RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 MAP2P11137 1827 aaKnown RBP3.12□□□□□ -1.91
USP47-204ENST00000525078 TMEM2Q9UHN6 1383 aa3.12□□□□□ -1.91
USP47-204ENST00000525078 KDM6AO15550 1401 aaPredicted RBP3.11□□□□□ -1.91
USP47-204ENST00000525078 PTPRMP28827 1452 aa3.11□□□□□ -1.91
USP47-204ENST00000525078 PHLPP1O60346 1717 aa3.11□□□□□ -1.91
USP47-204ENST00000525078 PARP4Q9UKK3 1724 aaKnown RBP3.11□□□□□ -1.91
USP47-204ENST00000525078 hDV103S1A0JD37 113 aa3.11□□□□□ -1.91
USP47-204ENST00000525078 CORTO00230 105 aa3.11□□□□□ -1.91
USP47-204ENST00000525078 RTL8CO15255 209 aa3.11□□□□□ -1.91
USP47-204ENST00000525078 RBP4P02753 201 aa3.11□□□□□ -1.91
USP47-204ENST00000525078 AKAIN1P0CW23 69 aa3.11□□□□□ -1.91
USP47-204ENST00000525078 SLC25A4P12235 298 aa3.11□□□□□ -1.91
USP47-204ENST00000525078 RBP2P50120 134 aa3.11□□□□□ -1.91
USP47-204ENST00000525078 SS18Q15532 418 aa3.11□□□□□ -1.91
USP47-204ENST00000525078 ZNF826PQ6ZT77 177 aa3.11□□□□□ -1.91
USP47-204ENST00000525078 HYLS1Q96M11 299 aa3.11□□□□□ -1.91
USP47-204ENST00000525078 TMEM131LA2VDJ0 1609 aa3.11□□□□□ -1.91
USP47-204ENST00000525078 MALRD1Q5VYJ5 2156 aa3.11□□□□□ -1.91
USP47-204ENST00000525078 MLH3Q9UHC1 1453 aa3.1□□□□□ -1.91
USP47-204ENST00000525078 SNAPC5O75971 98 aa3.1□□□□□ -1.91
USP47-204ENST00000525078 CRPP02741 224 aa3.1□□□□□ -1.91
USP47-204ENST00000525078 BAALC-AS2P0C853 105 aa3.1□□□□□ -1.91
USP47-204ENST00000525078 FGF7P21781 194 aa3.1□□□□□ -1.91
USP47-204ENST00000525078 CIRBPQ14011 172 aaKnown RBP3.1□□□□□ -1.91
USP47-204ENST00000525078 MEIG1Q5JSS6 88 aa3.1□□□□□ -1.91
USP47-204ENST00000525078 ATOH7Q8N100 152 aa3.1□□□□□ -1.91
USP47-204ENST00000525078 LINC00311Q8N616 119 aa3.1□□□□□ -1.91
USP47-204ENST00000525078 OR5AK2Q8NH90 309 aa3.1□□□□□ -1.91
USP47-204ENST00000525078 CIB3Q96Q77 187 aaPredicted RBP3.1□□□□□ -1.91
USP47-204ENST00000525078 SCN3BQ9NY72 215 aa3.1□□□□□ -1.91
USP47-204ENST00000525078 DNAJC15Q9Y5T4 150 aa3.1□□□□□ -1.91
USP47-204ENST00000525078 TOPAZ1Q8N9V7 1692 aa3.1□□□□□ -1.91
USP47-204ENST00000525078 EDC4Q6P2E9 1401 aaKnown RBP3.1□□□□□ -1.91
USP47-204ENST00000525078 MRC1P22897 1456 aa3.09□□□□□ -1.91
USP47-204ENST00000525078 POLEQ07864 2286 aa3.09□□□□□ -1.91
USP47-204ENST00000525078 IGKV2D-26A0A0A0MRZ7 120 aa3.09□□□□□ -1.91
USP47-204ENST00000525078 MUC21A0A0G2JKD1 596 aa3.09□□□□□ -1.91
USP47-204ENST00000525078 MUC21A0A140T8X8 626 aa3.09□□□□□ -1.91
USP47-204ENST00000525078 ZNF737O75373 536 aa3.09□□□□□ -1.91
USP47-204ENST00000525078 UBL3O95164 117 aa3.09□□□□□ -1.91
USP47-204ENST00000525078 TRACP01848 142 aa3.09□□□□□ -1.91
USP47-204ENST00000525078 PYYP10082 97 aa3.09□□□□□ -1.91
USP47-204ENST00000525078 CKS2P33552 79 aa3.09□□□□□ -1.91
USP47-204ENST00000525078 LINC00315P59091 139 aa3.09□□□□□ -1.91
USP47-204ENST00000525078 RPL26P61254 145 aaKnown RBP3.09□□□□□ -1.91
USP47-204ENST00000525078 CDK6Q00534 326 aa3.09□□□□□ -1.91
USP47-204ENST00000525078 CCSMST1Q4G0I0 132 aa3.09□□□□□ -1.91
USP47-204ENST00000525078 C10orf111Q8N326 155 aa3.09□□□□□ -1.91
USP47-204ENST00000525078 Q8N814 137 aa3.09□□□□□ -1.91
USP47-204ENST00000525078 CCL4L1Q8NHW4 92 aa3.09□□□□□ -1.91
USP47-204ENST00000525078 PPP3R2Q96LZ3 170 aa3.09□□□□□ -1.91
USP47-204ENST00000525078 SDF2Q99470 211 aa3.09□□□□□ -1.91
USP47-204ENST00000525078 Q9BRP9 147 aa3.09□□□□□ -1.91
USP47-204ENST00000525078 CYTL1Q9NRR1 136 aa3.09□□□□□ -1.91
USP47-204ENST00000525078 METTL1Q9UBP6 276 aaKnown RBP3.09□□□□□ -1.91
USP47-204ENST00000525078 RPL26L1Q9UNX3 145 aaKnown RBP3.09□□□□□ -1.91
USP47-204ENST00000525078 MYH7P12883 1935 aa3.09□□□□□ -1.92
USP47-204ENST00000525078 A2ML1A8K2U0 1454 aa3.09□□□□□ -1.92
USP47-204ENST00000525078 COL1A1P02452 1464 aaPredicted RBP3.09□□□□□ -1.92
USP47-204ENST00000525078 SLIT1O75093 1534 aa3.09□□□□□ -1.92
USP47-204ENST00000525078 CACNA1DQ01668 2161 aa3.08□□□□□ -1.92
USP47-204ENST00000525078 LOC100130705A0A1B0GUX0 176 aa3.08□□□□□ -1.92
USP47-204ENST00000525078 ZNF93P35789 620 aaPredicted RBP3.08□□□□□ -1.92
USP47-204ENST00000525078 ETV6P41212 452 aa3.08□□□□□ -1.92
USP47-204ENST00000525078 ROMO1P60602 79 aa3.08□□□□□ -1.92
USP47-204ENST00000525078 ZNF846Q147U1 533 aa3.08□□□□□ -1.92
USP47-204ENST00000525078 SCIMPQ6UWF3 145 aa3.08□□□□□ -1.92
USP47-204ENST00000525078 KCNRGQ8N5I3 272 aa3.08□□□□□ -1.92
USP47-204ENST00000525078 RAB37Q96AX2 223 aa3.08□□□□□ -1.92
USP47-204ENST00000525078 C20orf166-AS1Q96NR2 134 aa3.08□□□□□ -1.92
USP47-204ENST00000525078 CST11Q9H112 138 aa3.08□□□□□ -1.92
USP47-204ENST00000525078 SLC35B3Q9H1N7 401 aa3.08□□□□□ -1.92
USP47-204ENST00000525078 COA4Q9NYJ1 87 aa3.08□□□□□ -1.92
USP47-204ENST00000525078 CPS1P31327 1500 aa3.08□□□□□ -1.92
USP47-204ENST00000525078 CHD1O14646 1710 aa3.07□□□□□ -1.92
USP47-204ENST00000525078 KDM3BQ7LBC6 1761 aa3.07□□□□□ -1.92
USP47-204ENST00000525078 SBF1O95248 1867 aa3.07□□□□□ -1.92
USP47-204ENST00000525078 CPAMD8Q8IZJ3 1885 aa3.07□□□□□ -1.92
USP47-204ENST00000525078 TRBV20-1A0A075B6N2 111 aa3.07□□□□□ -1.92
USP47-204ENST00000525078 PNMA8CA0A1B0GUJ8 204 aa3.07□□□□□ -1.92
USP47-204ENST00000525078 LRCOL1A6NCL2 159 aa3.07□□□□□ -1.92
USP47-204ENST00000525078 YPEL1O60688 119 aa3.07□□□□□ -1.92
USP47-204ENST00000525078 IGLV1-51P01701 117 aa3.07□□□□□ -1.92
USP47-204ENST00000525078 IGLV6-57P01721 117 aa3.07□□□□□ -1.92
USP47-204ENST00000525078 CD3DP04234 171 aa3.07□□□□□ -1.92
USP47-204ENST00000525078 S100A8P05109 93 aa3.07□□□□□ -1.92
USP47-204ENST00000525078 CD14P08571 375 aa3.07□□□□□ -1.92
USP47-204ENST00000525078 SSR2P43308 183 aa3.07□□□□□ -1.92
USP47-204ENST00000525078 C1orf134Q5TEV5 83 aa3.07□□□□□ -1.92
USP47-204ENST00000525078 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
USP47-204ENST00000525078 IGFL3Q6UXB1 125 aa3.07□□□□□ -1.92
USP47-204ENST00000525078 OR5AS1Q8N127 324 aa3.07□□□□□ -1.92
USP47-204ENST00000525078 TMEM254Q8TBM7 123 aa3.07□□□□□ -1.92
USP47-204ENST00000525078 PP6455Q8WZ26 134 aa3.07□□□□□ -1.92
USP47-204ENST00000525078 MUCL1Q96DR8 90 aa3.07□□□□□ -1.92
USP47-204ENST00000525078 NABP2Q9BQ15 211 aa3.07□□□□□ -1.92
USP47-204ENST00000525078 RERGLQ9H628 205 aa3.07□□□□□ -1.92
USP47-204ENST00000525078 SAR1AQ9NR31 198 aa3.07□□□□□ -1.92
USP47-204ENST00000525078 LSM2Q9Y333 95 aaKnown RBP3.07□□□□□ -1.92
USP47-204ENST00000525078 ANKARQ7Z5J8 1434 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms