RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 OR10J6PQ8NGY7 276 aa8□□□□□ -1.13
PDGFRB-207ENST00000520579 MAP1AP78559 2803 aaPredicted RBP8□□□□□ -1.13
PDGFRB-207ENST00000520579 TRAV26-2A0A0B4J265 109 aa8□□□□□ -1.13
PDGFRB-207ENST00000520579 TMEM155Q4W5P6 130 aa8□□□□□ -1.13
PDGFRB-207ENST00000520579 ORMDL3Q8N138 153 aa8□□□□□ -1.13
PDGFRB-207ENST00000520579 C15orf53Q8NAA6 179 aa8□□□□□ -1.13
PDGFRB-207ENST00000520579 CCL17Q92583 94 aa8□□□□□ -1.13
PDGFRB-207ENST00000520579 V9GYY9 64 aa8□□□□□ -1.13
PDGFRB-207ENST00000520579 A0A1W2PPI3 338 aa8□□□□□ -1.13
PDGFRB-207ENST00000520579 A8MWV9 139 aa8□□□□□ -1.13
PDGFRB-207ENST00000520579 MRPL51Q4U2R6 128 aaKnown RBP8□□□□□ -1.13
PDGFRB-207ENST00000520579 C2orf83Q53S99 150 aa8□□□□□ -1.13
PDGFRB-207ENST00000520579 TMEM133Q9H2Q1 129 aa8□□□□□ -1.13
PDGFRB-207ENST00000520579 TRBV25-1A0A075B6N4 114 aa7.99□□□□□ -1.13
PDGFRB-207ENST00000520579 A0A096LNJ9 63 aa7.99□□□□□ -1.13
PDGFRB-207ENST00000520579 FAM236AA0A1B0GUQ0 79 aa7.99□□□□□ -1.13
PDGFRB-207ENST00000520579 FAM236BA0A1B0GV22 79 aa7.99□□□□□ -1.13
PDGFRB-207ENST00000520579 LINC01548A6NM66 108 aa7.99□□□□□ -1.13
PDGFRB-207ENST00000520579 RPRMLQ8N4K4 120 aa7.99□□□□□ -1.13
PDGFRB-207ENST00000520579 DLX4Q92988 240 aaPredicted RBP7.99□□□□□ -1.13
PDGFRB-207ENST00000520579 IGKV1D-37A0A075B6S9 117 aa7.99□□□□□ -1.13
PDGFRB-207ENST00000520579 E9PLD3 99 aa7.99□□□□□ -1.13
PDGFRB-207ENST00000520579 K7ESF4 209 aa7.99□□□□□ -1.13
PDGFRB-207ENST00000520579 HLA-DMBP28068 263 aa7.99□□□□□ -1.13
PDGFRB-207ENST00000520579 EFNA4P52798 201 aa7.99□□□□□ -1.13
PDGFRB-207ENST00000520579 TINCRA0A1B0GVN0 87 aa7.99□□□□□ -1.13
PDGFRB-207ENST00000520579 SCGB1D4Q6XE38 83 aa7.99□□□□□ -1.13
PDGFRB-207ENST00000520579 MAPKAPK5-AS1Q8N8E1 139 aa7.99□□□□□ -1.13
PDGFRB-207ENST00000520579 C7orf69Q9H7B7 122 aa7.99□□□□□ -1.13
PDGFRB-207ENST00000520579 DMXL1Q9Y485 3027 aa7.99□□□□□ -1.13
PDGFRB-207ENST00000520579 SORL1Q92673 2214 aa7.98□□□□□ -1.13
PDGFRB-207ENST00000520579 A0A1W2PRX2 142 aa7.98□□□□□ -1.13
PDGFRB-207ENST00000520579 WT1P19544 449 aaPredicted RBP7.98□□□□□ -1.13
PDGFRB-207ENST00000520579 TNFAIP6P98066 277 aaPredicted RBP7.98□□□□□ -1.13
PDGFRB-207ENST00000520579 GATD1Q8NB37 220 aa7.98□□□□□ -1.13
PDGFRB-207ENST00000520579 FMC1Q96HJ9 113 aa7.98□□□□□ -1.13
PDGFRB-207ENST00000520579 ZNF256Q9Y2P7 627 aaPredicted RBP7.98□□□□□ -1.13
PDGFRB-207ENST00000520579 C12orf74Q32Q52 190 aa7.98□□□□□ -1.13
PDGFRB-207ENST00000520579 MRAPQ8TCY5 172 aa7.98□□□□□ -1.13
PDGFRB-207ENST00000520579 TMEM158Q8WZ71 300 aa7.98□□□□□ -1.13
PDGFRB-207ENST00000520579 DUX3Q96PT4 197 aa7.98□□□□□ -1.13
PDGFRB-207ENST00000520579 SIGLEC9Q9Y336 463 aa7.98□□□□□ -1.13
PDGFRB-207ENST00000520579 C16orf97H3BN30 126 aa7.98□□□□□ -1.13
PDGFRB-207ENST00000520579 A0A0U1RQV1 116 aa7.97□□□□□ -1.13
PDGFRB-207ENST00000520579 TM4SF5O14894 197 aa7.97□□□□□ -1.13
PDGFRB-207ENST00000520579 CD40P25942 277 aa7.97□□□□□ -1.13
PDGFRB-207ENST00000520579 GAGE2AQ6NT46 116 aa7.97□□□□□ -1.13
PDGFRB-207ENST00000520579 KIR2DL5BQ8NHK3 375 aa7.97□□□□□ -1.13
PDGFRB-207ENST00000520579 BEX4Q9NWD9 120 aaPredicted RBP7.97□□□□□ -1.13
PDGFRB-207ENST00000520579 MRPL35Q9NZE8 188 aaKnown RBP7.97□□□□□ -1.13
PDGFRB-207ENST00000520579 C19orf71A6NCJ1 209 aa7.97□□□□□ -1.13
PDGFRB-207ENST00000520579 SRRM5B3KS81 715 aa7.97□□□□□ -1.13
PDGFRB-207ENST00000520579 SRD5A1P18405 259 aa7.97□□□□□ -1.13
PDGFRB-207ENST00000520579 TEN1Q86WV5 123 aa7.97□□□□□ -1.13
PDGFRB-207ENST00000520579 VKORC1Q9BQB6 163 aa7.97□□□□□ -1.13
PDGFRB-207ENST00000520579 COL5A1P20908 1838 aaPredicted RBP7.97□□□□□ -1.13
PDGFRB-207ENST00000520579 C9orf106Q8NAJ2 232 aa7.96□□□□□ -1.13
PDGFRB-207ENST00000520579 ZNF714Q96N38 554 aa7.96□□□□□ -1.13
PDGFRB-207ENST00000520579 MLST8Q9BVC4 326 aa7.96□□□□□ -1.13
PDGFRB-207ENST00000520579 IGHV1-18A0A0C4DH31 117 aa7.96□□□□□ -1.14
PDGFRB-207ENST00000520579 IGKCP01834 107 aa7.96□□□□□ -1.14
PDGFRB-207ENST00000520579 CRIP1P50238 77 aa7.96□□□□□ -1.14
PDGFRB-207ENST00000520579 NDUFA4L2Q9NRX3 87 aa7.96□□□□□ -1.14
PDGFRB-207ENST00000520579 HAX1O00165 279 aa7.96□□□□□ -1.14
PDGFRB-207ENST00000520579 HLA-DRB4P13762 266 aa7.96□□□□□ -1.14
PDGFRB-207ENST00000520579 RPL27AP46776 148 aaKnown RBP7.96□□□□□ -1.14
PDGFRB-207ENST00000520579 RRN3P1Q2M238 152 aa7.96□□□□□ -1.14
PDGFRB-207ENST00000520579 SLC25A48Q6ZT89 311 aaKnown RBP7.96□□□□□ -1.14
PDGFRB-207ENST00000520579 SLC25A39Q9BZJ4 359 aaPredicted RBP7.96□□□□□ -1.14
PDGFRB-207ENST00000520579 PRSS22Q9GZN4 317 aa7.96□□□□□ -1.14
PDGFRB-207ENST00000520579 HLA-DRB4X5D2U9 266 aa7.96□□□□□ -1.14
PDGFRB-207ENST00000520579 TRAV2A0A0B4J234 112 aa7.95□□□□□ -1.14
PDGFRB-207ENST00000520579 FAM90A9PA6NNJ1 464 aa7.95□□□□□ -1.14
PDGFRB-207ENST00000520579 CDX4O14627 284 aaPredicted RBP7.95□□□□□ -1.14
PDGFRB-207ENST00000520579 SH2D1AO60880 128 aa7.95□□□□□ -1.14
PDGFRB-207ENST00000520579 FOXC1Q12948 553 aa7.95□□□□□ -1.14
PDGFRB-207ENST00000520579 ZNF56Q15929 161 aa7.95□□□□□ -1.14
PDGFRB-207ENST00000520579 VMA21Q3ZAQ7 101 aa7.95□□□□□ -1.14
PDGFRB-207ENST00000520579 ZFP2Q6ZN57 461 aa7.95□□□□□ -1.14
PDGFRB-207ENST00000520579 RPEQ96AT9 228 aa7.95□□□□□ -1.14
PDGFRB-207ENST00000520579 RAXQ9Y2V3 346 aa7.95□□□□□ -1.14
PDGFRB-207ENST00000520579 LINC01549A6NIU2 74 aa7.95□□□□□ -1.14
PDGFRB-207ENST00000520579 LGALS9BQ3B8N2 356 aa7.95□□□□□ -1.14
PDGFRB-207ENST00000520579 LGALS9CQ6DKI2 356 aa7.95□□□□□ -1.14
PDGFRB-207ENST00000520579 CEND1Q8N111 149 aa7.95□□□□□ -1.14
PDGFRB-207ENST00000520579 LRRC75A-AS1Q8N1F1 130 aa7.95□□□□□ -1.14
PDGFRB-207ENST00000520579 PRR7Q8TB68 274 aa7.95□□□□□ -1.14
PDGFRB-207ENST00000520579 CARD19Q96LW7 228 aa7.95□□□□□ -1.14
PDGFRB-207ENST00000520579 RNF7Q9UBF6 113 aa7.95□□□□□ -1.14
PDGFRB-207ENST00000520579 NDUFA7O95182 113 aa7.94□□□□□ -1.14
PDGFRB-207ENST00000520579 FAM104BQ5XKR9 115 aa7.94□□□□□ -1.14
PDGFRB-207ENST00000520579 TRAV8-4A0A0B4J246 113 aa7.94□□□□□ -1.14
PDGFRB-207ENST00000520579 HOXA3O43365 443 aaPredicted RBP7.94□□□□□ -1.14
PDGFRB-207ENST00000520579 ERCC8Q13216 396 aa7.94□□□□□ -1.14
PDGFRB-207ENST00000520579 ANKRD29Q8N6D5 301 aa7.94□□□□□ -1.14
PDGFRB-207ENST00000520579 ZNF492Q9P255 531 aa7.94□□□□□ -1.14
PDGFRB-207ENST00000520579 IGKV3-7A0A075B6H7 116 aa7.94□□□□□ -1.14
PDGFRB-207ENST00000520579 GP9P14770 177 aa7.94□□□□□ -1.14
PDGFRB-207ENST00000520579 RASL10AQ92737 203 aa7.94□□□□□ -1.14
PDGFRB-207ENST00000520579 PROCRQ9UNN8 238 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms