RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 KHDC3LQ587J8 217 aa17.52■□□□□ 0.4
VEGFA-220ENST00000519767 ZNF575Q86XF7 245 aa17.52■□□□□ 0.4
VEGFA-220ENST00000519767 ARPC5LQ9BPX5 153 aa17.52■□□□□ 0.4
VEGFA-220ENST00000519767 UBE2L3P68036 154 aaKnown RBP17.51■□□□□ 0.39
VEGFA-220ENST00000519767 SLAQ13239 276 aa17.51■□□□□ 0.39
VEGFA-220ENST00000519767 PRR9Q5T870 116 aa17.51■□□□□ 0.39
VEGFA-220ENST00000519767 ST6GAL2Q96JF0 529 aa17.51■□□□□ 0.39
VEGFA-220ENST00000519767 LENEPQ9Y5L5 61 aa17.51■□□□□ 0.39
VEGFA-220ENST00000519767 A0A096LPF7 62 aa17.5■□□□□ 0.39
VEGFA-220ENST00000519767 ZNF266Q14584 549 aa17.5■□□□□ 0.39
VEGFA-220ENST00000519767 TP53TG3Q9ULZ0 132 aa17.5■□□□□ 0.39
VEGFA-220ENST00000519767 MUC4Q99102 2169 aa17.49■□□□□ 0.39
VEGFA-220ENST00000519767 Q8TAT8 98 aa17.48■□□□□ 0.39
VEGFA-220ENST00000519767 SMIM3Q9BZL3 60 aa17.48■□□□□ 0.39
VEGFA-220ENST00000519767 C16orf90A8MZG2 172 aa17.47■□□□□ 0.39
VEGFA-220ENST00000519767 DIRC3C9JPN6 131 aa17.47■□□□□ 0.39
VEGFA-220ENST00000519767 PAX4O43316 350 aa17.47■□□□□ 0.39
VEGFA-220ENST00000519767 ZNF415Q09FC8 603 aa17.47■□□□□ 0.39
VEGFA-220ENST00000519767 Q6ZQT7 251 aa17.47■□□□□ 0.39
VEGFA-220ENST00000519767 TMED6Q8WW62 240 aa17.47■□□□□ 0.39
VEGFA-220ENST00000519767 MBD2Q9UBB5 411 aa17.47■□□□□ 0.39
VEGFA-220ENST00000519767 PRO0255Q9UI72 69 aa17.47■□□□□ 0.39
VEGFA-220ENST00000519767 FAM74A1Q5RGS3 127 aa17.46■□□□□ 0.39
VEGFA-220ENST00000519767 ARL6IP6Q8N6S5 226 aa17.46■□□□□ 0.39
VEGFA-220ENST00000519767 OTORQ9NRC9 128 aa17.46■□□□□ 0.39
VEGFA-220ENST00000519767 HHLA3Q9XRX5 114 aa17.46■□□□□ 0.39
VEGFA-220ENST00000519767 ICOSQ9Y6W8 199 aa17.46■□□□□ 0.39
VEGFA-220ENST00000519767 ACOT6Q3I5F7 207 aaPredicted RBP17.45■□□□□ 0.38
VEGFA-220ENST00000519767 Q6AWC8 147 aa17.45■□□□□ 0.38
VEGFA-220ENST00000519767 SPXQ9BT56 116 aa17.45■□□□□ 0.38
VEGFA-220ENST00000519767 KRTAP1-5Q9BYS1 174 aa17.45■□□□□ 0.38
VEGFA-220ENST00000519767 MRPL16Q9NX20 251 aaKnown RBP17.45■□□□□ 0.38
VEGFA-220ENST00000519767 A0A1W2PPV4 95 aa17.44■□□□□ 0.38
VEGFA-220ENST00000519767 PQLC2Q6ZP29 291 aa17.44■□□□□ 0.38
VEGFA-220ENST00000519767 CMTM2Q8TAZ6 248 aa17.44■□□□□ 0.38
VEGFA-220ENST00000519767 HYLS1Q96M11 299 aa17.44■□□□□ 0.38
VEGFA-220ENST00000519767 PGPA6NDG6 321 aa17.43■□□□□ 0.38
VEGFA-220ENST00000519767 MUC21Q5SSG8 566 aa17.43■□□□□ 0.38
VEGFA-220ENST00000519767 FAM159AQ6UWV7 190 aa17.43■□□□□ 0.38
VEGFA-220ENST00000519767 WFDC1Q9HC57 220 aa17.43■□□□□ 0.38
VEGFA-220ENST00000519767 IGHV3-53P01767 116 aa17.42■□□□□ 0.38
VEGFA-220ENST00000519767 CRYBA4P53673 196 aa17.42■□□□□ 0.38
VEGFA-220ENST00000519767 FHL2Q14192 279 aa17.42■□□□□ 0.38
VEGFA-220ENST00000519767 MRPL23Q16540 153 aaKnown RBP17.42■□□□□ 0.38
VEGFA-220ENST00000519767 IQCF2Q8IXL9 164 aa17.42■□□□□ 0.38
VEGFA-220ENST00000519767 MDFICQ9P1T7 246 aa17.42■□□□□ 0.38
VEGFA-220ENST00000519767 TRGV11A0A075B6L2 103 aa17.41■□□□□ 0.38
VEGFA-220ENST00000519767 SIVA1O15304 175 aa17.41■□□□□ 0.38
VEGFA-220ENST00000519767 CDK2AP2O75956 126 aa17.41■□□□□ 0.38
VEGFA-220ENST00000519767 RASL10AQ92737 203 aa17.41■□□□□ 0.38
VEGFA-220ENST00000519767 TDRG1Q3Y452 100 aa17.4■□□□□ 0.38
VEGFA-220ENST00000519767 C8orf49Q96NF6 230 aa17.4■□□□□ 0.38
VEGFA-220ENST00000519767 BATF3Q9NR55 127 aa17.4■□□□□ 0.38
VEGFA-220ENST00000519767 RYR1P21817 5038 aa17.4■□□□□ 0.38
VEGFA-220ENST00000519767 TMEM183BQ1AE95 376 aa17.39■□□□□ 0.37
VEGFA-220ENST00000519767 TMEM183AQ8IXX5 376 aa17.39■□□□□ 0.37
VEGFA-220ENST00000519767 TRGV4A0A0C4DH28 118 aa17.38■□□□□ 0.37
VEGFA-220ENST00000519767 OR10G4Q8NGN3 311 aa17.38■□□□□ 0.37
VEGFA-220ENST00000519767 OR10G9Q8NGN4 311 aa17.38■□□□□ 0.37
VEGFA-220ENST00000519767 OR10G7Q8NGN6 311 aa17.38■□□□□ 0.37
VEGFA-220ENST00000519767 NXPH4O95158 308 aa17.37■□□□□ 0.37
VEGFA-220ENST00000519767 LYPD5Q6UWN5 251 aa17.37■□□□□ 0.37
VEGFA-220ENST00000519767 NEGR1Q7Z3B1 354 aa17.37■□□□□ 0.37
VEGFA-220ENST00000519767 SPATA12Q7Z6I5 190 aa17.37■□□□□ 0.37
VEGFA-220ENST00000519767 RAB2AP61019 212 aa17.36■□□□□ 0.37
VEGFA-220ENST00000519767 GOLT1AQ6ZVE7 132 aa17.36■□□□□ 0.37
VEGFA-220ENST00000519767 TRAV21A0A0B4J279 112 aa17.35■□□□□ 0.37
VEGFA-220ENST00000519767 EIF3GO75821 320 aaKnown RBP eCLIP17.35■□□□□ 0.37
VEGFA-220ENST00000519767 RPH3ALQ9UNE2 315 aa17.35■□□□□ 0.37
VEGFA-220ENST00000519767 ALG5Q9Y673 324 aa17.35■□□□□ 0.37
VEGFA-220ENST00000519767 ORM1P02763 201 aa17.34■□□□□ 0.37
VEGFA-220ENST00000519767 OR2G3Q8NGZ4 309 aa17.34■□□□□ 0.37
VEGFA-220ENST00000519767 ZNF479Q96JC4 524 aa17.34■□□□□ 0.37
VEGFA-220ENST00000519767 TREM1Q9NP99 234 aa17.34■□□□□ 0.37
VEGFA-220ENST00000519767 NAGKQ9UJ70 344 aa17.34■□□□□ 0.37
VEGFA-220ENST00000519767 TRAV9-2A0A087WT02 112 aa17.33■□□□□ 0.36
VEGFA-220ENST00000519767 SERTM2A0A1B0GWG4 89 aa17.33■□□□□ 0.36
VEGFA-220ENST00000519767 M0R2P5 195 aa17.33■□□□□ 0.36
VEGFA-220ENST00000519767 LINC00315P59091 139 aa17.33■□□□□ 0.36
VEGFA-220ENST00000519767 KCNS1Q96KK3 526 aa17.33■□□□□ 0.36
VEGFA-220ENST00000519767 GNRH2O43555 120 aa17.32■□□□□ 0.36
VEGFA-220ENST00000519767 MBP02144 154 aa17.32■□□□□ 0.36
VEGFA-220ENST00000519767 SRIP30626 198 aa17.32■□□□□ 0.36
VEGFA-220ENST00000519767 PCNPQ8WW12 178 aaKnown RBP17.32■□□□□ 0.36
VEGFA-220ENST00000519767 PSMG3Q9BT73 122 aaPredicted RBP17.32■□□□□ 0.36
VEGFA-220ENST00000519767 MED28Q9H204 178 aa17.32■□□□□ 0.36
VEGFA-220ENST00000519767 TRAV4A0A0B4J268 109 aa17.31■□□□□ 0.36
VEGFA-220ENST00000519767 K7EP13 123 aa17.31■□□□□ 0.36
VEGFA-220ENST00000519767 K7EQD1 137 aa17.31■□□□□ 0.36
VEGFA-220ENST00000519767 HMGB3O15347 200 aaKnown RBP17.31■□□□□ 0.36
VEGFA-220ENST00000519767 SFTA3P0C7M3 94 aa17.31■□□□□ 0.36
VEGFA-220ENST00000519767 CDC34P49427 236 aaPredicted RBP17.31■□□□□ 0.36
VEGFA-220ENST00000519767 SERF2P84101 59 aa17.31■□□□□ 0.36
VEGFA-220ENST00000519767 OR4C5Q8NGB2 326 aa17.31■□□□□ 0.36
VEGFA-220ENST00000519767 IGHV3-16A0A0C4DH30 117 aa17.3■□□□□ 0.36
VEGFA-220ENST00000519767 K7EQM0 130 aa17.3■□□□□ 0.36
VEGFA-220ENST00000519767 PTTG1O95997 202 aa17.3■□□□□ 0.36
VEGFA-220ENST00000519767 STAG3L2P0CL84 134 aa17.3■□□□□ 0.36
VEGFA-220ENST00000519767 STAG3L3P0CL85 134 aa17.3■□□□□ 0.36
VEGFA-220ENST00000519767 ARL14EPLP0DKL9 152 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms