RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 PRELID1Q9Y255 219 aa12.44□□□□□ -0.42
SSRP1-204ENST00000529002 RNF213Q63HN8 5207 aa12.43□□□□□ -0.42
SSRP1-204ENST00000529002 C9orf170A2RU37 121 aa12.43□□□□□ -0.42
SSRP1-204ENST00000529002 MT1HL1P0DM35 61 aa12.43□□□□□ -0.42
SSRP1-204ENST00000529002 HIST1H1EP10412 219 aaKnown RBP12.43□□□□□ -0.42
SSRP1-204ENST00000529002 TNFSF8P32971 234 aa12.43□□□□□ -0.42
SSRP1-204ENST00000529002 FAUP35544 74 aaKnown RBP12.43□□□□□ -0.42
SSRP1-204ENST00000529002 DAZAP1Q96EP5 407 aaKnown RBP12.43□□□□□ -0.42
SSRP1-204ENST00000529002 TM2D2Q9BX73 214 aa12.43□□□□□ -0.42
SSRP1-204ENST00000529002 TSC22D2O75157 780 aa12.42□□□□□ -0.42
SSRP1-204ENST00000529002 OR1L4Q8NGR5 311 aa12.42□□□□□ -0.42
SSRP1-204ENST00000529002 C7orf66A4D0T2 115 aa12.41□□□□□ -0.42
SSRP1-204ENST00000529002 FABP12A6NFH5 140 aa12.41□□□□□ -0.42
SSRP1-204ENST00000529002 GATA1P15976 413 aaPredicted RBP12.41□□□□□ -0.42
SSRP1-204ENST00000529002 SH2D6Q7Z4S9 175 aa12.41□□□□□ -0.42
SSRP1-204ENST00000529002 TOMM5Q8N4H5 51 aa12.41□□□□□ -0.42
SSRP1-204ENST00000529002 SLC25A21Q9BQT8 299 aaPredicted RBP12.41□□□□□ -0.42
SSRP1-204ENST00000529002 SPXQ9BT56 116 aa12.41□□□□□ -0.42
SSRP1-204ENST00000529002 GGACTQ9BVM4 153 aa12.41□□□□□ -0.42
SSRP1-204ENST00000529002 RBFOX3A6NFN3 312 aa12.4□□□□□ -0.42
SSRP1-204ENST00000529002 ZNF138P52744 262 aa12.4□□□□□ -0.42
SSRP1-204ENST00000529002 UBE2MP61081 183 aaKnown RBP12.4□□□□□ -0.42
SSRP1-204ENST00000529002 DYNC2LI1Q8TCX1 351 aa12.4□□□□□ -0.42
SSRP1-204ENST00000529002 SLC39A9Q9NUM3 307 aa12.4□□□□□ -0.42
SSRP1-204ENST00000529002 GSKIPQ9P0R6 139 aa12.4□□□□□ -0.42
SSRP1-204ENST00000529002 TMEM14CQ9P0S9 112 aa12.4□□□□□ -0.42
SSRP1-204ENST00000529002 RS1O15537 224 aa12.39□□□□□ -0.43
SSRP1-204ENST00000529002 GNRH2O43555 120 aa12.39□□□□□ -0.43
SSRP1-204ENST00000529002 TAS2R30P59541 319 aa12.39□□□□□ -0.43
SSRP1-204ENST00000529002 LAGE3Q14657 143 aa12.39□□□□□ -0.43
SSRP1-204ENST00000529002 IAH1Q2TAA2 248 aaPredicted RBP12.39□□□□□ -0.43
SSRP1-204ENST00000529002 GCSAMLQ5JQS6 135 aa12.39□□□□□ -0.43
SSRP1-204ENST00000529002 DNAJC30Q96LL9 226 aa12.39□□□□□ -0.43
SSRP1-204ENST00000529002 PFDN5Q99471 154 aa12.39□□□□□ -0.43
SSRP1-204ENST00000529002 AAMDCQ9H7C9 122 aa12.39□□□□□ -0.43
SSRP1-204ENST00000529002 NAGKQ9UJ70 344 aa12.39□□□□□ -0.43
SSRP1-204ENST00000529002 FLVCR2Q9UPI3 526 aa12.39□□□□□ -0.43
SSRP1-204ENST00000529002 CST7O76096 145 aa12.38□□□□□ -0.43
SSRP1-204ENST00000529002 MBPP02686 304 aaPredicted RBP12.38□□□□□ -0.43
SSRP1-204ENST00000529002 RPL37AP61513 92 aaKnown RBP12.38□□□□□ -0.43
SSRP1-204ENST00000529002 PDE6HQ13956 83 aa12.38□□□□□ -0.43
SSRP1-204ENST00000529002 ZNF266Q14584 549 aa12.38□□□□□ -0.43
SSRP1-204ENST00000529002 LELP1Q5T871 98 aa12.38□□□□□ -0.43
SSRP1-204ENST00000529002 DAZ4Q86SG3 579 aaKnown RBP12.38□□□□□ -0.43
SSRP1-204ENST00000529002 SLC25A29Q8N8R3 303 aa12.38□□□□□ -0.43
SSRP1-204ENST00000529002 DAZ3Q9NR90 486 aaKnown RBP12.38□□□□□ -0.43
SSRP1-204ENST00000529002 WDR83OSQ9Y284 106 aa12.38□□□□□ -0.43
SSRP1-204ENST00000529002 PFN1P07737 140 aaKnown RBP12.37□□□□□ -0.43
SSRP1-204ENST00000529002 RAB31Q13636 194 aa12.37□□□□□ -0.43
SSRP1-204ENST00000529002 PYDC2Q56P42 97 aa12.37□□□□□ -0.43
SSRP1-204ENST00000529002 C12orf45Q8N5I9 185 aaPredicted RBP12.37□□□□□ -0.43
SSRP1-204ENST00000529002 SLC25A2Q9BXI2 301 aa12.37□□□□□ -0.43
SSRP1-204ENST00000529002 TRGV11A0A075B6L2 103 aa12.36□□□□□ -0.43
SSRP1-204ENST00000529002 IGHV3-73A0A0B4J1V6 119 aa12.36□□□□□ -0.43
SSRP1-204ENST00000529002 M0R2P5 195 aa12.36□□□□□ -0.43
SSRP1-204ENST00000529002 BAK1Q16611 211 aa12.36□□□□□ -0.43
SSRP1-204ENST00000529002 FAM159AQ6UWV7 190 aa12.36□□□□□ -0.43
SSRP1-204ENST00000529002 GPN1Q9HCN4 374 aaPredicted RBP12.36□□□□□ -0.43
SSRP1-204ENST00000529002 UBE2L5PA0A1B0GUS4 154 aa12.35□□□□□ -0.43
SSRP1-204ENST00000529002 FAM24AA6NFZ4 105 aa12.35□□□□□ -0.43
SSRP1-204ENST00000529002 RPL29P47914 159 aaKnown RBP12.35□□□□□ -0.43
SSRP1-204ENST00000529002 AP3S2P59780 193 aa12.35□□□□□ -0.43
SSRP1-204ENST00000529002 Q6AWC8 147 aa12.35□□□□□ -0.43
SSRP1-204ENST00000529002 FAM167A-AS1Q96KT0 104 aa12.35□□□□□ -0.43
SSRP1-204ENST00000529002 ASIPP42127 132 aa12.34□□□□□ -0.43
SSRP1-204ENST00000529002 BCAP31P51572 246 aa12.34□□□□□ -0.43
SSRP1-204ENST00000529002 CAV2P51636 162 aa12.34□□□□□ -0.43
SSRP1-204ENST00000529002 BAXQ07812 192 aa12.34□□□□□ -0.43
SSRP1-204ENST00000529002 PHYHIPLQ96FC7 376 aa12.34□□□□□ -0.43
SSRP1-204ENST00000529002 SLIRPQ9GZT3 109 aaKnown RBP12.34□□□□□ -0.43
SSRP1-204ENST00000529002 GTSF1LQ9H1H1 148 aa12.34□□□□□ -0.43
SSRP1-204ENST00000529002 UQCC1Q9NVA1 299 aa12.34□□□□□ -0.43
SSRP1-204ENST00000529002 TNXBP22105 4242 aa12.34□□□□□ -0.43
SSRP1-204ENST00000529002 TRAV8-3A0A0A6YYJ7 113 aa12.33□□□□□ -0.44
SSRP1-204ENST00000529002 RNF222A6NCQ9 220 aa12.33□□□□□ -0.44
SSRP1-204ENST00000529002 FBLL1A6NHQ2 334 aaKnown RBP12.33□□□□□ -0.44
SSRP1-204ENST00000529002 L7N2F9 121 aa12.33□□□□□ -0.44
SSRP1-204ENST00000529002 OR10J4P0C629 311 aa12.33□□□□□ -0.44
SSRP1-204ENST00000529002 NBEAP1P0C6P0 100 aa12.33□□□□□ -0.44
SSRP1-204ENST00000529002 VAMP2P63027 116 aa12.33□□□□□ -0.44
SSRP1-204ENST00000529002 TDRG1Q3Y452 100 aa12.33□□□□□ -0.44
SSRP1-204ENST00000529002 DPPA3Q6W0C5 159 aa12.33□□□□□ -0.44
SSRP1-204ENST00000529002 MIR17HGQ75NE6 70 aa12.33□□□□□ -0.44
SSRP1-204ENST00000529002 LSM5Q9Y4Y9 91 aaKnown RBP12.33□□□□□ -0.44
SSRP1-204ENST00000529002 TRBV7-9A0A0J9YWB2 115 aa12.32□□□□□ -0.44
SSRP1-204ENST00000529002 CCSO14618 274 aa12.32□□□□□ -0.44
SSRP1-204ENST00000529002 ASAH1Q13510 395 aa12.32□□□□□ -0.44
SSRP1-204ENST00000529002 ACOT6Q3I5F7 207 aaPredicted RBP12.32□□□□□ -0.44
SSRP1-204ENST00000529002 ATP6V0E2Q8NHE4 81 aa12.32□□□□□ -0.44
SSRP1-204ENST00000529002 V9GYH0 126 aa12.32□□□□□ -0.44
SSRP1-204ENST00000529002 TYMSP04818 313 aa12.31□□□□□ -0.44
SSRP1-204ENST00000529002 FGF7P21781 194 aa12.31□□□□□ -0.44
SSRP1-204ENST00000529002 VWC2Q2TAL6 325 aa12.31□□□□□ -0.44
SSRP1-204ENST00000529002 Q8N976 141 aa12.31□□□□□ -0.44
SSRP1-204ENST00000529002 PRADC1Q9BSG0 188 aa12.31□□□□□ -0.44
SSRP1-204ENST00000529002 C20orf85Q9H1P6 137 aa12.31□□□□□ -0.44
SSRP1-204ENST00000529002 C5orf51A6NDU8 294 aa12.3□□□□□ -0.44
SSRP1-204ENST00000529002 IGLV2-11P01706 119 aa12.3□□□□□ -0.44
SSRP1-204ENST00000529002 RHOHQ15669 191 aa12.3□□□□□ -0.44
SSRP1-204ENST00000529002 FXYD5Q96DB9 178 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms