RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 GFERP55789 205 aa3.91□□□□□ -1.78
C11orf54-203ENST00000526335 ERVK-16P61578 105 aa3.91□□□□□ -1.78
C11orf54-203ENST00000526335 ZNF146Q15072 292 aa3.91□□□□□ -1.78
C11orf54-203ENST00000526335 TTC32Q5I0X7 151 aa3.91□□□□□ -1.78
C11orf54-203ENST00000526335 AAED1Q7RTV5 226 aa3.91□□□□□ -1.78
C11orf54-203ENST00000526335 RPS19BP1Q86WX3 136 aaKnown RBP3.91□□□□□ -1.78
C11orf54-203ENST00000526335 C17orf82Q86X59 251 aaPredicted RBP3.91□□□□□ -1.78
C11orf54-203ENST00000526335 RPRMLQ8N4K4 120 aa3.91□□□□□ -1.78
C11orf54-203ENST00000526335 C8orf46Q8TAG6 207 aa3.91□□□□□ -1.78
C11orf54-203ENST00000526335 GTSF1Q8WW33 167 aa3.91□□□□□ -1.78
C11orf54-203ENST00000526335 TMEM190Q8WZ59 177 aa3.91□□□□□ -1.78
C11orf54-203ENST00000526335 RAB37Q96AX2 223 aa3.91□□□□□ -1.78
C11orf54-203ENST00000526335 EEF1AKMT3Q96AZ1 226 aa3.91□□□□□ -1.78
C11orf54-203ENST00000526335 FAM218AQ96MZ4 157 aa3.91□□□□□ -1.78
C11orf54-203ENST00000526335 RPP21Q9H633 154 aaKnown RBP3.91□□□□□ -1.78
C11orf54-203ENST00000526335 ZNF355PQ9NSJ1 428 aa3.91□□□□□ -1.78
C11orf54-203ENST00000526335 LAMTOR3Q9UHA4 124 aa3.91□□□□□ -1.78
C11orf54-203ENST00000526335 AMMECR1Q9Y4X0 333 aaPredicted RBP3.91□□□□□ -1.78
C11orf54-203ENST00000526335 INSIG2Q9Y5U4 225 aa3.91□□□□□ -1.78
C11orf54-203ENST00000526335 SMAD5-AS1Q9Y6J3 95 aa3.91□□□□□ -1.78
C11orf54-203ENST00000526335 ANKRD11Q6UB99 2663 aaPredicted RBP3.91□□□□□ -1.78
C11orf54-203ENST00000526335 CEP250Q9BV73 2442 aa3.91□□□□□ -1.78
C11orf54-203ENST00000526335 IGHV3-15A0A0B4J1V0 119 aa3.9□□□□□ -1.78
C11orf54-203ENST00000526335 IGHV3-20A0A0C4DH32 117 aa3.9□□□□□ -1.78
C11orf54-203ENST00000526335 A0A0J9YW62 118 aa3.9□□□□□ -1.78
C11orf54-203ENST00000526335 E9PLD3 99 aa3.9□□□□□ -1.78
C11orf54-203ENST00000526335 PRSS1P07477 247 aa3.9□□□□□ -1.78
C11orf54-203ENST00000526335 PATE4P0C8F1 98 aa3.9□□□□□ -1.78
C11orf54-203ENST00000526335 IGLC6P0CF74 106 aa3.9□□□□□ -1.78
C11orf54-203ENST00000526335 HLA-DRB4P13762 266 aa3.9□□□□□ -1.78
C11orf54-203ENST00000526335 GABRG2P18507 467 aa3.9□□□□□ -1.78
C11orf54-203ENST00000526335 UBE2E1P51965 193 aa3.9□□□□□ -1.78
C11orf54-203ENST00000526335 KLRD1Q13241 179 aa3.9□□□□□ -1.78
C11orf54-203ENST00000526335 SPINK9Q5DT21 86 aa3.9□□□□□ -1.78
C11orf54-203ENST00000526335 LYRM7Q5U5X0 104 aa3.9□□□□□ -1.78
C11orf54-203ENST00000526335 Q6Q795 121 aa3.9□□□□□ -1.78
C11orf54-203ENST00000526335 KRTAP7-1Q8IUC3 87 aa3.9□□□□□ -1.78
C11orf54-203ENST00000526335 OR9G1Q8NH87 305 aa3.9□□□□□ -1.78
C11orf54-203ENST00000526335 ZC2HC1AQ96GY0 325 aa3.9□□□□□ -1.78
C11orf54-203ENST00000526335 PRAC1Q96KF2 57 aa3.9□□□□□ -1.78
C11orf54-203ENST00000526335 UBE2E2Q96LR5 201 aa3.9□□□□□ -1.78
C11orf54-203ENST00000526335 JPT2Q9H910 190 aa3.9□□□□□ -1.78
C11orf54-203ENST00000526335 HILPDAQ9Y5L2 63 aa3.9□□□□□ -1.78
C11orf54-203ENST00000526335 HLA-DRB4X5D2U9 266 aa3.9□□□□□ -1.78
C11orf54-203ENST00000526335 DOCK8Q8NF50 2099 aa3.9□□□□□ -1.78
C11orf54-203ENST00000526335 DNAH12Q6ZR08 3092 aa3.9□□□□□ -1.79
C11orf54-203ENST00000526335 ARID1AO14497 2285 aa3.9□□□□□ -1.79
C11orf54-203ENST00000526335 FLNBO75369 2602 aaKnown RBP3.9□□□□□ -1.79
C11orf54-203ENST00000526335 C19orf71A6NCJ1 209 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 C12orf77C9JDV5 145 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 K7ENP7 123 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 CCL21O00585 134 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 DPM2O94777 84 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 P01737 135 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 FOXA3P55318 350 aaPredicted RBP3.89□□□□□ -1.79
C11orf54-203ENST00000526335 LINC01547P58512 204 aaPredicted RBP3.89□□□□□ -1.79
C11orf54-203ENST00000526335 RPL18AQ02543 176 aaKnown RBP3.89□□□□□ -1.79
C11orf54-203ENST00000526335 RIGQ13278 110 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 HRCT1Q6UXD1 115 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 Q6ZR03 302 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 C9orf85Q96MD7 179 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 RTL8AQ9BWD3 113 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 DEFB126Q9BYW3 111 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 PLA2G2FQ9BZM2 168 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 KLF13Q9Y2Y9 288 aaPredicted RBP3.89□□□□□ -1.79
C11orf54-203ENST00000526335 LINC00312Q9Y6C7 94 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 CHCHD2Q9Y6H1 151 aaPredicted RBP3.89□□□□□ -1.79
C11orf54-203ENST00000526335 TNRC6BQ9UPQ9 1833 aaKnown RBP3.89□□□□□ -1.79
C11orf54-203ENST00000526335 SHANK1Q9Y566 2161 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 WDFY4Q6ZS81 3184 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 EXPH5Q8NEV8 1989 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 CHD9Q3L8U1 2897 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 MYO7AQ13402 2215 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 USP34Q70CQ2 3546 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 UNC79Q9P2D8 2635 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 IGHV4-4A0A075B6R2 117 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 LOC107984640A0A0U1RRK4 108 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 IGLL5B9A064 214 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 CCDC179H3BU77 68 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 K7EMT4 169 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 OVOL1O14753 267 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 MRPS12O15235 138 aaKnown RBP3.89□□□□□ -1.79
C11orf54-203ENST00000526335 IGHV4-34P06331 123 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 IFITM1P13164 125 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 NDUFV3P56181 108 aaKnown RBP3.89□□□□□ -1.79
C11orf54-203ENST00000526335 UBE2L3P68036 154 aaKnown RBP3.89□□□□□ -1.79
C11orf54-203ENST00000526335 HES1Q14469 280 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 WFDC2Q14508 124 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 FAM201AQ5SY85 155 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 SH2D6Q7Z4S9 175 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 C11orf45Q8TAV5 145 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 FMC1Q96HJ9 113 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 FAM167A-AS1Q96KT0 104 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 ZNF714Q96N38 554 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 NAA38Q9BRA0 125 aaKnown RBP3.89□□□□□ -1.79
C11orf54-203ENST00000526335 SLC25A2Q9BXI2 301 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 SRXN1Q9BYN0 137 aa3.89□□□□□ -1.79
C11orf54-203ENST00000526335 ZNF71Q9NQZ8 489 aaPredicted RBP3.89□□□□□ -1.79
C11orf54-203ENST00000526335 TNRC6AQ8NDV7 1962 aaKnown RBP3.89□□□□□ -1.79
C11orf54-203ENST00000526335 ALPK2Q86TB3 2170 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms