RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 ZNF492Q9P255 531 aa17.48■□□□□ 0.39
PVT1-219ENST00000523427 NMBP08949 121 aa17.47■□□□□ 0.39
PVT1-219ENST00000523427 S100A10P60903 97 aa17.47■□□□□ 0.39
PVT1-219ENST00000523427 PDE6HQ13956 83 aa17.47■□□□□ 0.39
PVT1-219ENST00000523427 VWC2Q2TAL6 325 aa17.46■□□□□ 0.39
PVT1-219ENST00000523427 IGSF23A1L1A6 192 aa17.45■□□□□ 0.38
PVT1-219ENST00000523427 PVALBP20472 110 aaPredicted RBP17.45■□□□□ 0.38
PVT1-219ENST00000523427 S100A11P31949 105 aa17.45■□□□□ 0.38
PVT1-219ENST00000523427 ZNF138P52744 262 aa17.45■□□□□ 0.38
PVT1-219ENST00000523427 SLC25A2Q9BXI2 301 aa17.45■□□□□ 0.38
PVT1-219ENST00000523427 C11orf1Q9H5F2 150 aa17.45■□□□□ 0.38
PVT1-219ENST00000523427 SULT1A1P50225 295 aa17.44■□□□□ 0.38
PVT1-219ENST00000523427 MIR17HGQ75NE6 70 aa17.44■□□□□ 0.38
PVT1-219ENST00000523427 SLC25A31Q9H0C2 315 aa17.44■□□□□ 0.38
PVT1-219ENST00000523427 K7EP13 123 aa17.43■□□□□ 0.38
PVT1-219ENST00000523427 NBEAP1P0C6P0 100 aa17.43■□□□□ 0.38
PVT1-219ENST00000523427 TMEM183BQ1AE95 376 aa17.43■□□□□ 0.38
PVT1-219ENST00000523427 TMEM183AQ8IXX5 376 aa17.43■□□□□ 0.38
PVT1-219ENST00000523427 TMEM252Q8N6L7 170 aa17.43■□□□□ 0.38
PVT1-219ENST00000523427 TXNDC17Q9BRA2 123 aa17.43■□□□□ 0.38
PVT1-219ENST00000523427 LOC100131303A0A0U1RQF7 123 aa17.42■□□□□ 0.38
PVT1-219ENST00000523427 ORM1P02763 201 aa17.42■□□□□ 0.38
PVT1-219ENST00000523427 OR10J4P0C629 311 aa17.42■□□□□ 0.38
PVT1-219ENST00000523427 HBG1P69891 147 aa17.42■□□□□ 0.38
PVT1-219ENST00000523427 HBG2P69892 147 aa17.42■□□□□ 0.38
PVT1-219ENST00000523427 STX12Q86Y82 276 aa17.42■□□□□ 0.38
PVT1-219ENST00000523427 C10orf126Q8N4M7 172 aa17.42■□□□□ 0.38
PVT1-219ENST00000523427 SDHCQ99643 169 aaPredicted RBP17.42■□□□□ 0.38
PVT1-219ENST00000523427 SEC22CQ9BRL7 303 aa17.42■□□□□ 0.38
PVT1-219ENST00000523427 IQCF2Q8IXL9 164 aa17.41■□□□□ 0.38
PVT1-219ENST00000523427 OR10G4Q8NGN3 311 aa17.41■□□□□ 0.38
PVT1-219ENST00000523427 C2orf50Q96LR7 162 aa17.41■□□□□ 0.38
PVT1-219ENST00000523427 TMEM70Q9BUB7 260 aa17.41■□□□□ 0.38
PVT1-219ENST00000523427 OR51M1Q9H341 326 aa17.41■□□□□ 0.38
PVT1-219ENST00000523427 Q9HAA7 133 aa17.41■□□□□ 0.38
PVT1-219ENST00000523427 LYRM2Q9NU23 88 aaPredicted RBP17.41■□□□□ 0.38
PVT1-219ENST00000523427 TRAV6A0A075B6T7 132 aa17.4■□□□□ 0.38
PVT1-219ENST00000523427 C9JCJ5 164 aa17.4■□□□□ 0.38
PVT1-219ENST00000523427 NHLRC2Q8NBF2 726 aa17.4■□□□□ 0.38
PVT1-219ENST00000523427 FAM167A-AS1Q96KT0 104 aa17.4■□□□□ 0.38
PVT1-219ENST00000523427 NAGKQ9UJ70 344 aa17.4■□□□□ 0.38
PVT1-219ENST00000523427 LRCOL1A6NCL2 159 aa17.39■□□□□ 0.37
PVT1-219ENST00000523427 THAP6Q8TBB0 222 aa17.39■□□□□ 0.37
PVT1-219ENST00000523427 CHAC2Q8WUX2 184 aa17.39■□□□□ 0.37
PVT1-219ENST00000523427 PHYHIPLQ96FC7 376 aa17.39■□□□□ 0.37
PVT1-219ENST00000523427 NPCDR1Q9BY65 106 aa17.39■□□□□ 0.37
PVT1-219ENST00000523427 FAM30AQ9NZY2 134 aa17.39■□□□□ 0.37
PVT1-219ENST00000523427 IL7P13232 177 aa17.38■□□□□ 0.37
PVT1-219ENST00000523427 PPT1P50897 306 aa17.38■□□□□ 0.37
PVT1-219ENST00000523427 RAB32Q13637 225 aa17.38■□□□□ 0.37
PVT1-219ENST00000523427 FAM159AQ6UWV7 190 aa17.38■□□□□ 0.37
PVT1-219ENST00000523427 OR4C5Q8NGB2 326 aa17.38■□□□□ 0.37
PVT1-219ENST00000523427 RASL10AQ92737 203 aa17.38■□□□□ 0.37
PVT1-219ENST00000523427 PAXXQ9BUH6 204 aa17.38■□□□□ 0.37
PVT1-219ENST00000523427 IGHV3-16A0A0C4DH30 117 aa17.37■□□□□ 0.37
PVT1-219ENST00000523427 IGHV3-38A0A0C4DH36 116 aa17.37■□□□□ 0.37
PVT1-219ENST00000523427 CSN1S1P47710 185 aa17.37■□□□□ 0.37
PVT1-219ENST00000523427 RANP62826 216 aaKnown RBP17.37■□□□□ 0.37
PVT1-219ENST00000523427 ZNF266Q14584 549 aa17.37■□□□□ 0.37
PVT1-219ENST00000523427 ATP6V1FQ16864 119 aa17.37■□□□□ 0.37
PVT1-219ENST00000523427 CNPY1Q3B7I2 92 aa17.37■□□□□ 0.37
PVT1-219ENST00000523427 NTN5Q8WTR8 489 aaPredicted RBP17.37■□□□□ 0.37
PVT1-219ENST00000523427 SPXQ9BT56 116 aa17.37■□□□□ 0.37
PVT1-219ENST00000523427 TRGV11A0A075B6L2 103 aa17.36■□□□□ 0.37
PVT1-219ENST00000523427 Q8N814 137 aa17.36■□□□□ 0.37
PVT1-219ENST00000523427 FXYD5Q96DB9 178 aa17.36■□□□□ 0.37
PVT1-219ENST00000523427 TRAV4A0A0B4J268 109 aa17.34■□□□□ 0.37
PVT1-219ENST00000523427 TRBV7-9A0A0J9YWB2 115 aa17.33■□□□□ 0.36
PVT1-219ENST00000523427 PLA2G10O15496 165 aa17.33■□□□□ 0.36
PVT1-219ENST00000523427 GNRH2O43555 120 aa17.33■□□□□ 0.36
PVT1-219ENST00000523427 OR7C2O60412 319 aa17.33■□□□□ 0.36
PVT1-219ENST00000523427 TCRBP04435 133 aa17.33■□□□□ 0.36
PVT1-219ENST00000523427 NHLH2Q02577 135 aa17.33■□□□□ 0.36
PVT1-219ENST00000523427 IGHV3-30P01768 117 aa17.32■□□□□ 0.36
PVT1-219ENST00000523427 IGHV3-33P01772 117 aa17.32■□□□□ 0.36
PVT1-219ENST00000523427 IGHV3-30-3P0DP02 117 aa17.32■□□□□ 0.36
PVT1-219ENST00000523427 IGHV3-30-5P0DP03 117 aa17.32■□□□□ 0.36
PVT1-219ENST00000523427 OR10J3Q5JRS4 329 aa17.32■□□□□ 0.36
PVT1-219ENST00000523427 NUDT15Q9NV35 164 aa17.32■□□□□ 0.36
PVT1-219ENST00000523427 IBA57-AS1B1ANH7 110 aa17.31■□□□□ 0.36
PVT1-219ENST00000523427 LYRM1O43325 122 aa17.31■□□□□ 0.36
PVT1-219ENST00000523427 Q6AWC8 147 aa17.31■□□□□ 0.36
PVT1-219ENST00000523427 OR5C1Q8NGR4 320 aa17.31■□□□□ 0.36
PVT1-219ENST00000523427 HYLS1Q96M11 299 aa17.31■□□□□ 0.36
PVT1-219ENST00000523427 TRAV8-6A0A0B4J262 113 aa17.3■□□□□ 0.36
PVT1-219ENST00000523427 M0R2P5 195 aa17.3■□□□□ 0.36
PVT1-219ENST00000523427 LINC01556Q5JQF7 62 aa17.3■□□□□ 0.36
PVT1-219ENST00000523427 SH2D6Q7Z4S9 175 aa17.3■□□□□ 0.36
PVT1-219ENST00000523427 RPH3ALQ9UNE2 315 aa17.3■□□□□ 0.36
PVT1-219ENST00000523427 RBAKDNA6NC62 111 aa17.29■□□□□ 0.36
PVT1-219ENST00000523427 IL15RAQ13261 267 aa17.29■□□□□ 0.36
PVT1-219ENST00000523427 RBM38Q9H0Z9 239 aaKnown RBP17.29■□□□□ 0.36
PVT1-219ENST00000523427 PLA2G1BP04054 148 aaKnown RBP17.28■□□□□ 0.36
PVT1-219ENST00000523427 UBE2L3P68036 154 aaKnown RBP17.28■□□□□ 0.36
PVT1-219ENST00000523427 DIRC3C9JPN6 131 aa17.27■□□□□ 0.36
PVT1-219ENST00000523427 EIF3GO75821 320 aaKnown RBP eCLIP17.26■□□□□ 0.35
PVT1-219ENST00000523427 GATA1P15976 413 aaPredicted RBP17.26■□□□□ 0.35
PVT1-219ENST00000523427 TIRAPP58753 221 aa17.26■□□□□ 0.35
PVT1-219ENST00000523427 LINC00528Q8N1L1 170 aa17.26■□□□□ 0.35
PVT1-219ENST00000523427 IGHV3-73A0A0B4J1V6 119 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms