RNA–Protein interactions for RNA: ENST00000525537.2

ATM-208, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-208ENST00000525537 PRG4Q92954 1404 aaPredicted RBP2.39□□□□□ -2.03
ATM-208ENST00000525537 TNRC6AQ8NDV7 1962 aaKnown RBP2.39□□□□□ -2.03
ATM-208ENST00000525537 SYNJ1O43426 1573 aa2.39□□□□□ -2.03
ATM-208ENST00000525537 ADGRB2O60241 1585 aa2.39□□□□□ -2.03
ATM-208ENST00000525537 ALPK3Q96L96 1907 aa2.38□□□□□ -2.03
ATM-208ENST00000525537 LOC107984156A0A0G2JMH3 177 aa2.38□□□□□ -2.03
ATM-208ENST00000525537 H3BRM9 83 aa2.38□□□□□ -2.03
ATM-208ENST00000525537 NCR2O95944 276 aa2.38□□□□□ -2.03
ATM-208ENST00000525537 CD3DP04234 171 aa2.38□□□□□ -2.03
ATM-208ENST00000525537 NCS1P62166 190 aa2.38□□□□□ -2.03
ATM-208ENST00000525537 ARL17AQ8IVW1 177 aa2.38□□□□□ -2.03
ATM-208ENST00000525537 C10orf111Q8N326 155 aa2.38□□□□□ -2.03
ATM-208ENST00000525537 OR10AC1Q8NH08 325 aa2.38□□□□□ -2.03
ATM-208ENST00000525537 CHD3Q12873 2000 aaKnown RBP2.37□□□□□ -2.03
ATM-208ENST00000525537 IFITM5A6NNB3 132 aa2.37□□□□□ -2.03
ATM-208ENST00000525537 IGHV3-33P01772 117 aa2.37□□□□□ -2.03
ATM-208ENST00000525537 KDELR1P24390 212 aa2.37□□□□□ -2.03
ATM-208ENST00000525537 DNAJB13P59910 316 aa2.37□□□□□ -2.03
ATM-208ENST00000525537 CCSMST1Q4G0I0 132 aa2.37□□□□□ -2.03
ATM-208ENST00000525537 SLC35B3Q9H1N7 401 aa2.37□□□□□ -2.03
ATM-208ENST00000525537 ERG28Q9UKR5 140 aa2.37□□□□□ -2.03
ATM-208ENST00000525537 SIP14410 1827 aa2.37□□□□□ -2.03
ATM-208ENST00000525537 IGHV1-24A0A0C4DH33 117 aa2.36□□□□□ -2.03
ATM-208ENST00000525537 A6NN06 94 aa2.36□□□□□ -2.03
ATM-208ENST00000525537 K7EP13 123 aa2.36□□□□□ -2.03
ATM-208ENST00000525537 CCL25O15444 150 aa2.36□□□□□ -2.03
ATM-208ENST00000525537 EDF1O60869 148 aaKnown RBP2.36□□□□□ -2.03
ATM-208ENST00000525537 RPS25P62851 125 aaKnown RBP2.36□□□□□ -2.03
ATM-208ENST00000525537 WDR97A6NE52 1622 aa2.35□□□□□ -2.03
ATM-208ENST00000525537 MYO18AQ92614 2054 aaKnown RBP2.35□□□□□ -2.03
ATM-208ENST00000525537 FGD6Q6ZV73 1430 aa2.35□□□□□ -2.03
ATM-208ENST00000525537 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.35□□□□□ -2.03
ATM-208ENST00000525537 K7ERU9 68 aa2.35□□□□□ -2.03
ATM-208ENST00000525537 IZUMO2Q6UXV1 221 aa2.35□□□□□ -2.03
ATM-208ENST00000525537 SMIM7Q9BQ49 75 aa2.35□□□□□ -2.03
ATM-208ENST00000525537 LPAR5Q9H1C0 372 aa2.35□□□□□ -2.03
ATM-208ENST00000525537 KIAA1549LQ6ZVL6 1849 aa2.35□□□□□ -2.03
ATM-208ENST00000525537 MCM3APO60318 1980 aa2.34□□□□□ -2.03
ATM-208ENST00000525537 FAM236AA0A1B0GUQ0 79 aa2.34□□□□□ -2.03
ATM-208ENST00000525537 FAM236BA0A1B0GV22 79 aa2.34□□□□□ -2.03
ATM-208ENST00000525537 SULT1C4O75897 302 aa2.34□□□□□ -2.03
ATM-208ENST00000525537 NEDD8Q15843 81 aa2.34□□□□□ -2.03
ATM-208ENST00000525537 C5orf17Q8NAS9 161 aa2.34□□□□□ -2.03
ATM-208ENST00000525537 HELZP42694 1942 aaKnown RBP2.33□□□□□ -2.04
ATM-208ENST00000525537 IGKV3-7A0A075B6H7 116 aa2.33□□□□□ -2.04
ATM-208ENST00000525537 IGKV2-40A0A087WW87 121 aaPredicted RBP2.33□□□□□ -2.04
ATM-208ENST00000525537 NPFFO15130 113 aa2.33□□□□□ -2.04
ATM-208ENST00000525537 YPEL1O60688 119 aa2.33□□□□□ -2.04
ATM-208ENST00000525537 IGKV2D-40P01614 121 aaPredicted RBP2.33□□□□□ -2.04
ATM-208ENST00000525537 RBP4P02753 201 aa2.33□□□□□ -2.04
ATM-208ENST00000525537 PLGLB1Q02325 96 aa2.33□□□□□ -2.04
ATM-208ENST00000525537 CLLU1Q5K131 121 aa2.33□□□□□ -2.04
ATM-208ENST00000525537 TMEM14CQ9P0S9 112 aa2.33□□□□□ -2.04
ATM-208ENST00000525537 NINQ8N4C6 2090 aa2.32□□□□□ -2.04
ATM-208ENST00000525537 GEMIN2O14893 280 aaKnown RBP2.32□□□□□ -2.04
ATM-208ENST00000525537 DNAL4O96015 105 aa2.32□□□□□ -2.04
ATM-208ENST00000525537 ZNF25P17030 456 aaPredicted RBP2.32□□□□□ -2.04
ATM-208ENST00000525537 COPZ1P61923 177 aa2.32□□□□□ -2.04
ATM-208ENST00000525537 SPRNQ5BIV9 151 aa2.32□□□□□ -2.04
ATM-208ENST00000525537 LINC00322Q6ZN03 302 aaPredicted RBP2.32□□□□□ -2.04
ATM-208ENST00000525537 DEFB119Q8N690 84 aa2.32□□□□□ -2.04
ATM-208ENST00000525537 ZFP30Q9Y2G7 519 aa2.32□□□□□ -2.04
ATM-208ENST00000525537 LSM2Q9Y333 95 aaKnown RBP2.32□□□□□ -2.04
ATM-208ENST00000525537 MYH13Q9UKX3 1938 aa2.32□□□□□ -2.04
ATM-208ENST00000525537 SORL1Q92673 2214 aa2.32□□□□□ -2.04
ATM-208ENST00000525537 TRBV6-7A0A0A0MS04 114 aa2.31□□□□□ -2.04
ATM-208ENST00000525537 BBIP1A8MTZ0 92 aa2.31□□□□□ -2.04
ATM-208ENST00000525537 GDF5OSQ5U4N7 250 aa2.31□□□□□ -2.04
ATM-208ENST00000525537 TCTEX1D1Q8N7M0 179 aa2.31□□□□□ -2.04
ATM-208ENST00000525537 ANK1P16157 1881 aa2.31□□□□□ -2.04
ATM-208ENST00000525537 MYH6P13533 1939 aa2.3□□□□□ -2.04
ATM-208ENST00000525537 TRBV20-1A0A075B6N2 111 aa2.3□□□□□ -2.04
ATM-208ENST00000525537 IGLV3-32A0A0A0MS00 114 aa2.3□□□□□ -2.04
ATM-208ENST00000525537 IL9P15248 144 aa2.3□□□□□ -2.04
ATM-208ENST00000525537 LINC00299Q6ZSB3 139 aa2.3□□□□□ -2.04
ATM-208ENST00000525537 C1orf54Q8WWF1 131 aa2.3□□□□□ -2.04
ATM-208ENST00000525537 LINC00526Q96FQ7 95 aa2.3□□□□□ -2.04
ATM-208ENST00000525537 ERCC6Q03468 1493 aa2.3□□□□□ -2.04
ATM-208ENST00000525537 TRPM7Q96QT4 1865 aa2.3□□□□□ -2.04
ATM-208ENST00000525537 CASP8AP2Q9UKL3 1982 aa2.3□□□□□ -2.04
ATM-208ENST00000525537 ERBINQ96RT1 1412 aa2.29□□□□□ -2.04
ATM-208ENST00000525537 ZNF670-ZNF695F2Z2N8 137 aa2.29□□□□□ -2.04
ATM-208ENST00000525537 JMJD7-PLA2G4BH0Y9G9 81 aa2.29□□□□□ -2.04
ATM-208ENST00000525537 TPST1O60507 370 aa2.29□□□□□ -2.04
ATM-208ENST00000525537 PPYP01298 95 aa2.29□□□□□ -2.04
ATM-208ENST00000525537 SELENOWP63302 87 aa2.29□□□□□ -2.04
ATM-208ENST00000525537 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
ATM-208ENST00000525537 UHRF1BP1LA0JNW5 1464 aa2.28□□□□□ -2.04
ATM-208ENST00000525537 A0A0J9YY99 117 aa2.28□□□□□ -2.04
ATM-208ENST00000525537 A0A1W2PPB8 328 aa2.28□□□□□ -2.04
ATM-208ENST00000525537 A0A1W2PRS3 328 aa2.28□□□□□ -2.04
ATM-208ENST00000525537 KIR3DP1A8MWS1 328 aa2.28□□□□□ -2.04
ATM-208ENST00000525537 M0R2P5 195 aa2.28□□□□□ -2.04
ATM-208ENST00000525537 RPL13AP3Q6NVV1 102 aa2.28□□□□□ -2.04
ATM-208ENST00000525537 OBSCN-AS1Q96MR7 158 aa2.28□□□□□ -2.04
ATM-208ENST00000525537 SAR1AQ9NR31 198 aa2.28□□□□□ -2.04
ATM-208ENST00000525537 FBN1P35555 2871 aaKnown RBP2.28□□□□□ -2.04
ATM-208ENST00000525537 PTPRDP23468 1912 aa2.28□□□□□ -2.04
ATM-208ENST00000525537 EML5Q05BV3 1969 aa2.27□□□□□ -2.05
ATM-208ENST00000525537 IGKV2-29A2NJV5 120 aaPredicted RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms