RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 SYNGR2O43760 224 aa3.95□□□□□ -1.78
PABPC1-216ENST00000520868 HYPMO75409 117 aa3.95□□□□□ -1.78
PABPC1-216ENST00000520868 MED6O75586 246 aa3.95□□□□□ -1.78
PABPC1-216ENST00000520868 ADAP1O75689 374 aa3.95□□□□□ -1.78
PABPC1-216ENST00000520868 RLN2P04090 185 aa3.95□□□□□ -1.78
PABPC1-216ENST00000520868 RPL7P18124 248 aaKnown RBP3.95□□□□□ -1.78
PABPC1-216ENST00000520868 S100A7P31151 101 aa3.95□□□□□ -1.78
PABPC1-216ENST00000520868 CDKN1BP46527 198 aa3.95□□□□□ -1.78
PABPC1-216ENST00000520868 XGP55808 180 aa3.95□□□□□ -1.78
PABPC1-216ENST00000520868 LINC00315P59091 139 aa3.95□□□□□ -1.78
PABPC1-216ENST00000520868 SRPXP78539 464 aa3.95□□□□□ -1.78
PABPC1-216ENST00000520868 CYP2G1PQ6ZSU1 146 aa3.95□□□□□ -1.78
PABPC1-216ENST00000520868 ACOT7LQ6ZUV0 252 aa3.95□□□□□ -1.78
PABPC1-216ENST00000520868 TMED4Q7Z7H5 227 aa3.95□□□□□ -1.78
PABPC1-216ENST00000520868 LYPD1Q8N2G4 141 aa3.95□□□□□ -1.78
PABPC1-216ENST00000520868 OR10J6PQ8NGY7 276 aa3.95□□□□□ -1.78
PABPC1-216ENST00000520868 RNASE8Q8TDE3 154 aaKnown RBP3.95□□□□□ -1.78
PABPC1-216ENST00000520868 RPUSD4Q96CM3 377 aaKnown RBP3.95□□□□□ -1.78
PABPC1-216ENST00000520868 CIB3Q96Q77 187 aaPredicted RBP3.95□□□□□ -1.78
PABPC1-216ENST00000520868 UPK3BQ9BT76 320 aa3.95□□□□□ -1.78
PABPC1-216ENST00000520868 SHANK2-AS3Q9BTD1 123 aa3.95□□□□□ -1.78
PABPC1-216ENST00000520868 MRPS16Q9Y3D3 137 aaKnown RBP3.95□□□□□ -1.78
PABPC1-216ENST00000520868 FLG2Q5D862 2391 aaPredicted RBP3.94□□□□□ -1.78
PABPC1-216ENST00000520868 A0A096LPF7 62 aa3.94□□□□□ -1.78
PABPC1-216ENST00000520868 H3BTX0 84 aa3.94□□□□□ -1.78
PABPC1-216ENST00000520868 SMR3BP02814 79 aaPredicted RBP3.94□□□□□ -1.78
PABPC1-216ENST00000520868 LINC00869P0C866 280 aa3.94□□□□□ -1.78
PABPC1-216ENST00000520868 RRAS2P62070 204 aaPredicted RBP3.94□□□□□ -1.78
PABPC1-216ENST00000520868 SPCS2Q15005 226 aa3.94□□□□□ -1.78
PABPC1-216ENST00000520868 Q5VSD8 79 aa3.94□□□□□ -1.78
PABPC1-216ENST00000520868 PATE2Q6UY27 113 aa3.94□□□□□ -1.78
PABPC1-216ENST00000520868 Q6ZRN7 208 aaPredicted RBP3.94□□□□□ -1.78
PABPC1-216ENST00000520868 LINC00612Q8N6U2 182 aa3.94□□□□□ -1.78
PABPC1-216ENST00000520868 FRZBQ92765 325 aa3.94□□□□□ -1.78
PABPC1-216ENST00000520868 VSIG2Q96IQ7 327 aa3.94□□□□□ -1.78
PABPC1-216ENST00000520868 ARL6Q9H0F7 186 aa3.94□□□□□ -1.78
PABPC1-216ENST00000520868 STRAPQ9Y3F4 350 aaKnown RBP3.94□□□□□ -1.78
PABPC1-216ENST00000520868 SRRM2Q9UQ35 2752 aaKnown RBP3.94□□□□□ -1.78
PABPC1-216ENST00000520868 TRGV2A0A075B6R0 118 aa3.93□□□□□ -1.78
PABPC1-216ENST00000520868 A0A087X0K7 114 aa3.93□□□□□ -1.78
PABPC1-216ENST00000520868 TRAV12-3A0A0B4J271 114 aa3.93□□□□□ -1.78
PABPC1-216ENST00000520868 DUXBA0A1W2PPF3 345 aa3.93□□□□□ -1.78
PABPC1-216ENST00000520868 H3BNG1 76 aa3.93□□□□□ -1.78
PABPC1-216ENST00000520868 MRPS12O15235 138 aaKnown RBP3.93□□□□□ -1.78
PABPC1-216ENST00000520868 SIVA1O15304 175 aa3.93□□□□□ -1.78
PABPC1-216ENST00000520868 CCNKO75909 580 aa3.93□□□□□ -1.78
PABPC1-216ENST00000520868 IFNA5P01569 189 aa3.93□□□□□ -1.78
PABPC1-216ENST00000520868 SLC25A6P12236 298 aa3.93□□□□□ -1.78
PABPC1-216ENST00000520868 POLR2GP62487 172 aaKnown RBP eCLIP3.93□□□□□ -1.78
PABPC1-216ENST00000520868 HIGD2BQ4VC39 106 aa3.93□□□□□ -1.78
PABPC1-216ENST00000520868 TMEM128Q5BJH2 165 aa3.93□□□□□ -1.78
PABPC1-216ENST00000520868 Q6ZTI0 123 aa3.93□□□□□ -1.78
PABPC1-216ENST00000520868 C20orf144Q9BQM9 153 aa3.93□□□□□ -1.78
PABPC1-216ENST00000520868 ARV1Q9H2C2 271 aa3.93□□□□□ -1.78
PABPC1-216ENST00000520868 PSENENQ9NZ42 101 aa3.93□□□□□ -1.78
PABPC1-216ENST00000520868 RSL24D1Q9UHA3 163 aaKnown RBP3.93□□□□□ -1.78
PABPC1-216ENST00000520868 RABL2BQ9UNT1 228 aa3.93□□□□□ -1.78
PABPC1-216ENST00000520868 PIGBOS1A0A0B4J2F0 54 aa3.92□□□□□ -1.78
PABPC1-216ENST00000520868 LINC00854A0A1B0GVQ3 168 aa3.92□□□□□ -1.78
PABPC1-216ENST00000520868 FABP12A6NFH5 140 aa3.92□□□□□ -1.78
PABPC1-216ENST00000520868 NXPH4O95158 308 aa3.92□□□□□ -1.78
PABPC1-216ENST00000520868 SFT2D2O95562 160 aa3.92□□□□□ -1.78
PABPC1-216ENST00000520868 DNAH10OSP0CZ25 163 aa3.92□□□□□ -1.78
PABPC1-216ENST00000520868 CT45A10P0DMU9 189 aa3.92□□□□□ -1.78
PABPC1-216ENST00000520868 PLP1P60201 277 aa3.92□□□□□ -1.78
PABPC1-216ENST00000520868 KRTAP10-1P60331 282 aa3.92□□□□□ -1.78
PABPC1-216ENST00000520868 SELENOTP62341 195 aa3.92□□□□□ -1.78
PABPC1-216ENST00000520868 HAMPP81172 84 aa3.92□□□□□ -1.78
PABPC1-216ENST00000520868 SLC38A11Q08AI6 406 aa3.92□□□□□ -1.78
PABPC1-216ENST00000520868 PPP1R1AQ13522 171 aa3.92□□□□□ -1.78
PABPC1-216ENST00000520868 LCN15Q6UWW0 184 aa3.92□□□□□ -1.78
PABPC1-216ENST00000520868 LINC00305Q7Z4B0 112 aa3.92□□□□□ -1.78
PABPC1-216ENST00000520868 S100A7AQ86SG5 101 aa3.92□□□□□ -1.78
PABPC1-216ENST00000520868 LRTM2Q8N967 370 aa3.92□□□□□ -1.78
PABPC1-216ENST00000520868 ZNF431Q8TF32 576 aaPredicted RBP3.92□□□□□ -1.78
PABPC1-216ENST00000520868 SLC50A1Q9BRV3 221 aa3.92□□□□□ -1.78
PABPC1-216ENST00000520868 NPVFQ9HCQ7 196 aa3.92□□□□□ -1.78
PABPC1-216ENST00000520868 ZNF331Q9NQX6 463 aaPredicted RBP3.92□□□□□ -1.78
PABPC1-216ENST00000520868 GSN-AS1Q9NRJ2 163 aa3.92□□□□□ -1.78
PABPC1-216ENST00000520868 CCDC59Q9P031 241 aaKnown RBP3.92□□□□□ -1.78
PABPC1-216ENST00000520868 RABL2AQ9UBK7 228 aaPredicted RBP3.92□□□□□ -1.78
PABPC1-216ENST00000520868 UBR4Q5T4S7 5183 aa3.92□□□□□ -1.78
PABPC1-216ENST00000520868 HMCN2Q8NDA2 5059 aa3.91□□□□□ -1.78
PABPC1-216ENST00000520868 A0A087WTM6 91 aa3.91□□□□□ -1.78
PABPC1-216ENST00000520868 TRGV1A0A0A0MS02 117 aa3.91□□□□□ -1.78
PABPC1-216ENST00000520868 SLC17A3O00476 420 aa3.91□□□□□ -1.78
PABPC1-216ENST00000520868 GOSR2O14653 212 aa3.91□□□□□ -1.78
PABPC1-216ENST00000520868 SSSCA1O60232 199 aa3.91□□□□□ -1.78
PABPC1-216ENST00000520868 IGHV3-53P01767 116 aa3.91□□□□□ -1.78
PABPC1-216ENST00000520868 METTL15P1P0C7V9 234 aa3.91□□□□□ -1.78
PABPC1-216ENST00000520868 FAUP35544 74 aaKnown RBP3.91□□□□□ -1.78
PABPC1-216ENST00000520868 LEPP41159 167 aa3.91□□□□□ -1.78
PABPC1-216ENST00000520868 DAZ2Q13117 558 aaKnown RBP3.91□□□□□ -1.78
PABPC1-216ENST00000520868 BPIFA4PQ86YQ2 179 aa3.91□□□□□ -1.78
PABPC1-216ENST00000520868 TOMM5Q8N4H5 51 aa3.91□□□□□ -1.78
PABPC1-216ENST00000520868 MCFD2Q8NI22 146 aa3.91□□□□□ -1.78
PABPC1-216ENST00000520868 GPN1Q9HCN4 374 aaPredicted RBP3.91□□□□□ -1.78
PABPC1-216ENST00000520868 FUT9Q9Y231 359 aa3.91□□□□□ -1.78
PABPC1-216ENST00000520868 WDR83OSQ9Y284 106 aa3.91□□□□□ -1.78
PABPC1-216ENST00000520868 KLF12Q9Y4X4 402 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms