RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 TENM3Q9P273 2699 aa12.61□□□□□ -0.39
TRAM1-203ENST00000520700 SCO2A0A1W2PP80 73 aa12.6□□□□□ -0.39
TRAM1-203ENST00000520700 H7BYZ3 331 aa12.6□□□□□ -0.39
TRAM1-203ENST00000520700 RBMY1A1P0DJD3 496 aaKnown RBP12.6□□□□□ -0.39
TRAM1-203ENST00000520700 RBMY1CP0DJD4 496 aa12.6□□□□□ -0.39
TRAM1-203ENST00000520700 AKR1C3P42330 323 aa12.6□□□□□ -0.39
TRAM1-203ENST00000520700 RBMY1FQ15415 496 aaKnown RBP12.6□□□□□ -0.39
TRAM1-203ENST00000520700 Q6AWC8 147 aa12.6□□□□□ -0.39
TRAM1-203ENST00000520700 TGP01266 2768 aa12.59□□□□□ -0.39
TRAM1-203ENST00000520700 TRAV34A0A0B4J273 112 aa12.59□□□□□ -0.39
TRAM1-203ENST00000520700 RNASE4P34096 147 aaKnown RBP12.59□□□□□ -0.39
TRAM1-203ENST00000520700 TAS2R60P59551 318 aa12.59□□□□□ -0.39
TRAM1-203ENST00000520700 RAB14P61106 215 aa12.59□□□□□ -0.39
TRAM1-203ENST00000520700 UBE2G1P62253 170 aa12.59□□□□□ -0.39
TRAM1-203ENST00000520700 PRNTQ86SH4 94 aa12.59□□□□□ -0.39
TRAM1-203ENST00000520700 SGK494Q96LW2 274 aa12.59□□□□□ -0.39
TRAM1-203ENST00000520700 NIPSNAP3BQ9BS92 247 aa12.59□□□□□ -0.39
TRAM1-203ENST00000520700 TMEM250H0YL14 139 aa12.58□□□□□ -0.4
TRAM1-203ENST00000520700 LTAP01374 205 aa12.58□□□□□ -0.4
TRAM1-203ENST00000520700 CLLU1Q5K131 121 aa12.58□□□□□ -0.4
TRAM1-203ENST00000520700 PRR9Q5T870 116 aa12.58□□□□□ -0.4
TRAM1-203ENST00000520700 Q86TA4 180 aa12.58□□□□□ -0.4
TRAM1-203ENST00000520700 Q8NAQ8 132 aa12.58□□□□□ -0.4
TRAM1-203ENST00000520700 PYGO2Q9BRQ0 406 aa12.58□□□□□ -0.4
TRAM1-203ENST00000520700 TMEM208Q9BTX3 173 aa12.58□□□□□ -0.4
TRAM1-203ENST00000520700 STAB2Q8WWQ8 2551 aa12.57□□□□□ -0.4
TRAM1-203ENST00000520700 TRAV12-3A0A0B4J271 114 aa12.57□□□□□ -0.4
TRAM1-203ENST00000520700 BTN1A1Q13410 526 aa12.57□□□□□ -0.4
TRAM1-203ENST00000520700 SMUG1Q53HV7 270 aa12.57□□□□□ -0.4
TRAM1-203ENST00000520700 PCNPQ8WW12 178 aaKnown RBP12.57□□□□□ -0.4
TRAM1-203ENST00000520700 LINC01587Q99440 93 aa12.57□□□□□ -0.4
TRAM1-203ENST00000520700 C11orf68Q9H3H3 251 aaKnown RBP12.57□□□□□ -0.4
TRAM1-203ENST00000520700 SMDT1Q9H4I9 107 aa12.57□□□□□ -0.4
TRAM1-203ENST00000520700 J3KRW8 73 aa12.56□□□□□ -0.4
TRAM1-203ENST00000520700 RRN3P1Q2M238 152 aa12.56□□□□□ -0.4
TRAM1-203ENST00000520700 MLST8Q9BVC4 326 aa12.56□□□□□ -0.4
TRAM1-203ENST00000520700 MED9Q9NWA0 146 aa12.56□□□□□ -0.4
TRAM1-203ENST00000520700 IGHV3OR16-12A0A075B7B8 117 aa12.55□□□□□ -0.4
TRAM1-203ENST00000520700 TRAV21A0A0B4J279 112 aa12.55□□□□□ -0.4
TRAM1-203ENST00000520700 TMEM189A5PLL7 270 aa12.55□□□□□ -0.4
TRAM1-203ENST00000520700 RPL35P42766 123 aaKnown RBP12.55□□□□□ -0.4
TRAM1-203ENST00000520700 ANXA2RQ3ZCQ2 193 aa12.55□□□□□ -0.4
TRAM1-203ENST00000520700 TOR2AQ5JU69 321 aa12.55□□□□□ -0.4
TRAM1-203ENST00000520700 ZNF493Q6ZR52 646 aa12.55□□□□□ -0.4
TRAM1-203ENST00000520700 TMEM183AQ8IXX5 376 aa12.55□□□□□ -0.4
TRAM1-203ENST00000520700 C8orf49Q96NF6 230 aa12.55□□□□□ -0.4
TRAM1-203ENST00000520700 EIF5A2Q9GZV4 153 aaKnown RBP12.55□□□□□ -0.4
TRAM1-203ENST00000520700 EDA2RQ9HAV5 297 aa12.55□□□□□ -0.4
TRAM1-203ENST00000520700 IGHV4-28A0A0C4DH34 117 aa12.54□□□□□ -0.4
TRAM1-203ENST00000520700 RGS13O14921 159 aa12.54□□□□□ -0.4
TRAM1-203ENST00000520700 TDRG1Q3Y452 100 aa12.54□□□□□ -0.4
TRAM1-203ENST00000520700 BAGE2Q86Y30 109 aa12.54□□□□□ -0.4
TRAM1-203ENST00000520700 SMIM12Q96EX1 92 aa12.54□□□□□ -0.4
TRAM1-203ENST00000520700 GCGP01275 180 aa12.53□□□□□ -0.4
TRAM1-203ENST00000520700 PFN1P07737 140 aaKnown RBP12.53□□□□□ -0.4
TRAM1-203ENST00000520700 ZNF80P51504 273 aaPredicted RBP12.53□□□□□ -0.4
TRAM1-203ENST00000520700 EIF4E3Q8N5X7 224 aaKnown RBP12.53□□□□□ -0.4
TRAM1-203ENST00000520700 DERL1Q9BUN8 251 aa12.53□□□□□ -0.4
TRAM1-203ENST00000520700 IGHV1OR15-1A0A075B7D0 117 aa12.52□□□□□ -0.41
TRAM1-203ENST00000520700 FABP5P3A8MUU1 101 aa12.52□□□□□ -0.41
TRAM1-203ENST00000520700 ZNF705GA8MUZ8 300 aaPredicted RBP12.52□□□□□ -0.41
TRAM1-203ENST00000520700 SRP19P09132 144 aaKnown RBP12.52□□□□□ -0.41
TRAM1-203ENST00000520700 PEA15Q15121 130 aa12.52□□□□□ -0.41
TRAM1-203ENST00000520700 A0A0J9YWU9 116 aa12.51□□□□□ -0.41
TRAM1-203ENST00000520700 AZU1P20160 251 aa12.51□□□□□ -0.41
TRAM1-203ENST00000520700 CRIP1P50238 77 aa12.51□□□□□ -0.41
TRAM1-203ENST00000520700 ZNF674Q2M3X9 581 aa12.51□□□□□ -0.41
TRAM1-203ENST00000520700 Q6ZQT7 251 aa12.51□□□□□ -0.41
TRAM1-203ENST00000520700 RNASE8Q8TDE3 154 aaKnown RBP12.51□□□□□ -0.41
TRAM1-203ENST00000520700 TMEM263Q8WUH6 116 aaKnown RBP12.51□□□□□ -0.41
TRAM1-203ENST00000520700 C16orf74Q96GX8 76 aa12.51□□□□□ -0.41
TRAM1-203ENST00000520700 ZC2HC1AQ96GY0 325 aa12.51□□□□□ -0.41
TRAM1-203ENST00000520700 TP53TG3Q9ULZ0 132 aa12.51□□□□□ -0.41
TRAM1-203ENST00000520700 PLAC8L1A1L4L8 177 aa12.5□□□□□ -0.41
TRAM1-203ENST00000520700 RAB19A4D1S5 217 aa12.5□□□□□ -0.41
TRAM1-203ENST00000520700 C9JCJ5 164 aa12.5□□□□□ -0.41
TRAM1-203ENST00000520700 IGLV2-8P01709 118 aa12.5□□□□□ -0.41
TRAM1-203ENST00000520700 FAM159AQ6UWV7 190 aa12.5□□□□□ -0.41
TRAM1-203ENST00000520700 KCNS1Q96KK3 526 aa12.5□□□□□ -0.41
TRAM1-203ENST00000520700 TRBV20OR9-2A0A075B6H5 130 aa12.49□□□□□ -0.41
TRAM1-203ENST00000520700 PRM2P04554 102 aa12.49□□□□□ -0.41
TRAM1-203ENST00000520700 GNG4P50150 75 aa12.49□□□□□ -0.41
TRAM1-203ENST00000520700 CENPWQ5EE01 88 aa12.49□□□□□ -0.41
TRAM1-203ENST00000520700 IBA57Q5T440 356 aaKnown RBP12.49□□□□□ -0.41
TRAM1-203ENST00000520700 FAM162BQ5T6X4 162 aa12.49□□□□□ -0.41
TRAM1-203ENST00000520700 PARLQ9H300 379 aa12.49□□□□□ -0.41
TRAM1-203ENST00000520700 TEX48A0A1B0GUV7 120 aa12.48□□□□□ -0.41
TRAM1-203ENST00000520700 C11orf72Q8NBR9 251 aa12.48□□□□□ -0.41
TRAM1-203ENST00000520700 WWC2-AS2Q96NR7 200 aa12.48□□□□□ -0.41
TRAM1-203ENST00000520700 BIN3Q9NQY0 253 aa12.48□□□□□ -0.41
TRAM1-203ENST00000520700 C11orf21Q9P2W6 132 aa12.48□□□□□ -0.41
TRAM1-203ENST00000520700 LY96Q9Y6Y9 160 aa12.48□□□□□ -0.41
TRAM1-203ENST00000520700 CBY3A6NI87 242 aa12.47□□□□□ -0.41
TRAM1-203ENST00000520700 C9JQL5 133 aa12.47□□□□□ -0.41
TRAM1-203ENST00000520700 DEFB4AO15263 64 aa12.47□□□□□ -0.41
TRAM1-203ENST00000520700 HTN1P15515 57 aa12.47□□□□□ -0.41
TRAM1-203ENST00000520700 SRSF3P84103 164 aaKnown RBP12.47□□□□□ -0.41
TRAM1-203ENST00000520700 DAZ2Q13117 558 aaKnown RBP12.47□□□□□ -0.41
TRAM1-203ENST00000520700 FAM74A3Q4VXF1 159 aa12.47□□□□□ -0.41
TRAM1-203ENST00000520700 TRGV11A0A075B6L2 103 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms