RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 ANKRD29Q8N6D5 301 aa6.55□□□□□ -1.36
CSMD1-213ENST00000523488 C1orf162Q8NEQ5 155 aaPredicted RBP6.55□□□□□ -1.36
CSMD1-213ENST00000523488 DEFB124Q8NES8 71 aa6.55□□□□□ -1.36
CSMD1-213ENST00000523488 RASL11BQ9BPW5 248 aa6.55□□□□□ -1.36
CSMD1-213ENST00000523488 ONECUT1Q9UBC0 465 aa6.55□□□□□ -1.36
CSMD1-213ENST00000523488 WDFY4Q6ZS81 3184 aa6.55□□□□□ -1.36
CSMD1-213ENST00000523488 ENSAO43768 121 aaKnown RBP6.55□□□□□ -1.36
CSMD1-213ENST00000523488 LYZL6O75951 148 aa6.55□□□□□ -1.36
CSMD1-213ENST00000523488 OR11H6Q8NGC7 330 aa6.55□□□□□ -1.36
CSMD1-213ENST00000523488 PINLYPA6NC86 204 aa6.54□□□□□ -1.36
CSMD1-213ENST00000523488 SIGLEC15Q6ZMC9 328 aa6.54□□□□□ -1.36
CSMD1-213ENST00000523488 C3orf56Q8N813 242 aa6.54□□□□□ -1.36
CSMD1-213ENST00000523488 VKORC1Q9BQB6 163 aa6.54□□□□□ -1.36
CSMD1-213ENST00000523488 SCNM1Q9BWG6 230 aa6.54□□□□□ -1.36
CSMD1-213ENST00000523488 SPRY4Q9C004 299 aa6.54□□□□□ -1.36
CSMD1-213ENST00000523488 ZNF815PA8K554 130 aa6.54□□□□□ -1.36
CSMD1-213ENST00000523488 PDE6HQ13956 83 aa6.54□□□□□ -1.36
CSMD1-213ENST00000523488 HES7Q9BYE0 225 aa6.54□□□□□ -1.36
CSMD1-213ENST00000523488 MRPL36Q9P0J6 103 aaKnown RBP6.54□□□□□ -1.36
CSMD1-213ENST00000523488 TRAV4A0A0B4J268 109 aa6.54□□□□□ -1.36
CSMD1-213ENST00000523488 FAM240AA0A1B0GVK7 77 aa6.54□□□□□ -1.36
CSMD1-213ENST00000523488 C9JAW5 83 aa6.54□□□□□ -1.36
CSMD1-213ENST00000523488 TNFRSF6BO95407 300 aa6.54□□□□□ -1.36
CSMD1-213ENST00000523488 RASL10AQ92737 203 aa6.54□□□□□ -1.36
CSMD1-213ENST00000523488 KLK15Q9H2R5 256 aa6.54□□□□□ -1.36
CSMD1-213ENST00000523488 PROCRQ9UNN8 238 aa6.54□□□□□ -1.36
CSMD1-213ENST00000523488 SPTBN4Q9H254 2564 aa6.54□□□□□ -1.36
CSMD1-213ENST00000523488 TRBV7-7A0A0K0K1E9 115 aa6.53□□□□□ -1.36
CSMD1-213ENST00000523488 NTN3O00634 580 aaPredicted RBP6.53□□□□□ -1.36
CSMD1-213ENST00000523488 PLNP26678 52 aa6.53□□□□□ -1.36
CSMD1-213ENST00000523488 WT1-ASQ06250 92 aa6.53□□□□□ -1.36
CSMD1-213ENST00000523488 Q1RN00 199 aa6.53□□□□□ -1.36
CSMD1-213ENST00000523488 UTF1Q5T230 341 aa6.53□□□□□ -1.36
CSMD1-213ENST00000523488 TMEM78Q5T7P6 136 aa6.53□□□□□ -1.36
CSMD1-213ENST00000523488 TRAV8-4A0A0B4J246 113 aa6.53□□□□□ -1.36
CSMD1-213ENST00000523488 H7C2G1 150 aa6.53□□□□□ -1.36
CSMD1-213ENST00000523488 VMA21Q3ZAQ7 101 aa6.53□□□□□ -1.36
CSMD1-213ENST00000523488 PMS2CLQ68D20 193 aa6.53□□□□□ -1.36
CSMD1-213ENST00000523488 Q71RC1 249 aaPredicted RBP6.53□□□□□ -1.36
CSMD1-213ENST00000523488 C8orf49Q96NF6 230 aa6.53□□□□□ -1.36
CSMD1-213ENST00000523488 SLC25A20O43772 301 aa6.53□□□□□ -1.36
CSMD1-213ENST00000523488 SH2D1AO60880 128 aa6.53□□□□□ -1.36
CSMD1-213ENST00000523488 C15orf53Q8NAA6 179 aa6.53□□□□□ -1.36
CSMD1-213ENST00000523488 OR10J6PQ8NGY7 276 aa6.53□□□□□ -1.36
CSMD1-213ENST00000523488 CITED2Q99967 270 aaPredicted RBP6.53□□□□□ -1.36
CSMD1-213ENST00000523488 UBTD1Q9HAC8 227 aa6.53□□□□□ -1.36
CSMD1-213ENST00000523488 H3BRN7 92 aa6.52□□□□□ -1.37
CSMD1-213ENST00000523488 M0R3E3 92 aa6.52□□□□□ -1.37
CSMD1-213ENST00000523488 P0DMU3 169 aa6.52□□□□□ -1.37
CSMD1-213ENST00000523488 FAM231AP0DMU4 169 aa6.52□□□□□ -1.37
CSMD1-213ENST00000523488 FAM231CP0DMU5 169 aa6.52□□□□□ -1.37
CSMD1-213ENST00000523488 EMP1P54849 157 aa6.52□□□□□ -1.37
CSMD1-213ENST00000523488 TMEM155Q4W5P6 130 aa6.52□□□□□ -1.37
CSMD1-213ENST00000523488 RUSC1-AS1Q66K80 236 aa6.52□□□□□ -1.37
CSMD1-213ENST00000523488 MRPL20Q9BYC9 149 aaKnown RBP6.52□□□□□ -1.37
CSMD1-213ENST00000523488 CHD8Q9HCK8 2581 aa6.52□□□□□ -1.37
CSMD1-213ENST00000523488 TCL1BO95988 128 aa6.52□□□□□ -1.37
CSMD1-213ENST00000523488 DEFB109BQ30KR1 87 aa6.52□□□□□ -1.37
CSMD1-213ENST00000523488 Q8N8P6 123 aa6.52□□□□□ -1.37
CSMD1-213ENST00000523488 NRACQ8N912 160 aa6.52□□□□□ -1.37
CSMD1-213ENST00000523488 AMELXQ99217 191 aa6.52□□□□□ -1.37
CSMD1-213ENST00000523488 TRBV19A0A075B6N1 114 aa6.52□□□□□ -1.37
CSMD1-213ENST00000523488 RNF223E7ERA6 249 aa6.52□□□□□ -1.37
CSMD1-213ENST00000523488 ACACBO00763 2458 aa6.52□□□□□ -1.37
CSMD1-213ENST00000523488 TEX36Q5VZQ5 186 aa6.52□□□□□ -1.37
CSMD1-213ENST00000523488 SAP25Q8TEE9 199 aa6.52□□□□□ -1.37
CSMD1-213ENST00000523488 NGBQ9NPG2 151 aa6.52□□□□□ -1.37
CSMD1-213ENST00000523488 ZNRD1Q9P1U0 126 aa6.52□□□□□ -1.37
CSMD1-213ENST00000523488 MED13Q9UHV7 2174 aa6.52□□□□□ -1.37
CSMD1-213ENST00000523488 E7EUB6 86 aa6.51□□□□□ -1.37
CSMD1-213ENST00000523488 H7C1H1 209 aa6.51□□□□□ -1.37
CSMD1-213ENST00000523488 RPL7P18124 248 aaKnown RBP6.51□□□□□ -1.37
CSMD1-213ENST00000523488 ATP5J2P56134 94 aa6.51□□□□□ -1.37
CSMD1-213ENST00000523488 HES1Q14469 280 aa6.51□□□□□ -1.37
CSMD1-213ENST00000523488 RAB1BQ9H0U4 201 aa6.51□□□□□ -1.37
CSMD1-213ENST00000523488 SPANXCQ9NY87 97 aa6.51□□□□□ -1.37
CSMD1-213ENST00000523488 TLN1Q9Y490 2541 aaKnown RBP6.51□□□□□ -1.37
CSMD1-213ENST00000523488 TECTAO75443 2155 aa6.51□□□□□ -1.37
CSMD1-213ENST00000523488 K7ESF4 209 aa6.51□□□□□ -1.37
CSMD1-213ENST00000523488 LAGE3Q14657 143 aa6.51□□□□□ -1.37
CSMD1-213ENST00000523488 FAM201AQ5SY85 155 aa6.51□□□□□ -1.37
CSMD1-213ENST00000523488 LINC01587Q99440 93 aa6.51□□□□□ -1.37
CSMD1-213ENST00000523488 TMEM126AQ9H061 195 aa6.51□□□□□ -1.37
CSMD1-213ENST00000523488 PPDPFQ9H3Y8 114 aa6.51□□□□□ -1.37
CSMD1-213ENST00000523488 RPUSD1Q9UJJ7 312 aaKnown RBP6.51□□□□□ -1.37
CSMD1-213ENST00000523488 VPREB3Q9UKI3 123 aa6.51□□□□□ -1.37
CSMD1-213ENST00000523488 TRAV2A0A0B4J234 112 aa6.51□□□□□ -1.37
CSMD1-213ENST00000523488 GATA1P15976 413 aaPredicted RBP6.51□□□□□ -1.37
CSMD1-213ENST00000523488 NTN5Q8WTR8 489 aaPredicted RBP6.51□□□□□ -1.37
CSMD1-213ENST00000523488 BAALCQ8WXS3 180 aa6.51□□□□□ -1.37
CSMD1-213ENST00000523488 OTOGLQ3ZCN5 2332 aa6.51□□□□□ -1.37
CSMD1-213ENST00000523488 LINC01548A6NM66 108 aa6.5□□□□□ -1.37
CSMD1-213ENST00000523488 M0R2P5 195 aa6.5□□□□□ -1.37
CSMD1-213ENST00000523488 C17orf77Q96MU5 243 aa6.5□□□□□ -1.37
CSMD1-213ENST00000523488 SCGB3A1Q96QR1 104 aa6.5□□□□□ -1.37
CSMD1-213ENST00000523488 COL6A3P12111 3177 aa6.5□□□□□ -1.37
CSMD1-213ENST00000523488 SPRY3O43610 288 aa6.5□□□□□ -1.37
CSMD1-213ENST00000523488 EFNA4P52798 201 aa6.5□□□□□ -1.37
CSMD1-213ENST00000523488 MSRB1Q9NZV6 116 aa6.5□□□□□ -1.37
CSMD1-213ENST00000523488 F8VRH5 84 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 1351.2 ms