RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 PSG11Q9UQ72 335 aa2.94□□□□□ -1.94
USP47-209ENST00000530041 SIGLEC9Q9Y336 463 aa2.94□□□□□ -1.94
USP47-209ENST00000530041 F11RQ9Y624 299 aaKnown RBP2.94□□□□□ -1.94
USP47-209ENST00000530041 SDK2Q58EX2 2172 aa2.94□□□□□ -1.94
USP47-209ENST00000530041 MED12LQ86YW9 2145 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 USF3Q68DE3 2245 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 A0A0J9YXY3 114 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 INS-IGF2F8WCM5 200 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 M0R1X1 148 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 CD5LO43866 347 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 C8orf88P0DMB2 117 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 SSTR5P35346 364 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 GABRA2P47869 451 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 PRR3P79522 188 aaKnown RBP2.93□□□□□ -1.94
USP47-209ENST00000530041 FXYD3Q14802 87 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 IBA57Q5T440 356 aaKnown RBP2.93□□□□□ -1.94
USP47-209ENST00000530041 MRPL54Q6P161 138 aaKnown RBP2.93□□□□□ -1.94
USP47-209ENST00000530041 TCF24Q7RTU0 167 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 SPATA12Q7Z6I5 190 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 DOLPP1Q86YN1 238 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 FAM19A2Q8N3H0 131 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 DEFB125Q8N687 156 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 OR1L8Q8NGR8 309 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 OR4S2Q8NH73 311 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 SLC25A40Q8TBP6 338 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 CHCHD1Q96BP2 118 aaKnown RBP2.93□□□□□ -1.94
USP47-209ENST00000530041 SMIM12Q96EX1 92 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 MRAP2Q96G30 205 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 ZNF714Q96N38 554 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 NABP2Q9BQ15 211 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 MS4A6AQ9H2W1 248 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 IFI27L2Q9H2X8 130 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 ZNF492Q9P255 531 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 PRNDQ9UKY0 176 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 SOX21Q9Y651 276 aaPredicted RBP2.93□□□□□ -1.94
USP47-209ENST00000530041 CABIN1Q9Y6J0 2220 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 ESPL1Q14674 2120 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 FREM1Q5H8C1 2179 aa2.93□□□□□ -1.94
USP47-209ENST00000530041 IGKV1OR2-108A0A075B7D4 117 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 IGHV3-43A0A0B4J1X8 118 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 IGHV3OR16-9A0A0B4J2B5 98 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 DEFB108AA8MXU0 73 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 F5H768 121 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 M0R2Z0 102 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 UPK2O00526 184 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 PEX7O00628 323 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 OR7C2O60412 319 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 FSTL3O95633 263 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 RNASE2P10153 161 aaKnown RBP2.92□□□□□ -1.94
USP47-209ENST00000530041 NTF3P20783 257 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 COL8A2P25067 703 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 HTR1DP28221 377 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 MPV17P39210 176 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 CA7P43166 264 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 ZNF138P52744 262 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 DLX6P56179 175 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 TCL1AP56279 114 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 PRCDQ00LT1 54 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 SMIM21Q3B7S5 101 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 OCIAD2Q56VL3 154 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 RPL39P5Q59GN2 51 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 BVES-AS1Q5T3Y7 98 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 CASC10Q5T4H9 136 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 ZNF826PQ6ZT77 177 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 SMIM15Q7Z3B0 74 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 GATD1Q8NB37 220 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 NUP35Q8NFH5 326 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 KLF14Q8TD94 323 aaPredicted RBP2.92□□□□□ -1.94
USP47-209ENST00000530041 C7orf33Q8WU49 177 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 CT55Q8WUE5 264 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 FAM19A4Q96LR4 140 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 PMCHL2Q9BQD1 86 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 TMEM70Q9BUB7 260 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 TTTY12Q9BZ98 90 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 CST9LQ9H4G1 147 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 LINC00574Q9H8X3 128 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 ENY2Q9NPA8 101 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 IDI2-AS1Q9NZ38 188 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 ZNF835Q9Y2P0 537 aa2.92□□□□□ -1.94
USP47-209ENST00000530041 TET2Q6N021 2002 aaPredicted RBP2.92□□□□□ -1.94
USP47-209ENST00000530041 CACNA1EQ15878 2313 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 IGKV1D-17A0A075B6S4 117 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 SMIM26A0A096LP01 95 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 A0A0J9YXV3 536 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 TRBV6-1A0A0K0K1D8 114 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 C19orf71A6NCJ1 209 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 OR4C46A6NHA9 309 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 SYS1-DBNDD2H3BUS1 97 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 SPINK4O60575 86 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 TFF1P04155 84 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 IGLC1P0CG04 106 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 HIST1H1EP10412 219 aaKnown RBP2.91□□□□□ -1.94
USP47-209ENST00000530041 MGST1P10620 155 aaKnown RBP2.91□□□□□ -1.94
USP47-209ENST00000530041 CXCL12P48061 93 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 FOXA3P55318 350 aaPredicted RBP2.91□□□□□ -1.94
USP47-209ENST00000530041 HIST1H1AQ02539 215 aaPredicted RBP2.91□□□□□ -1.94
USP47-209ENST00000530041 MPV17L2Q567V2 206 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 Q56UQ5 140 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 TTC32Q5I0X7 151 aa2.91□□□□□ -1.94
USP47-209ENST00000530041 LINC01545Q5VT33 79 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 185.6 ms