RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 A0A096LPF7 62 aa14.32□□□□□ -0.12
SDCBP-209ENST00000522243 TAS2R45P59539 299 aa14.32□□□□□ -0.12
SDCBP-209ENST00000522243 LYPD1Q8N2G4 141 aa14.32□□□□□ -0.12
SDCBP-209ENST00000522243 HYLS1Q96M11 299 aa14.32□□□□□ -0.12
SDCBP-209ENST00000522243 C18orf15Q96N68 181 aa14.32□□□□□ -0.12
SDCBP-209ENST00000522243 RBAKDNA6NC62 111 aa14.31□□□□□ -0.12
SDCBP-209ENST00000522243 DIRC3C9JPN6 131 aa14.31□□□□□ -0.12
SDCBP-209ENST00000522243 KRTAP1-5Q9BYS1 174 aa14.31□□□□□ -0.12
SDCBP-209ENST00000522243 RPH3ALQ9UNE2 315 aa14.31□□□□□ -0.12
SDCBP-209ENST00000522243 ALG5Q9Y673 324 aa14.31□□□□□ -0.12
SDCBP-209ENST00000522243 PGPA6NDG6 321 aa14.3□□□□□ -0.12
SDCBP-209ENST00000522243 ZNF266Q14584 549 aa14.3□□□□□ -0.12
SDCBP-209ENST00000522243 MRPS16Q9Y3D3 137 aaKnown RBP14.3□□□□□ -0.12
SDCBP-209ENST00000522243 PKD1P98161 4303 aa14.3□□□□□ -0.12
SDCBP-209ENST00000522243 TRBV7-9A0A0J9YWB2 115 aa14.29□□□□□ -0.12
SDCBP-209ENST00000522243 RAB2AP61019 212 aa14.29□□□□□ -0.12
SDCBP-209ENST00000522243 ZNF415Q09FC8 603 aa14.29□□□□□ -0.12
SDCBP-209ENST00000522243 ACOT6Q3I5F7 207 aaPredicted RBP14.29□□□□□ -0.12
SDCBP-209ENST00000522243 ST6GAL2Q96JF0 529 aa14.29□□□□□ -0.12
SDCBP-209ENST00000522243 UPK3BQ9BT76 320 aa14.29□□□□□ -0.12
SDCBP-209ENST00000522243 A0A1W2PPV4 95 aa14.28□□□□□ -0.12
SDCBP-209ENST00000522243 HMGB3O15347 200 aaKnown RBP14.28□□□□□ -0.12
SDCBP-209ENST00000522243 OTORQ9NRC9 128 aa14.28□□□□□ -0.12
SDCBP-209ENST00000522243 MDFICQ9P1T7 246 aa14.28□□□□□ -0.12
SDCBP-209ENST00000522243 MUC4Q99102 2169 aa14.27□□□□□ -0.12
SDCBP-209ENST00000522243 PAX4O43316 350 aa14.27□□□□□ -0.13
SDCBP-209ENST00000522243 TTC32Q5I0X7 151 aa14.27□□□□□ -0.13
SDCBP-209ENST00000522243 DYNC1H1Q14204 4646 aaKnown RBP14.27□□□□□ -0.13
SDCBP-209ENST00000522243 TMEM183BQ1AE95 376 aa14.26□□□□□ -0.13
SDCBP-209ENST00000522243 Q6AWC8 147 aa14.26□□□□□ -0.13
SDCBP-209ENST00000522243 TMEM183AQ8IXX5 376 aa14.26□□□□□ -0.13
SDCBP-209ENST00000522243 CMTM2Q8TAZ6 248 aa14.26□□□□□ -0.13
SDCBP-209ENST00000522243 C8orf49Q96NF6 230 aa14.26□□□□□ -0.13
SDCBP-209ENST00000522243 BATF3Q9NR55 127 aa14.26□□□□□ -0.13
SDCBP-209ENST00000522243 C16orf90A8MZG2 172 aa14.25□□□□□ -0.13
SDCBP-209ENST00000522243 FAM74A1Q5RGS3 127 aa14.25□□□□□ -0.13
SDCBP-209ENST00000522243 PQLC2Q6ZP29 291 aa14.25□□□□□ -0.13
SDCBP-209ENST00000522243 OR10G4Q8NGN3 311 aa14.25□□□□□ -0.13
SDCBP-209ENST00000522243 OR10G9Q8NGN4 311 aa14.25□□□□□ -0.13
SDCBP-209ENST00000522243 OR10G7Q8NGN6 311 aa14.25□□□□□ -0.13
SDCBP-209ENST00000522243 NAGKQ9UJ70 344 aa14.25□□□□□ -0.13
SDCBP-209ENST00000522243 LENEPQ9Y5L5 61 aa14.25□□□□□ -0.13
SDCBP-209ENST00000522243 ICOSQ9Y6W8 199 aa14.25□□□□□ -0.13
SDCBP-209ENST00000522243 DNAH11Q96DT5 4516 aa14.25□□□□□ -0.13
SDCBP-209ENST00000522243 PKHD1P08F94 4074 aa14.25□□□□□ -0.13
SDCBP-209ENST00000522243 GNG5P63218 68 aa14.24□□□□□ -0.13
SDCBP-209ENST00000522243 FHL2Q14192 279 aa14.24□□□□□ -0.13
SDCBP-209ENST00000522243 FAM159AQ6UWV7 190 aa14.24□□□□□ -0.13
SDCBP-209ENST00000522243 GOLT1AQ6ZVE7 132 aa14.24□□□□□ -0.13
SDCBP-209ENST00000522243 HSD17B11Q8NBQ5 300 aa14.24□□□□□ -0.13
SDCBP-209ENST00000522243 PRO0255Q9UI72 69 aa14.24□□□□□ -0.13
SDCBP-209ENST00000522243 HHLA3Q9XRX5 114 aa14.24□□□□□ -0.13
SDCBP-209ENST00000522243 TRAV8-1A0A0A6YYK1 113 aa14.23□□□□□ -0.13
SDCBP-209ENST00000522243 SFTA3P0C7M3 94 aa14.23□□□□□ -0.13
SDCBP-209ENST00000522243 CRYBA4P53673 196 aa14.23□□□□□ -0.13
SDCBP-209ENST00000522243 TRGV11A0A075B6L2 103 aa14.22□□□□□ -0.13
SDCBP-209ENST00000522243 F6UZH7 168 aa14.22□□□□□ -0.13
SDCBP-209ENST00000522243 TMED6Q8WW62 240 aa14.22□□□□□ -0.13
SDCBP-209ENST00000522243 TVP23CQ96ET8 276 aa14.22□□□□□ -0.13
SDCBP-209ENST00000522243 SGK494Q96LW2 274 aa14.22□□□□□ -0.13
SDCBP-209ENST00000522243 MED28Q9H204 178 aa14.22□□□□□ -0.13
SDCBP-209ENST00000522243 TRGV4A0A0C4DH28 118 aa14.21□□□□□ -0.13
SDCBP-209ENST00000522243 A0A1W2PPQ1 181 aa14.21□□□□□ -0.13
SDCBP-209ENST00000522243 GNRH2O43555 120 aa14.21□□□□□ -0.13
SDCBP-209ENST00000522243 ARL14EPLP0DKL9 152 aa14.21□□□□□ -0.13
SDCBP-209ENST00000522243 CDC34P49427 236 aaPredicted RBP14.21□□□□□ -0.13
SDCBP-209ENST00000522243 ZNF479Q96JC4 524 aa14.21□□□□□ -0.13
SDCBP-209ENST00000522243 SIVA1O15304 175 aa14.2□□□□□ -0.14
SDCBP-209ENST00000522243 NXPH4O95158 308 aa14.2□□□□□ -0.14
SDCBP-209ENST00000522243 ATP6V0CP27449 155 aa14.2□□□□□ -0.14
SDCBP-209ENST00000522243 SLAQ13239 276 aa14.2□□□□□ -0.14
SDCBP-209ENST00000522243 Q5BKY6 102 aa14.2□□□□□ -0.14
SDCBP-209ENST00000522243 SPXQ9BT56 116 aa14.2□□□□□ -0.14
SDCBP-209ENST00000522243 TREM1Q9NP99 234 aa14.2□□□□□ -0.14
SDCBP-209ENST00000522243 PTTG1O95997 202 aa14.19□□□□□ -0.14
SDCBP-209ENST00000522243 MRPL23Q16540 153 aaKnown RBP14.19□□□□□ -0.14
SDCBP-209ENST00000522243 SPATA12Q7Z6I5 190 aa14.19□□□□□ -0.14
SDCBP-209ENST00000522243 RASL10AQ92737 203 aa14.19□□□□□ -0.14
SDCBP-209ENST00000522243 AQP10Q96PS8 301 aa14.19□□□□□ -0.14
SDCBP-209ENST00000522243 TRAV21A0A0B4J279 112 aa14.18□□□□□ -0.14
SDCBP-209ENST00000522243 STAG3L2P0CL84 134 aa14.18□□□□□ -0.14
SDCBP-209ENST00000522243 STAG3L3P0CL85 134 aa14.18□□□□□ -0.14
SDCBP-209ENST00000522243 LINC00315P59091 139 aa14.18□□□□□ -0.14
SDCBP-209ENST00000522243 LYPD5Q6UWN5 251 aa14.18□□□□□ -0.14
SDCBP-209ENST00000522243 OR2G3Q8NGZ4 309 aa14.18□□□□□ -0.14
SDCBP-209ENST00000522243 RAB24Q969Q5 203 aa14.18□□□□□ -0.14
SDCBP-209ENST00000522243 IGHV3-16A0A0C4DH30 117 aa14.17□□□□□ -0.14
SDCBP-209ENST00000522243 TYMSP04818 313 aa14.17□□□□□ -0.14
SDCBP-209ENST00000522243 GCHFRP30047 84 aa14.17□□□□□ -0.14
SDCBP-209ENST00000522243 TDRG1Q3Y452 100 aa14.17□□□□□ -0.14
SDCBP-209ENST00000522243 ARL6IP6Q8N6S5 226 aa14.17□□□□□ -0.14
SDCBP-209ENST00000522243 PSMG3Q9BT73 122 aaPredicted RBP14.17□□□□□ -0.14
SDCBP-209ENST00000522243 SH3BGRL3Q9H299 93 aa14.17□□□□□ -0.14
SDCBP-209ENST00000522243 NEGR1Q7Z3B1 354 aa14.16□□□□□ -0.14
SDCBP-209ENST00000522243 K7EQD1 137 aa14.15□□□□□ -0.14
SDCBP-209ENST00000522243 M0R2P5 195 aa14.15□□□□□ -0.14
SDCBP-209ENST00000522243 GYPEP15421 78 aa14.15□□□□□ -0.14
SDCBP-209ENST00000522243 IQCF2Q8IXL9 164 aa14.15□□□□□ -0.14
SDCBP-209ENST00000522243 KRTAP4-5Q9BYR2 181 aa14.15□□□□□ -0.14
SDCBP-209ENST00000522243 SDF2L1Q9HCN8 221 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms