RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 EBLN2Q6P2I7 272 aa15.32■□□□□ 0.04
SMCO4-203ENST00000526869 APRG1Q8IVJ8 170 aa15.32■□□□□ 0.04
SMCO4-203ENST00000526869 LINC00482Q8N8I6 264 aa15.32■□□□□ 0.04
SMCO4-203ENST00000526869 XKRY2A2RUG3 117 aa15.31■□□□□ 0.04
SMCO4-203ENST00000526869 C1orf196B1AJZ1 125 aa15.31■□□□□ 0.04
SMCO4-203ENST00000526869 F6UB75 175 aa15.31■□□□□ 0.04
SMCO4-203ENST00000526869 PF4P02776 101 aa15.31■□□□□ 0.04
SMCO4-203ENST00000526869 COX19Q49B96 90 aa15.31■□□□□ 0.04
SMCO4-203ENST00000526869 NEU1Q99519 415 aa15.31■□□□□ 0.04
SMCO4-203ENST00000526869 SAV1Q9H4B6 383 aaPredicted RBP15.31■□□□□ 0.04
SMCO4-203ENST00000526869 TMEM189A5PLL7 270 aa15.3■□□□□ 0.04
SMCO4-203ENST00000526869 FOXA3P55318 350 aaPredicted RBP15.3■□□□□ 0.04
SMCO4-203ENST00000526869 TCL1AP56279 114 aa15.3■□□□□ 0.04
SMCO4-203ENST00000526869 DEFB1P60022 68 aa15.3■□□□□ 0.04
SMCO4-203ENST00000526869 Q6AWC8 147 aa15.3■□□□□ 0.04
SMCO4-203ENST00000526869 ZFAND2AQ8N6M9 145 aa15.3■□□□□ 0.04
SMCO4-203ENST00000526869 HIGD1CA8MV81 97 aa15.29■□□□□ 0.04
SMCO4-203ENST00000526869 IGLV1-51P01701 117 aa15.29■□□□□ 0.04
SMCO4-203ENST00000526869 RAB5BP61020 215 aa15.29■□□□□ 0.04
SMCO4-203ENST00000526869 RASL11AQ6T310 242 aa15.29■□□□□ 0.04
SMCO4-203ENST00000526869 NUP35Q8NFH5 326 aa15.29■□□□□ 0.04
SMCO4-203ENST00000526869 ZNF256Q9Y2P7 627 aaPredicted RBP15.29■□□□□ 0.04
SMCO4-203ENST00000526869 JMJD1CQ15652 2540 aa15.29■□□□□ 0.04
SMCO4-203ENST00000526869 A8MTW9 85 aa15.28■□□□□ 0.04
SMCO4-203ENST00000526869 SAP30O75446 220 aa15.28■□□□□ 0.04
SMCO4-203ENST00000526869 LEPP41159 167 aa15.28■□□□□ 0.04
SMCO4-203ENST00000526869 LINC01559Q495D7 138 aa15.28■□□□□ 0.04
SMCO4-203ENST00000526869 ATP5L2Q7Z4Y8 100 aa15.28■□□□□ 0.04
SMCO4-203ENST00000526869 GTSF1Q8WW33 167 aa15.28■□□□□ 0.04
SMCO4-203ENST00000526869 CMC4P56277 68 aaPredicted RBP15.27■□□□□ 0.04
SMCO4-203ENST00000526869 MAP6D1Q9H9H5 199 aa15.27■□□□□ 0.04
SMCO4-203ENST00000526869 KLLNB2CW77 178 aa15.26■□□□□ 0.03
SMCO4-203ENST00000526869 DEFB131AP59861 70 aa15.26■□□□□ 0.03
SMCO4-203ENST00000526869 KRTAP24-1Q3LI83 254 aa15.26■□□□□ 0.03
SMCO4-203ENST00000526869 GDF5OSQ5U4N7 250 aa15.26■□□□□ 0.03
SMCO4-203ENST00000526869 TRAV21A0A0B4J279 112 aa15.25■□□□□ 0.03
SMCO4-203ENST00000526869 MT-ND6P03923 174 aa15.25■□□□□ 0.03
SMCO4-203ENST00000526869 GPX1P07203 203 aa15.25■□□□□ 0.03
SMCO4-203ENST00000526869 HLA-DRB4P13762 266 aa15.25■□□□□ 0.03
SMCO4-203ENST00000526869 TSPOP30536 169 aa15.25■□□□□ 0.03
SMCO4-203ENST00000526869 PRR9Q5T870 116 aa15.25■□□□□ 0.03
SMCO4-203ENST00000526869 WDR73Q6P4I2 378 aa15.25■□□□□ 0.03
SMCO4-203ENST00000526869 GNB1LQ9BYB4 327 aa15.25■□□□□ 0.03
SMCO4-203ENST00000526869 HLA-DRB4X5D2U9 266 aa15.25■□□□□ 0.03
SMCO4-203ENST00000526869 TENM1Q9UKZ4 2725 aa15.25■□□□□ 0.03
SMCO4-203ENST00000526869 PHOX2AO14813 284 aa15.24■□□□□ 0.03
SMCO4-203ENST00000526869 TRGC2P03986 189 aa15.24■□□□□ 0.03
SMCO4-203ENST00000526869 ACTL10Q5JWF8 245 aa15.24■□□□□ 0.03
SMCO4-203ENST00000526869 CLUHP3Q96NS8 147 aa15.24■□□□□ 0.03
SMCO4-203ENST00000526869 WNK1Q9H4A3 2382 aa15.23■□□□□ 0.03
SMCO4-203ENST00000526869 A0A1B0GXF2 115 aa15.23■□□□□ 0.03
SMCO4-203ENST00000526869 ORM1P02763 201 aa15.23■□□□□ 0.03
SMCO4-203ENST00000526869 GZMBP10144 247 aa15.23■□□□□ 0.03
SMCO4-203ENST00000526869 CD33P20138 364 aa15.23■□□□□ 0.03
SMCO4-203ENST00000526869 INSL3P51460 131 aa15.23■□□□□ 0.03
SMCO4-203ENST00000526869 FAM110AQ9BQ89 295 aa15.23■□□□□ 0.03
SMCO4-203ENST00000526869 ATRQ13535 2644 aa15.22■□□□□ 0.03
SMCO4-203ENST00000526869 AMTNQ6UX39 209 aa15.22■□□□□ 0.03
SMCO4-203ENST00000526869 PGLYRP4Q96LB8 373 aa15.22■□□□□ 0.03
SMCO4-203ENST00000526869 A0A1B0GW15 77 aa15.21■□□□□ 0.03
SMCO4-203ENST00000526869 H3BMM0 161 aa15.21■□□□□ 0.03
SMCO4-203ENST00000526869 IGLC6P0CF74 106 aa15.21■□□□□ 0.03
SMCO4-203ENST00000526869 CTRLP40313 264 aa15.21■□□□□ 0.03
SMCO4-203ENST00000526869 BEAN1Q3B7T3 259 aa15.21■□□□□ 0.03
SMCO4-203ENST00000526869 ODF3L2Q3SX64 289 aa15.21■□□□□ 0.03
SMCO4-203ENST00000526869 MRPL54Q6P161 138 aaKnown RBP15.21■□□□□ 0.03
SMCO4-203ENST00000526869 ZNF747Q9BV97 191 aa15.21■□□□□ 0.03
SMCO4-203ENST00000526869 C11orf21Q9P2W6 132 aa15.21■□□□□ 0.03
SMCO4-203ENST00000526869 TRAPPC1Q9Y5R8 145 aa15.21■□□□□ 0.03
SMCO4-203ENST00000526869 TMSB15BA0A087X1C1 80 aa15.2■□□□□ 0.02
SMCO4-203ENST00000526869 IGKV3D-20A0A0C4DH25 116 aa15.2■□□□□ 0.02
SMCO4-203ENST00000526869 A0A1B0GUT8 65 aa15.2■□□□□ 0.02
SMCO4-203ENST00000526869 C7orf71A4D174 169 aa15.2■□□□□ 0.02
SMCO4-203ENST00000526869 SPINK4O60575 86 aa15.2■□□□□ 0.02
SMCO4-203ENST00000526869 HLA-DQA1P01909 254 aa15.2■□□□□ 0.02
SMCO4-203ENST00000526869 RNASE4P34096 147 aaKnown RBP15.2■□□□□ 0.02
SMCO4-203ENST00000526869 HBBP68871 147 aa15.2■□□□□ 0.02
SMCO4-203ENST00000526869 TMEM136Q6ZRR5 245 aa15.2■□□□□ 0.02
SMCO4-203ENST00000526869 ZNF575Q86XF7 245 aa15.2■□□□□ 0.02
SMCO4-203ENST00000526869 KNCNA6PVL3 124 aa15.19■□□□□ 0.02
SMCO4-203ENST00000526869 OR11H12B2RN74 326 aa15.19■□□□□ 0.02
SMCO4-203ENST00000526869 S100A8P05109 93 aa15.19■□□□□ 0.02
SMCO4-203ENST00000526869 CDKN1BP46527 198 aa15.19■□□□□ 0.02
SMCO4-203ENST00000526869 RIGQ13278 110 aa15.19■□□□□ 0.02
SMCO4-203ENST00000526869 C9orf66Q5T8R8 295 aa15.19■□□□□ 0.02
SMCO4-203ENST00000526869 FER1L6-AS1Q8NA97 138 aa15.19■□□□□ 0.02
SMCO4-203ENST00000526869 BORCS7Q96B45 105 aa15.19■□□□□ 0.02
SMCO4-203ENST00000526869 SNURFLB1AK76 121 aa15.18■□□□□ 0.02
SMCO4-203ENST00000526869 PRIMA1Q86XR5 153 aa15.18■□□□□ 0.02
SMCO4-203ENST00000526869 ZFP82Q8N141 532 aa15.18■□□□□ 0.02
SMCO4-203ENST00000526869 FRZBQ92765 325 aa15.18■□□□□ 0.02
SMCO4-203ENST00000526869 MCRIP2Q9BUT9 160 aaKnown RBP15.18■□□□□ 0.02
SMCO4-203ENST00000526869 F2Z2F3 143 aa15.17■□□□□ 0.02
SMCO4-203ENST00000526869 J3KRW8 73 aa15.17■□□□□ 0.02
SMCO4-203ENST00000526869 FRMD6-AS1P0C7T7 363 aa15.17■□□□□ 0.02
SMCO4-203ENST00000526869 FABP9Q0Z7S8 132 aa15.17■□□□□ 0.02
SMCO4-203ENST00000526869 DNLZQ5SXM8 178 aa15.17■□□□□ 0.02
SMCO4-203ENST00000526869 GATD1Q8NB37 220 aa15.17■□□□□ 0.02
SMCO4-203ENST00000526869 CNFNQ9BYD5 112 aa15.17■□□□□ 0.02
SMCO4-203ENST00000526869 MRPL18Q9H0U6 180 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms