RNA–Protein interactions for RNA: ENST00000526457.3

LRRK1-205, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 11,632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-205ENST00000526457 LHFPL1Q86WI0 220 aa6.28□□□□□ -1.4
LRRK1-205ENST00000526457 THAP8Q8NA92 274 aa6.28□□□□□ -1.4
LRRK1-205ENST00000526457 TIAF1O95411 115 aa6.28□□□□□ -1.4
LRRK1-205ENST00000526457 TRPT1Q86TN4 253 aaKnown RBP6.28□□□□□ -1.4
LRRK1-205ENST00000526457 ITGBL1O95965 494 aaPredicted RBP6.28□□□□□ -1.4
LRRK1-205ENST00000526457 NDPQ00604 133 aa6.28□□□□□ -1.4
LRRK1-205ENST00000526457 PRSS46E5RG02 174 aa6.27□□□□□ -1.4
LRRK1-205ENST00000526457 NDUFS7O75251 213 aa6.27□□□□□ -1.4
LRRK1-205ENST00000526457 NTF4P34130 210 aa6.27□□□□□ -1.4
LRRK1-205ENST00000526457 IGHV1-45A0A0A0MS14 117 aa6.27□□□□□ -1.41
LRRK1-205ENST00000526457 FOXI1Q12951 378 aa6.27□□□□□ -1.41
LRRK1-205ENST00000526457 EPG5Q9HCE0 2579 aa6.27□□□□□ -1.41
LRRK1-205ENST00000526457 SMIM27A0A1W2PRY6 76 aa6.27□□□□□ -1.41
LRRK1-205ENST00000526457 SPSB3Q6PJ21 355 aa6.27□□□□□ -1.41
LRRK1-205ENST00000526457 IGFBPL1Q8WX77 278 aa6.27□□□□□ -1.41
LRRK1-205ENST00000526457 DKK2Q9UBU2 259 aa6.27□□□□□ -1.41
LRRK1-205ENST00000526457 Q6ZUT4 128 aa6.27□□□□□ -1.41
LRRK1-205ENST00000526457 WFDC11Q8NEX6 87 aa6.27□□□□□ -1.41
LRRK1-205ENST00000526457 PLA2G2FQ9BZM2 168 aa6.27□□□□□ -1.41
LRRK1-205ENST00000526457 TRBV19A0A075B6N1 114 aa6.27□□□□□ -1.41
LRRK1-205ENST00000526457 NDUFC2-KCTD14E9PQ53 114 aa6.27□□□□□ -1.41
LRRK1-205ENST00000526457 FAM201AQ5SY85 155 aa6.27□□□□□ -1.41
LRRK1-205ENST00000526457 LYPD1Q8N2G4 141 aa6.27□□□□□ -1.41
LRRK1-205ENST00000526457 TIMM23O14925 209 aa6.26□□□□□ -1.41
LRRK1-205ENST00000526457 ATP5J2P56134 94 aa6.26□□□□□ -1.41
LRRK1-205ENST00000526457 C15orf32Q32M92 178 aa6.26□□□□□ -1.41
LRRK1-205ENST00000526457 RNF166Q96A37 237 aaPredicted RBP6.26□□□□□ -1.41
LRRK1-205ENST00000526457 IGKV1-5P01602 117 aa6.26□□□□□ -1.41
LRRK1-205ENST00000526457 CXCL5P42830 114 aa6.26□□□□□ -1.41
LRRK1-205ENST00000526457 ZFP2Q6ZN57 461 aa6.26□□□□□ -1.41
LRRK1-205ENST00000526457 IGHV3-53P01767 116 aa6.26□□□□□ -1.41
LRRK1-205ENST00000526457 YPEL3P61236 119 aaPredicted RBP6.26□□□□□ -1.41
LRRK1-205ENST00000526457 LINC01545Q5VT33 79 aa6.26□□□□□ -1.41
LRRK1-205ENST00000526457 CYYR1Q96J86 154 aa6.26□□□□□ -1.41
LRRK1-205ENST00000526457 PTPRSQ13332 1948 aa6.26□□□□□ -1.41
LRRK1-205ENST00000526457 LINC00477Q96M19 166 aa6.26□□□□□ -1.41
LRRK1-205ENST00000526457 ZIC4Q8N9L1 334 aa6.26□□□□□ -1.41
LRRK1-205ENST00000526457 TMEM75Q8N9X5 138 aa6.26□□□□□ -1.41
LRRK1-205ENST00000526457 FAM236DA0A1B0GTK5 79 aa6.26□□□□□ -1.41
LRRK1-205ENST00000526457 A0A1W2PRX2 142 aa6.26□□□□□ -1.41
LRRK1-205ENST00000526457 FAM236CP0DP71 79 aa6.26□□□□□ -1.41
LRRK1-205ENST00000526457 ZNF501Q96CX3 271 aaPredicted RBP6.26□□□□□ -1.41
LRRK1-205ENST00000526457 B9A039 149 aa6.26□□□□□ -1.41
LRRK1-205ENST00000526457 CRYGCP07315 174 aa6.26□□□□□ -1.41
LRRK1-205ENST00000526457 PAQR4Q8N4S7 273 aaPredicted RBP6.26□□□□□ -1.41
LRRK1-205ENST00000526457 CECR9P0C854 216 aa6.25□□□□□ -1.41
LRRK1-205ENST00000526457 IGKV1-9A0A0C4DH69 117 aa6.25□□□□□ -1.41
LRRK1-205ENST00000526457 I3L3M4 83 aa6.25□□□□□ -1.41
LRRK1-205ENST00000526457 ATP6V0E2Q8NHE4 81 aa6.25□□□□□ -1.41
LRRK1-205ENST00000526457 C15orf62A8K5M9 175 aa6.25□□□□□ -1.41
LRRK1-205ENST00000526457 LYPD3O95274 346 aa6.25□□□□□ -1.41
LRRK1-205ENST00000526457 FGFBP3Q8TAT2 258 aa6.25□□□□□ -1.41
LRRK1-205ENST00000526457 TMEM92Q6UXU6 159 aa6.25□□□□□ -1.41
LRRK1-205ENST00000526457 FUSP35637 526 aaKnown RBP eCLIP6.25□□□□□ -1.41
LRRK1-205ENST00000526457 CFHR4Q92496 578 aa6.25□□□□□ -1.41
LRRK1-205ENST00000526457 C8orf49Q96NF6 230 aa6.25□□□□□ -1.41
LRRK1-205ENST00000526457 ICOSQ9Y6W8 199 aa6.25□□□□□ -1.41
LRRK1-205ENST00000526457 C16orf54Q6UWD8 224 aa6.25□□□□□ -1.41
LRRK1-205ENST00000526457 DEFB124Q8NES8 71 aa6.25□□□□□ -1.41
LRRK1-205ENST00000526457 WIPF2Q8TF74 440 aaPredicted RBP6.25□□□□□ -1.41
LRRK1-205ENST00000526457 V9GYV3 84 aa6.25□□□□□ -1.41
LRRK1-205ENST00000526457 ANKRD17O75179 2603 aaKnown RBP6.25□□□□□ -1.41
LRRK1-205ENST00000526457 C4orf51C9J302 202 aa6.25□□□□□ -1.41
LRRK1-205ENST00000526457 PRRC2CQ9Y520 2896 aaKnown RBP6.25□□□□□ -1.41
LRRK1-205ENST00000526457 CCL3L1P16619 93 aa6.25□□□□□ -1.41
LRRK1-205ENST00000526457 IGHV1OR15-1A0A075B7D0 117 aa6.24□□□□□ -1.41
LRRK1-205ENST00000526457 NTN3O00634 580 aaPredicted RBP6.24□□□□□ -1.41
LRRK1-205ENST00000526457 Q6ZT83 130 aa6.24□□□□□ -1.41
LRRK1-205ENST00000526457 HS3ST6Q96QI5 342 aa6.24□□□□□ -1.41
LRRK1-205ENST00000526457 IGKV1D-43A0A0B4J1Z2 117 aa6.24□□□□□ -1.41
LRRK1-205ENST00000526457 C10orf55Q5SWW7 151 aa6.24□□□□□ -1.41
LRRK1-205ENST00000526457 UQCRQO14949 82 aa6.24□□□□□ -1.41
LRRK1-205ENST00000526457 SP7Q8TDD2 431 aaPredicted RBP6.24□□□□□ -1.41
LRRK1-205ENST00000526457 LYZL4Q96KX0 146 aa6.24□□□□□ -1.41
LRRK1-205ENST00000526457 CLUHP3Q96NS8 147 aa6.24□□□□□ -1.41
LRRK1-205ENST00000526457 NXPH4O95158 308 aa6.24□□□□□ -1.41
LRRK1-205ENST00000526457 TRIP6Q15654 476 aaKnown RBP6.24□□□□□ -1.41
LRRK1-205ENST00000526457 Q6ZS49 121 aa6.24□□□□□ -1.41
LRRK1-205ENST00000526457 RNF152Q8N8N0 203 aa6.24□□□□□ -1.41
LRRK1-205ENST00000526457 RPP25Q9BUL9 199 aaKnown RBP6.24□□□□□ -1.41
LRRK1-205ENST00000526457 LRP4O75096 1905 aa6.24□□□□□ -1.41
LRRK1-205ENST00000526457 IGLV3-32A0A0A0MS00 114 aa6.24□□□□□ -1.41
LRRK1-205ENST00000526457 PROP1O75360 226 aa6.24□□□□□ -1.41
LRRK1-205ENST00000526457 CELA3BP08861 270 aa6.24□□□□□ -1.41
LRRK1-205ENST00000526457 PDE6HQ13956 83 aa6.24□□□□□ -1.41
LRRK1-205ENST00000526457 TRAV26-2A0A0B4J265 109 aa6.24□□□□□ -1.41
LRRK1-205ENST00000526457 UCNP55089 124 aa6.24□□□□□ -1.41
LRRK1-205ENST00000526457 COLCA1Q6ZS62 124 aa6.24□□□□□ -1.41
LRRK1-205ENST00000526457 MT-ATP8P03928 68 aa6.23□□□□□ -1.41
LRRK1-205ENST00000526457 SMRP1Q8NCR6 262 aa6.23□□□□□ -1.41
LRRK1-205ENST00000526457 CCL19Q99731 98 aa6.23□□□□□ -1.41
LRRK1-205ENST00000526457 TRAV3A0A0B4J244 114 aa6.23□□□□□ -1.41
LRRK1-205ENST00000526457 HERVK_113P63121 156 aa6.23□□□□□ -1.41
LRRK1-205ENST00000526457 PSG7Q13046 419 aa6.23□□□□□ -1.41
LRRK1-205ENST00000526457 C9orf139Q6ZV77 190 aa6.23□□□□□ -1.41
LRRK1-205ENST00000526457 C3orf22Q8N5N4 141 aa6.23□□□□□ -1.41
LRRK1-205ENST00000526457 SMIM2Q9BVW6 85 aa6.23□□□□□ -1.41
LRRK1-205ENST00000526457 COA6Q5JTJ3 125 aaKnown RBP6.23□□□□□ -1.41
LRRK1-205ENST00000526457 C1orf210Q8IVY1 113 aa6.23□□□□□ -1.41
LRRK1-205ENST00000526457 EFNA4P52798 201 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms