RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 LINC00479Q96M42 142 aa7.81□□□□□ -1.16
NEDD8-204ENST00000526430 X6R8D5 127 aa7.81□□□□□ -1.16
NEDD8-204ENST00000526430 NACAE9PAV3 2078 aa7.81□□□□□ -1.16
NEDD8-204ENST00000526430 TRAV12-2A0A075B6T6 113 aa7.8□□□□□ -1.16
NEDD8-204ENST00000526430 ZNF705EA8MWA4 302 aaPredicted RBP7.8□□□□□ -1.16
NEDD8-204ENST00000526430 SLC25A5P05141 298 aaKnown RBP7.8□□□□□ -1.16
NEDD8-204ENST00000526430 CRISP2P16562 243 aa7.8□□□□□ -1.16
NEDD8-204ENST00000526430 SPINK13Q1W4C9 94 aa7.8□□□□□ -1.16
NEDD8-204ENST00000526430 SOHLH1Q5JUK2 328 aa7.8□□□□□ -1.16
NEDD8-204ENST00000526430 ZNF705AQ6ZN79 300 aaPredicted RBP7.8□□□□□ -1.16
NEDD8-204ENST00000526430 C5orf17Q8NAS9 161 aa7.8□□□□□ -1.16
NEDD8-204ENST00000526430 PCNPQ8WW12 178 aaKnown RBP7.8□□□□□ -1.16
NEDD8-204ENST00000526430 LINC00477Q96M19 166 aa7.8□□□□□ -1.16
NEDD8-204ENST00000526430 ODF3Q96PU9 254 aa7.8□□□□□ -1.16
NEDD8-204ENST00000526430 KLLNB2CW77 178 aa7.79□□□□□ -1.16
NEDD8-204ENST00000526430 M0R2N4 97 aa7.79□□□□□ -1.16
NEDD8-204ENST00000526430 ZNF324O75467 553 aaPredicted RBP7.79□□□□□ -1.16
NEDD8-204ENST00000526430 P0DMU3 169 aa7.79□□□□□ -1.16
NEDD8-204ENST00000526430 FAM231AP0DMU4 169 aa7.79□□□□□ -1.16
NEDD8-204ENST00000526430 FAM231CP0DMU5 169 aa7.79□□□□□ -1.16
NEDD8-204ENST00000526430 Q6ZR54 194 aa7.79□□□□□ -1.16
NEDD8-204ENST00000526430 GOLT1AQ6ZVE7 132 aa7.79□□□□□ -1.16
NEDD8-204ENST00000526430 IQCF2Q8IXL9 164 aa7.79□□□□□ -1.16
NEDD8-204ENST00000526430 OR10J6PQ8NGY7 276 aa7.79□□□□□ -1.16
NEDD8-204ENST00000526430 Q8TAT8 98 aa7.79□□□□□ -1.16
NEDD8-204ENST00000526430 SGK494Q96LW2 274 aa7.79□□□□□ -1.16
NEDD8-204ENST00000526430 KRTAP3-3Q9BYR6 98 aa7.79□□□□□ -1.16
NEDD8-204ENST00000526430 KRTAP3-2Q9BYR7 98 aa7.79□□□□□ -1.16
NEDD8-204ENST00000526430 KLF12Q9Y4X4 402 aa7.79□□□□□ -1.16
NEDD8-204ENST00000526430 ARL2-SNX15V9GYD0 113 aa7.79□□□□□ -1.16
NEDD8-204ENST00000526430 MYCBP2O75592 4640 aa7.79□□□□□ -1.16
NEDD8-204ENST00000526430 IGHV4-4A0A075B6R2 117 aa7.78□□□□□ -1.16
NEDD8-204ENST00000526430 TRAV34A0A0B4J273 112 aa7.78□□□□□ -1.16
NEDD8-204ENST00000526430 NMBP08949 121 aa7.78□□□□□ -1.16
NEDD8-204ENST00000526430 ZNF138P52744 262 aa7.78□□□□□ -1.16
NEDD8-204ENST00000526430 BLOC1S1P78537 153 aa7.78□□□□□ -1.16
NEDD8-204ENST00000526430 GFI1BQ5VTD9 330 aa7.78□□□□□ -1.16
NEDD8-204ENST00000526430 IGF2BP2-AS1Q96M15 143 aa7.78□□□□□ -1.16
NEDD8-204ENST00000526430 RARRES2Q99969 163 aa7.78□□□□□ -1.16
NEDD8-204ENST00000526430 DNAH5Q8TE73 4624 aa7.77□□□□□ -1.16
NEDD8-204ENST00000526430 TRBV7-9A0A0J9YWB2 115 aa7.77□□□□□ -1.17
NEDD8-204ENST00000526430 HBE1P02100 147 aa7.77□□□□□ -1.17
NEDD8-204ENST00000526430 CDKN1BP46527 198 aa7.77□□□□□ -1.17
NEDD8-204ENST00000526430 CSN1S1P47710 185 aa7.77□□□□□ -1.17
NEDD8-204ENST00000526430 NUTF2P61970 127 aaKnown RBP7.77□□□□□ -1.17
NEDD8-204ENST00000526430 CST9LP1Q5W188 147 aa7.77□□□□□ -1.17
NEDD8-204ENST00000526430 OR11H2Q8NH07 326 aa7.77□□□□□ -1.17
NEDD8-204ENST00000526430 ATG101Q9BSB4 218 aa7.77□□□□□ -1.17
NEDD8-204ENST00000526430 NKX6-2Q9C056 277 aaPredicted RBP7.77□□□□□ -1.17
NEDD8-204ENST00000526430 GNG13Q9P2W3 67 aa7.77□□□□□ -1.17
NEDD8-204ENST00000526430 RPH3ALQ9UNE2 315 aa7.77□□□□□ -1.17
NEDD8-204ENST00000526430 FLG2Q5D862 2391 aaPredicted RBP7.77□□□□□ -1.17
NEDD8-204ENST00000526430 LOC102723971A0A1B0GUV8 181 aa7.76□□□□□ -1.17
NEDD8-204ENST00000526430 PEX7O00628 323 aa7.76□□□□□ -1.17
NEDD8-204ENST00000526430 AMBPP02760 352 aa7.76□□□□□ -1.17
NEDD8-204ENST00000526430 AZU1P20160 251 aa7.76□□□□□ -1.17
NEDD8-204ENST00000526430 ZNF80P51504 273 aaPredicted RBP7.76□□□□□ -1.17
NEDD8-204ENST00000526430 BTN1A1Q13410 526 aa7.76□□□□□ -1.17
NEDD8-204ENST00000526430 CYB561D1Q8N8Q1 229 aa7.76□□□□□ -1.17
NEDD8-204ENST00000526430 Q8NAQ8 132 aa7.76□□□□□ -1.17
NEDD8-204ENST00000526430 CMTM2Q8TAZ6 248 aa7.76□□□□□ -1.17
NEDD8-204ENST00000526430 HIST1H2BAQ96A08 127 aa7.76□□□□□ -1.17
NEDD8-204ENST00000526430 C11orf52Q96A22 123 aa7.76□□□□□ -1.17
NEDD8-204ENST00000526430 C8orf49Q96NF6 230 aa7.76□□□□□ -1.17
NEDD8-204ENST00000526430 NEU1Q99519 415 aa7.76□□□□□ -1.17
NEDD8-204ENST00000526430 C1QTNF4Q9BXJ3 329 aa7.76□□□□□ -1.17
NEDD8-204ENST00000526430 PSG8Q9UQ74 426 aa7.76□□□□□ -1.17
NEDD8-204ENST00000526430 LENEPQ9Y5L5 61 aa7.76□□□□□ -1.17
NEDD8-204ENST00000526430 TRAV10A0A0B4J240 114 aa7.75□□□□□ -1.17
NEDD8-204ENST00000526430 TRBV6-1A0A0K0K1D8 114 aa7.75□□□□□ -1.17
NEDD8-204ENST00000526430 SERTM2A0A1B0GWG4 89 aa7.75□□□□□ -1.17
NEDD8-204ENST00000526430 SCO2A0A1W2PP80 73 aa7.75□□□□□ -1.17
NEDD8-204ENST00000526430 PLAC8L1A1L4L8 177 aa7.75□□□□□ -1.17
NEDD8-204ENST00000526430 J3KRW8 73 aa7.75□□□□□ -1.17
NEDD8-204ENST00000526430 IFNA7P01567 189 aa7.75□□□□□ -1.17
NEDD8-204ENST00000526430 BCL2P10415 239 aa7.75□□□□□ -1.17
NEDD8-204ENST00000526430 CRIP1P50238 77 aa7.75□□□□□ -1.17
NEDD8-204ENST00000526430 PPT1P50897 306 aa7.75□□□□□ -1.17
NEDD8-204ENST00000526430 FLI1Q01543 452 aaPredicted RBP7.75□□□□□ -1.17
NEDD8-204ENST00000526430 TMEM78Q5T7P6 136 aa7.75□□□□□ -1.17
NEDD8-204ENST00000526430 COX8CQ7Z4L0 72 aa7.75□□□□□ -1.17
NEDD8-204ENST00000526430 TMEM75Q8N9X5 138 aa7.75□□□□□ -1.17
NEDD8-204ENST00000526430 DERL1Q9BUN8 251 aa7.75□□□□□ -1.17
NEDD8-204ENST00000526430 MANBALQ9NQG1 85 aa7.75□□□□□ -1.17
NEDD8-204ENST00000526430 TRAV12-3A0A0B4J271 114 aa7.74□□□□□ -1.17
NEDD8-204ENST00000526430 IGHV4-28A0A0C4DH34 117 aa7.74□□□□□ -1.17
NEDD8-204ENST00000526430 EPM2AB3EWF7 344 aa7.74□□□□□ -1.17
NEDD8-204ENST00000526430 C9JQL5 133 aa7.74□□□□□ -1.17
NEDD8-204ENST00000526430 INAFM2P0DMQ5 153 aa7.74□□□□□ -1.17
NEDD8-204ENST00000526430 RNASE4P34096 147 aaKnown RBP7.74□□□□□ -1.17
NEDD8-204ENST00000526430 LEPP41159 167 aa7.74□□□□□ -1.17
NEDD8-204ENST00000526430 SRSF3P84103 164 aaKnown RBP7.74□□□□□ -1.17
NEDD8-204ENST00000526430 TMEM183BQ1AE95 376 aa7.74□□□□□ -1.17
NEDD8-204ENST00000526430 ZNF506Q5JVG8 444 aa7.74□□□□□ -1.17
NEDD8-204ENST00000526430 TCEAL7Q9BRU2 100 aa7.74□□□□□ -1.17
NEDD8-204ENST00000526430 C11orf21Q9P2W6 132 aa7.74□□□□□ -1.17
NEDD8-204ENST00000526430 TRBV20OR9-2A0A075B6H5 130 aa7.73□□□□□ -1.17
NEDD8-204ENST00000526430 C7orf71A4D174 169 aa7.73□□□□□ -1.17
NEDD8-204ENST00000526430 RBFOX3A6NFN3 312 aa7.73□□□□□ -1.17
NEDD8-204ENST00000526430 ZNF705GA8MUZ8 300 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms