906 LYZL1Q6UWQ5 148 aa4.24□□□□□ -1.73
PCF11-205ENST00000530906 SMIM15Q7Z3B0 74 aa4.24□□□□□ -1.73
PCF11-205ENST00000530906 SPATA12Q7Z6I5 190 aa4.24□□□□□ -1.73
PCF11-205ENST00000530906 NIT1Q86X76 327 aa4.24□□□□□ -1.73
PCF11-205ENST00000530906 ORMDL3Q8N138 153 aa4.24□□□□□ -1.73
PCF11-205ENST00000530906 TMEM86BQ8N661 226 aa4.24□□□□□ -1.73
PCF11-205ENST00000530906 RNF152Q8N8N0 203 aa4.24□□□□□ -1.73
PCF11-205ENST00000530906 OR4X2Q8NGF9 303 aa4.24□□□□□ -1.73
PCF11-205ENST00000530906 OR10J6PQ8NGY7 276 aa4.24□□□□□ -1.73
PCF11-205ENST00000530906 IL17DQ8TAD2 202 aa4.24□□□□□ -1.73
PCF11-205ENST00000530906 C16orf92Q96LL3 132 aa4.24□□□□□ -1.73
PCF11-205ENST00000530906 VGLL1Q99990 258 aa4.24□□□□□ -1.73
PCF11-205ENST00000530906 MIEN1Q9BRT3 115 aa4.24□□□□□ -1.73
PCF11-205ENST00000530906 TMEM70Q9BUB7 260 aa4.24□□□□□ -1.73
PCF11-205ENST00000530906 PEF1Q9UBV8 284 aaKnown RBP4.24□□□□□ -1.73
PCF11-205ENST00000530906 AKAP6Q13023 2319 aa4.24□□□□□ -1.73
PCF11-205ENST00000530906 MED13LQ71F56 2210 aa4.23□□□□□ -1.73
PCF11-205ENST00000530906 ZZEF1O43149 2961 aa4.23□□□□□ -1.73
PCF11-205ENST00000530906 PRRC2AP48634 2157 aaKnown RBP4.23□□□□□ -1.73
PCF11-205ENST00000530906 IGHV3-35A0A0C4DH35 117 aa4.23□□□□□ -1.73
PCF11-205ENST00000530906 LGALS9O00182 355 aa4.23□□□□□ -1.73
PCF11-205ENST00000530906 SOCS3O14543 225 aa4.23□□□□□ -1.73
PCF11-205ENST00000530906 LEPROTL1O95214 131 aa4.23□□□□□ -1.73
PCF11-205ENST00000530906 TGFAP01135 160 aa4.23□□□□□ -1.73
PCF11-205ENST00000530906 ORM1P02763 201 aa4.23□□□□□ -1.73
PCF11-205ENST00000530906 C3orf79P0CE67 100 aa4.23□□□□□ -1.73
PCF11-205ENST00000530906 RNF224P0DH78 156 aa4.23□□□□□ -1.73
PCF11-205ENST00000530906 NTF3P20783 257 aa4.23□□□□□ -1.73
PCF11-205ENST00000530906 LY6EQ16553 131 aa4.23□□□□□ -1.73
PCF11-205ENST00000530906 DEFB112Q30KQ8 113 aa4.23□□□□□ -1.73
PCF11-205ENST00000530906 PET117Q6UWS5 81 aa4.23□□□□□ -1.73
PCF11-205ENST00000530906 Q6YL49 198 aa4.23□□□□□ -1.73
PCF11-205ENST00000530906 FA2HQ7L5A8 372 aa4.23□□□□□ -1.73
PCF11-205ENST00000530906 APRG1Q8IVJ8 170 aa4.23□□□□□ -1.73
PCF11-205ENST00000530906 Q8N2B8 174 aa4.23□□□□□ -1.73
PCF11-205ENST00000530906 DEFB125Q8N687 156 aa4.23□□□□□ -1.73
PCF11-205ENST00000530906 ZNF738Q8NE65 137 aa4.23□□□□□ -1.73
PCF11-205ENST00000530906 OR10AG1Q8NH19 301 aa4.23□□□□□ -1.73
PCF11-205ENST00000530906 MYOZ3Q8TDC0 251 aa4.23□□□□□ -1.73
PCF11-205ENST00000530906 C14orf144Q96I85 54 aa4.23□□□□□ -1.73
PCF11-205ENST00000530906 ODF3Q96PU9 254 aa4.23□□□□□ -1.73
PCF11-205ENST00000530906 AGPAT4-IT1Q9H0P7 198 aa4.23□□□□□ -1.73
PCF11-205ENST00000530906 SMPXQ9UHP9 88 aa4.23□□□□□ -1.73
PCF11-205ENST00000530906 LRBAP50851 2863 aa4.22□□□□□ -1.73
PCF11-205ENST00000530906 CFAP46Q8IYW2 2715 aa4.22□□□□□ -1.73
PCF11-205ENST00000530906 TRAV21A0A0B4J279 112 aa4.22□□□□□ -1.73
PCF11-205ENST00000530906 IGHV1-24A0A0C4DH33 117 aa4.22□□□□□ -1.73
PCF11-205ENST00000530906 LINC01546A6NGU7 62 aa4.22□□□□□ -1.73
PCF11-205ENST00000530906 C2orf70A6NJV1 201 aa4.22□□□□□ -1.73
PCF11-205ENST00000530906 SNAI2O43623 268 aa4.22□□□□□ -1.73
PCF11-205ENST00000530906 LGALS1P09382 135 aaKnown RBP4.22□□□□□ -1.73
PCF11-205ENST00000530906 IGHV4-31P0DP07 118 aa4.22□□□□□ -1.73
PCF11-205ENST00000530906 BLCAPP62952 87 aa4.22□□□□□ -1.73
PCF11-205ENST00000530906 SCGB2A2Q13296 93 aa4.22□□□□□ -1.73
PCF11-205ENST00000530906 Q5PR19 223 aa4.22□□□□□ -1.73
PCF11-205ENST00000530906 IL17RELQ6ZVW7 336 aa4.22□□□□□ -1.73
PCF11-205ENST00000530906 ZNF575Q86XF7 245 aa4.22□□□□□ -1.73
PCF11-205ENST00000530906 Q8N976 141 aa4.22□□□□□ -1.73
PCF11-205ENST00000530906 PRSS3P2Q8NHM4 247 aa4.22□□□□□ -1.73
PCF11-205ENST00000530906 Q8TAT8 98 aa4.22□□□□□ -1.73
PCF11-205ENST00000530906 UBE2E2Q96LR5 201 aa4.22□□□□□ -1.73
PCF11-205ENST00000530906 PRELID3AQ96N28 172 aa4.22□□□□□ -1.73
PCF11-205ENST00000530906 BBC3Q96PG8 261 aaPredicted RBP4.22□□□□□ -1.73
PCF11-205ENST00000530906 C2orf88Q9BSF0 95 aa4.22□□□□□ -1.73
PCF11-205ENST00000530906 RHPN1-AS1Q9BWJ2 59 aa4.22□□□□□ -1.73
PCF11-205ENST00000530906 MAP1LC3CQ9BXW4 147 aa4.22□□□□□ -1.73
PCF11-205ENST00000530906 PRO1933Q9H354 126 aa4.22□□□□□ -1.73
PCF11-205ENST00000530906 NXT2Q9NPJ8 142 aaKnown RBP4.22□□□□□ -1.73
PCF11-205ENST00000530906 UQCR10Q9UDW1 63 aa4.22□□□□□ -1.73
PCF11-205ENST00000530906 USP9XQ93008 2570 aaPredicted RBP4.22□□□□□ -1.73
PCF11-205ENST00000530906 USP24Q9UPU5 2620 aa4.22□□□□□ -1.73
PCF11-205ENST00000530906 IGHV3OR16-8A0A075B7F1 116 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 TRAV9-2A0A087WT02 112 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 TRAV2A0A0B4J234 112 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 LINC01549A6NIU2 74 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 PRSS47A8MTI9 375 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 HSBP1L1C9JCN9 74 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 PRAC2D3DTV9 90 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 SYS1-DBNDD2H3BUS1 97 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 K7EMI3 77 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 M0QZ24 198 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 M0R143 59 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 TCF21O43680 179 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 PPP1R17O96001 155 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 IGHV4-59P01825 116 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 CKS2P33552 79 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 ZNF80P51504 273 aaPredicted RBP4.21□□□□□ -1.74
PCF11-205ENST00000530906 SNRPD3P62318 126 aaKnown RBP4.21□□□□□ -1.74
PCF11-205ENST00000530906 SRSF1Q07955 248 aaKnown RBP eCLIP4.21□□□□□ -1.74
PCF11-205ENST00000530906 TWIST1Q15672 202 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 UNQ9165/PRO28630Q6UXU0 137 aa4.21□□□□□ -1.74
PCF11-205ENST00000530906 FAM19A2Q8N3H0 131 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms